| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4848430 | 65 (1.050) | 6 (0.100) | 5/252 | NT | 8.4% | coding (519/684 nt) | PP_4263 | cytochrome biogenesis protein |
| ? | NC_002947 | = 4848483 | 69 (1.180) | coding (572/684 nt) | PP_4263 | cytochrome biogenesis protein | |||||
GCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGCGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4848278‑4848430‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgttcATCCGTTCGGCAGCCAGCCCGGTTGCCAGCAACACCGGCCAGGTGCCCACCCCGAACGCCAGCATCAACCCGGCGCTGTAGCCGGCATTGCCCTGGCTGGCCGCCCACAGCAGGGTGCTGTACACCAGCCCGCACGGCAGCCAGC < NC_002947/4848483‑4848339 GCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGC < 4:354010/149‑1GCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGG < 5:388515/148‑1 GTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGCGT > 2:220758/1‑149 TCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGGCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGCGTT < 1:88996/149‑1 TCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGCGTT < 1:94402/149‑1 CTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGCGTTCATCCGTTCGGCAGCCAGCCCGGT > 3:240891/1‑149 CATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTGTACAGCACCATTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGTTGGTGGCGTTAAACCGTTGGGCCGCCCCCCCGGTTGCCAGCc > 1:107153/1‑147 GCTGCCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGCGTTCATCCGTTCGGCAGCCAGCCCGGTTGCCAGCAACACCGGCCAGGTGCCCACCCCGAACGCCA < 2:26150/149‑1 GCTGCCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGCGTTCATCCGTTCGGCAGCCAGCCCGGTTGCCAGCAACACCGGCCAGGTGCCCACCCCGAACGCCA < 4:240891/149‑1 CCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGCGTTCATCCGTTCGGCAGCCAGCCCGGTTGCCAGCAACACCGGCCAGGTGCCCACCCCGAACGCCAGCA < 5:184309/148‑1 GGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGCGTTCATCCGTTCGGCAGCCAGCCCGGTTGCCAGCAACACCGGCCAGGTGCCCACCCCGAACGCCAGCATCAACCC < 2:107153/149‑1 GTTCATCCGTTCGGCAGCCAGCCCGGTTGCCAGCAACACCGGCCAGGTGCCCACCCCGAACGCCAGCATCAACCCGGCGCTGTAGCCGGCATTGCCCTGGCTGGCCGCCCACAGCAGGGTGCTGTACACCAGCCCGCACGGCAGCCAGC < 4:82407/149‑1 GCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTGTACAGCACC‑CTGCTGTGGGCGGCCAGCCAGGGCAATGCCGGCTACAGCGCCGGGTTGATGCTGGCGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4848278‑4848430‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgttcATCCGTTCGGCAGCCAGCCCGGTTGCCAGCAACACCGGCCAGGTGCCCACCCCGAACGCCAGCATCAACCCGGCGCTGTAGCCGGCATTGCCCTGGCTGGCCGCCCACAGCAGGGTGCTGTACACCAGCCCGCACGGCAGCCAGC < NC_002947/4848483‑4848339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |