New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5621818 =	68 (1.100)	4 (0.070)	4/254	NT	5.8%	coding (468/957 nt)	PP_4940	glycosyltransferase
	?	NC_002947	5621863 =	65 (1.100)					coding (423/957 nt)	PP_4940	glycosyltransferase

GCCATGGGCGCGGGTGATCAGCTCCGGCTACATGGTCAGCGAGCGCTTGCGCCAGGAAGGTTTCGACGCGGTGTTCGTGCCCAAGGGCTATGACGAGCAGTTGCTGGCCGACCAAGGGCGTGAGCGTGATATCGAACTGGCCTTTGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5621968‑5621818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGTAATGAGCGCTGAACTTGCCGGTGTACTTGCAC  >  NC_002947/5621863‑5622010                                                                                                                                                                                                                                                                                                             GCCATGGGCGCGGGTGATCAGCGCCGGCTACATGGTCAGCGAGCGCTTGCGCCAGGAAGGTTTCGACGCGGTGTTCGTGCCCAAGGGCTATGACGAGCAGTTGCTGGCCGACCAAGGGCGTGAGCGTGATATCGAACTGGCCTTTGTC                                                                                                                                                         <  7:117879/148‑1                                                                                                         TGGCCGACCAAGGGCGTGAGCGTGATATCGAACTGGCCTTTGTCGGCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCA                                                >  4:170567/1‑149                                                                                                           GCCGACCAAGGGCGTGAGCGTGATATCGAACTGGCCTTTGTCGGCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTG                                                              >  1:220236/1‑133                                                                                                           GCCGACCAAGGGCGTGAGCGTGATATCGAACTGGCCTTTGTCGGCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTG                                                              <  2:220236/133‑1                                                                                                                   AGGGCGTGAGCGTGATATCGAACTGGCCTTTGTCGGCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGG                                      <  3:170567/149‑1                                                                                                                                                  GTCGGCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGTAATGAGCGCTGAACTTGCCGGTGTACT       >  3:55831/1‑149                                                                                                                                                  GTCGGCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGTAATGAGCGCTGAACTTGCCGGTGTAC        <  6:44887/148‑1                                                                                                                                                   TCGGCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGTAATGAGCGCTGAACTTGCCGGTGTACTT      >  2:200073/1‑149                                                                                                                                                     GGCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGTAATGAGCGCTGAACTTGCCGGTGTACTTG     >  2:12861/1‑148                                                                                                                                                     GGCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGTAATGAGCGCTGAACTTGCCG              >  3:305510/1‑139                                                                                                                                                     GGCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGTAATGAGCGCTGAACTTGCCG              <  4:305510/139‑1                                                                                                                                                      GCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGTAATGAGCGCT                        >  7:116953/1‑128                                                                                                                                                      GCCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGTAATGAGCGCT                        <  8:116953/128‑1                                                                                                                                                       CCATCAACTGATAGTAATAGGCCTTGGTCACGAACACCGCGTCTAAACCTTCCTGGCGCAAGCGCTAGCTGACCATGTAGCCGGATCTGATCACCCGCGCCCATGGCAACTGGCTGTAATGAGCGCTGAACTTGCCGGTGTACTTGCAC  <  7:106432/149‑1                                                                                                                                                       CCAGCAACTGCTCGTCATACCCCTTGGCCACGAACACCGCGGCGAAACCTTCCTGGCGCAAGCGCTCGCGGACCATGTCGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGAAATGAGCGCTCAACTTGCCGGTGTACTTGCAC  <  6:4303/149‑1                                                                                                                                                                                                                                                                                                             GCCATGGGCGCGGGTGATCAGCTCCGGCTACATGGTCAGCGAGCGCTTGCGCCAGGAAGGTTTCGACGCGGTGTTCGTGCCCAAGGGCTATGACGAGCAGTTGCTGGCCGACCAAGGGCGTGAGCGTGATATCGAACTGGCCTTTGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5621968‑5621818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcCAGCAACTGCTCGTCATAGCCCTTGGGCACGAACACCGCGTCGAAACCTTCCTGGCGCAAGCGCTCGCTGACCATGTAGCCGGAGCTGATCACCCGCGCCCATGGCAACTGGCGGTAATGAGCGCTGAACTTGCCGGTGTACTTGCAC  >  NC_002947/5621863‑5622010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.