New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5269810	61 (0.980)	4 (0.070)	4/260	NT	7.1%	coding (529/1371 nt)	radA	DNA repair enzyme
	?	NC_002947	= 5269874	45 (0.740)					coding (465/1371 nt)	radA	DNA repair enzyme

GGCCAGCCAGCGAGCCCTCCTTGGTCACGTGGCCGACCAGGAAGATTGCCGTACCGCTTTGCTTGGCATAGCGCACCAGCAACGCTGTGCTTTCGCGCACCTGGGCCACGCCGCCCGGGGCCGATTGCAACTGCTCGGTGAAAATGGTCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5269660‑5269810 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgCATCGAGACGATCATTGCCACGGCGCGGGTCGAGAAGCCGCGGGTAATGGTGATCGACTCGATCCAGACCATTTT  <  NC_002947/5269874‑5269800                                                                                                                                                                                                                                    GGCCAGCCAGCGAGCCCTCCTTGGTCACGTGGCCGACCAGGAAGATTGCCGTACCGCTTTGCTTGGCATAGCGCACCAGCAACGCTGTGCTTTCGCGCACCTGGGCCACGCCGCCCGGGGCCGATTGCAACTGCTCGGTGAAAATGGTC                                                                               >  2:94281/1‑149  GCCAGCCAGCGAGCCCTCCTTGGTCACGTGGCCGACCAGGAAGATTGCCGTACCGCTTTGCTTGGCATAGCGCACCAGCAACGCTGTGCTTTCGCGCACCTGGGCCACGCCGCCCGGGGCCGATTGCAACTGCTCGGTGAAAATGGTCT                                                                              <  1:236428/149‑1  GCCAGCCAGCGAGCCCTCCTTGGTCACGTGGCCGACCAGGAAGATTGCCGTACCGCTTTGCTTGGCATAGCGCACCAGCAACGCTGTGCTTTCGCGCACCTGGGCCACGCCGCCCGGGGCCGATTGCAACTGCTCGGTGAAAATGGTCT                                                                              <  3:16868/149‑1                                                               TTGGCATAGCGCACCAGCAACGCTGTGCTTTCGCGCACCTGGGCCACGCCGCCCGGGGCCGATTGCAACTGCTCGGTGAAAATGGTCTGCATCGAGACGATCATTGCCACGGCGCGGGTCGAGAAGCCGCGGGTAATGGTGATCGACTC                 >  5:113551/1‑149                                                                     TAGCGCACCAGCAACGCTGTGCTTTCGCGCACCTGGGCCACGCCGCCCGGGGCCGATTGCAACTGCTCGGTGAAAATGGTCTGCATCGAGACGATCATTGCCACGGCGCGGGTCGAGAAGCCGCGGGTAATGGTGATCGACTCGATC             >  1:197305/1‑147                                                                           ACCAGCAACGCTGTGCTTTCGCGCACCTGGGCCACGCCGCCCGGGGCCGATTGCAACTGCTCGGTGAAAATGGTCTGCATCGAGACGATCATTGCCACGGCGCGGGTCGAGAAGCCGCGGGTAATGGTGATCGACTCGATCCAGACCAT     <  6:113551/149‑1                                                                              AGCAACGCTGTGCTTTCGCGCACCTGGGCCACGCCGCCCGGGGCCGATTGCAACTGCTCGGTGAAAATGGTCTGCATCGAGACGATCATTGCCACGGCGCGGGTCGAGAAGCCGCGGGTAATGGTGATCGACTCGATCCAGACCATTTT  <  2:197305/149‑1                                                                                                                                                                                                                                    GGCCAGCCAGCGAGCCCTCCTTGGTCACGTGGCCGACCAGGAAGATTGCCGTACCGCTTTGCTTGGCATAGCGCACCAGCAACGCTGTGCTTTCGCGCACCTGGGCCACGCCGCCCGGGGCCGATTGCAACTGCTCGGTGAAAATGGTCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5269660‑5269810 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgCATCGAGACGATCATTGCCACGGCGCGGGTCGAGAAGCCGCGGGTAATGGTGATCGACTCGATCCAGACCATTTT  <  NC_002947/5269874‑5269800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.