New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	319383 =	52 (0.840)	4 (0.070)	4/260	NT	7.7%	coding (359/1815 nt)	PP_0264	sensor histidine kinase
	?	NC_002947	319427 =	45 (0.740)					coding (315/1815 nt)	PP_0264	sensor histidine kinase

GCGGCAAAGAAGTAGCC‑‑GCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGA  >  NC_002947/319239‑319530                                                                                                                                                   |                                                                                                                                                     tgctcggcaccctgcaccgctacgagaccttgccgcaaattctcggcgacttgccagcgctgcgtggcgtgctggccgcccctttccgcctggaagcggtgaccaccgcccaccgcctgctcaaggacatcgtgcagaagaccggtGcc                                                                                                                                                    <  6:358382‑M1/3‑1 (MQ=255) tgctcggcaccctgcaccgctacgagaccttgccgcaaattctcggcgacttgccagcgctgcgtggcgtgctggccgaccctttccgcctggaagcggtgaccaacgccaaccgcctgctcaaggacatcgtgcagaagaccggtGcc                                                                                                                                                    <  3:302091‑M1/3‑1 (MQ=255)  cgGCAAAGAAGTAGCC‑‑GCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAg                                                                                                                                                 <  5:308779/149‑1 (MQ=255)   ctcggcaccctgcaccgctacgagaccttgccgcaaattctcggcgacttgccagcgctgcgtggcgtgctggccgaccctttccgcctggaagcggtgaccaacgccaaccgcctgctcaaggacatcgtgcagaagaccggtGcc                                                                                                                                                    >  2:354233‑M1/145‑147 (MQ=255)    gCAAAGAAGTATCCCTGCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAg                                                                                                                                                 <  1:328827/149‑1 (MQ=255)                    gcgcTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGt                                                                                                                                 <  6:169569/149‑1 (MQ=255)                      gcTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTcc                                                                                                                               <  5:129612/149‑1 (MQ=255)                      acgagaccttgccgcaaattctcggcgacttgccagcgctgcgtggcgtgctggccgaccctttccgcctggaagcggtgaccaacgccaaccacctgctcaaggacatcgtgcagaagaccggtGCCAAGGTGTTGCCGCTGACGTc                                                                                                                                <  8:361228‑M1/23‑1 (MQ=255)                          ggCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATc                                                                                                                            <  7:348925/148‑1 (MQ=255)                           gCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCa                                                                                                                           <  7:345038/148‑1 (MQ=255)                           gCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAg                                                                                                                          <  5:144964/149‑1 (MQ=255)                           gCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGACCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCa                                                                                                                           <  2:311104/148‑1 (MQ=255)                            ccGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAgg                                                                                                                         >  2:142016/1‑149 (MQ=255)                             cGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGCGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAgg                                                                                                                         >  8:140952/1‑148 (MQ=255)                             cGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGGCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGt                                                                                                                        <  4:292887/149‑1 (MQ=255)                                    gtgCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCa                                                                                                                  <  1:139024/148‑1 (MQ=255)                                      gCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCt                                                                                                               >  2:218755/1‑149 (MQ=255)                                       cccTGACCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTc                                                                                                              <  1:135904/149‑1 (MQ=255)                                       attctcggcgacttgccagcgctgcgtggcgtgctggccgaccctttccgcctggaagcggtgaccaacgccaaccacctgctcaaggacatcgtgcagaagaccggtGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTc                                                                                                              >  7:361228‑M1/109‑149 (MQ=255)                                              cGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTcc                                                                                                                               <  1:56059/125‑1 (MQ=255)                                              cGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTcc                                                                                                                               >  2:56059/1‑125 (MQ=255)                                               gaagaaGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCgg                                                                                                      >  6:108669/1‑149 (MQ=255)                                                   ttgccagcgctgcgtggcgtgctggccgaccctttccgcctggaagcggtgaccaacgccaacggcctgctcaaggacatcgtgcagaagaccggtGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCAcc                                                                                                        <  6:279301‑M1/47‑1 (MQ=255)                                                   ttgccagcgctgcgtggcgtgctggccgaccctttccgcctggaagcggtgaccaacgccaaccgcctgctcaaggacatcgtgcagaagaccggtGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCAcc                                                                                                        >  5:279301‑M1/97‑143 (MQ=255)                                                   aagCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCg                                                                                                       >  2:217868/1‑144 (MQ=255)                                                   aagCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCg                                                                                                       <  1:217868/144‑1 (MQ=255)                                                         ccAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCAc                                                                                            >  3:224325/1‑149 (MQ=255)                                                             ggTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATg                                                                                        >  1:40033/1‑149 (MQ=255)                                                              gTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGt                                                                                       >  2:319689/1‑149 (MQ=255)                                                                      ccATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAg                                                                                >  2:225583/1‑148 (MQ=255)                                                                      ccATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGc                                                                               <  1:225583/149‑1 (MQ=255)                                                                                gTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTg                                                                      <  1:187499/148‑1 (MQ=255)                                                                                   gAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCg                                                                   <  8:292108/148‑1 (MQ=255)                                                                                    aaGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGtt                                                                 >  7:173763/1‑149 (MQ=255)                                                                                    aaGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGtt                                                                 >  3:15894/1‑149 (MQ=255)                                                                                    aaGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGtt                                                                 >  6:79412/1‑149 (MQ=255)                                                                                     aGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTg                                                                <  1:2968/149‑1 (MQ=255)                                                                                     aGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTg                                                                <  5:108669/149‑1 (MQ=255)                                                                                      gTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTgg                                                               >  6:358904/1‑149 (MQ=255)                                                                                              ggAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑Ct                                                      <  4:15894/149‑1 (MQ=255)                                                                                                    cGAAGTTTCGGCTGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAgg                                                >  4:234882/1‑149 (MQ=255)                                                                                                     gAAGTTGCGGCCGACGAAGCTGTCGTGCGTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGc                                               <  3:82298/149‑1 (MQ=255)                                                                                                           tCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGaaa                                          <  2:98595/148‑1 (MQ=255)                                                                                                           tCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGaaa                                          <  2:40033/148‑1 (MQ=255)                                                                                                             ggCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAgg                                        <  1:142016/148‑1 (MQ=255)                                                                                                               ccGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTc                                     >  2:222456/1‑149 (MQ=255)                                                                                                                 gacgaAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCgg                                   >  3:369299/1‑149 (MQ=255)                                                                                                                      aGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAg                               >  1:199452/1‑148 (MQ=255)                                                                                                                       gCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACGG‑CTTCCAGGCGGAAAGGGTCGGCCAGca                             <  1:218755/149‑1 (MQ=255)                                                                                                                          gTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGcacgc                          >  4:26182/1‑149 (MQ=255)                                                                                                                             gTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGcacgccac                       >  6:367688/1‑149 (MQ=255)                                                                                                                             gTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGcacgccac                       >  2:320576/1‑149 (MQ=255)                                                                                                                                 ttGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAg                   <  8:173763/149‑1 (MQ=255)                                                                                                                                   gTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAgcg                 >  7:87466/1‑149 (MQ=255)                                                                                                                                      ccAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑GTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTg              >  5:328843/1‑149 (MQ=255)                                                                                                                                      ccAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTg              >  2:270824/1‑149 (MQ=255)                                                                                                                                      ccAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTg              >  2:214468/1‑149 (MQ=255)                                                                                                                                        aGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCGTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTgg             >  4:302091/1‑148 (MQ=255)                                                                                                                                         gTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCGCCTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGc            <  1:270824/149‑1 (MQ=255)                                                                                                                                                  ggcCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAgg                                        >  2:339878/1‑111 (MQ=255)                                                                                                                                                  ggcCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAgg                                        <  1:339878/111‑1 (MQ=255)                                                                                                                                                  ggcCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCga  <  7:140952/149‑1 (MQ=255)                                                                                                                                                   GCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGcc    <  1:142759‑M1/146‑1 (MQ=255)                                                                                                                                                   GCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGcc    <  5:294478‑M1/146‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     GCGGCAAAGAAGTAGCC‑‑GCGCTTGGCCGAGGTGGTGCCCTGGCCGAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGA  >  NC_002947/319239‑319530

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.