New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	319383 =	52 (0.840)	4 (0.070)	4/260	NT	7.7%	coding (359/1815 nt)	PP_0264	sensor histidine kinase
	?	NC_002947	319427 =	45 (0.740)					coding (315/1815 nt)	PP_0264	sensor histidine kinase

GAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAGGTCTCGTAGCGGTGCAGGGTGCCGAGCA  >  NC_002947/319283‑319572                                                                                                                                                 |                                                                                                                                                   gaagaaGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCgg                                                                                                                                                >  6:108669/1‑149 (MQ=255)     ttgccagcgctgcgtggcgtgctggccgaccctttccgcctggaagcggtgaccaacgccaacggcctgctcaaggacatcgtgcagaagaccggtGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCAcc                                                                                                                                                  <  6:279301‑M1/47‑1 (MQ=255)     ttgccagcgctgcgtggcgtgctggccgaccctttccgcctggaagcggtgaccaacgccaaccgcctgctcaaggacatcgtgcagaagaccggtGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCAcc                                                                                                                                                  >  5:279301‑M1/97‑143 (MQ=255)     aagCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCg                                                                                                                                                 >  2:217868/1‑144 (MQ=255)     aagCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCg                                                                                                                                                 <  1:217868/144‑1 (MQ=255)           ccAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCAc                                                                                                                                      >  3:224325/1‑149 (MQ=255)               ggTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATg                                                                                                                                  >  1:40033/1‑149 (MQ=255)                gTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGt                                                                                                                                 >  2:319689/1‑149 (MQ=255)                        ccATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAg                                                                                                                          >  2:225583/1‑148 (MQ=255)                        ccATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGc                                                                                                                         <  1:225583/149‑1 (MQ=255)                                  gTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTg                                                                                                                <  1:187499/148‑1 (MQ=255)                                     gAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCg                                                                                                             <  8:292108/148‑1 (MQ=255)                                      aaGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGtt                                                                                                           >  3:15894/1‑149 (MQ=255)                                      aaGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGtt                                                                                                           >  7:173763/1‑149 (MQ=255)                                      aaGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGtt                                                                                                           >  6:79412/1‑149 (MQ=255)                                       aGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTg                                                                                                          <  5:108669/149‑1 (MQ=255)                                       aGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTg                                                                                                          <  1:2968/149‑1 (MQ=255)                                        gTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTgg                                                                                                         >  6:358904/1‑149 (MQ=255)                                                ggAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑Ct                                                                                                <  4:15894/149‑1 (MQ=255)                                                      cGAAGTTTCGGCTGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAgg                                                                                          >  4:234882/1‑149 (MQ=255)                                                       gAAGTTGCGGCCGACGAAGCTGTCGTGCGTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGc                                                                                         <  3:82298/149‑1 (MQ=255)                                                             tCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGaaa                                                                                    <  2:40033/148‑1 (MQ=255)                                                             tCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGaaa                                                                                    <  2:98595/148‑1 (MQ=255)                                                               ggCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAgg                                                                                  <  1:142016/148‑1 (MQ=255)                                                                 ccGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTc                                                                               >  2:222456/1‑149 (MQ=255)                                                                   gacgaAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCgg                                                                             >  3:369299/1‑149 (MQ=255)                                                                        aGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAg                                                                         >  1:199452/1‑148 (MQ=255)                                                                         gCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACGG‑CTTCCAGGCGGAAAGGGTCGGCCAGca                                                                       <  1:218755/149‑1 (MQ=255)                                                                            gTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGcacgc                                                                    >  4:26182/1‑149 (MQ=255)                                                                               gTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGcacgccac                                                                 >  2:320576/1‑149 (MQ=255)                                                                               gTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGcacgccac                                                                 >  6:367688/1‑149 (MQ=255)                                                                                   ttGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAg                                                             <  8:173763/149‑1 (MQ=255)                                                                                     gTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAgcg                                                           >  7:87466/1‑149 (MQ=255)                                                                                        ccAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑GTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTg                                                        >  5:328843/1‑149 (MQ=255)                                                                                        ccAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTg                                                        >  2:270824/1‑149 (MQ=255)                                                                                        ccAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTg                                                        >  2:214468/1‑149 (MQ=255)                                                                                          aGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCGTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTgg                                                       >  4:302091/1‑148 (MQ=255)                                                                                           gTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCGCCTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGc                                                      <  1:270824/149‑1 (MQ=255)                                                                                                  ggtgccgaggtgatgtacctgatggacgtcagcggcaacaccttggcACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCaa                                                    >  5:279301‑M2/48‑143 (MQ=255)                                                                                                  ggtgccgaggtgatgtacctgatggacgtcagcggcaacaccttggcACCGGTCTTCTGCACGATGTCCTTGAGCAGGCCGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCaa                                                    <  6:279301‑M2/96‑1 (MQ=255)                                                                                                    ggcCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAgg                                                                                  >  2:339878/1‑111 (MQ=255)                                                                                                    ggcCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAgg                                                                                  <  1:339878/111‑1 (MQ=255)                                                                                                    ggcCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCga                                            <  7:140952/149‑1 (MQ=255)                                                                                                     GCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGcc                                              <  1:142759‑M1/146‑1 (MQ=255)                                                                                                     GCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGcc                                              <  5:294478‑M1/146‑1 (MQ=255)                                                                                                      CCAAGGTGTTGCCGCTGACGTCCATCAGGTAGATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGaaa                                                                                    <  2:70998‑M1/107‑1 (MQ=255)                                                                                                      CCAAGGTGTTGCCGCTGACGTCCATCAGGTAGATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGaaa                                                                                    >  1:70998‑M1/1‑107 (MQ=255)                                                                                                       CAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGaa                                         >  4:224325‑M1/1‑149 (MQ=255)                                                                                                       CAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGaa                                         <  2:242728‑M1/149‑1 (MQ=255)                                                                                                       CAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGaa                                         <  1:33608‑M1/149‑1 (MQ=255)                                                                                                       CAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGaa                                         <  7:211032‑M1/149‑1 (MQ=255)                                                                                                        gaggtgatgtacctgatggacgtcagcggcaacaccttggcACCGGTCTTCTGCACGATGTCCTTGAGCAGGTGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAAt                                        >  7:361228‑M2/42‑149 (MQ=255)                                                                                                             gtTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCg                                   >  3:269856/1‑149 (MQ=255)                                                                                                              ttGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCg                                   <  5:367688/148‑1 (MQ=255)                                                                                                                 ccGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCaa                               <  4:369299/149‑1 (MQ=255)                                                                                                                  cGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAg                              <  3:26182/149‑1 (MQ=255)                                                                                                                         gTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAGGTCTCg                        >  4:285010/1‑148 (MQ=255)                                                                                                                          gacgtcagcggcaacaccttggcACCGGTCTTCTGCACGATGTCCTTGAGCAGGTGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAGGTCTCGt                       <  8:361228‑M2/125‑1 (MQ=255)                                                                                                                             aTCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGACGCCGAGAATTTGCGGCAAGGTCTCGTAGCg                   >  8:50468/1‑149 (MQ=255)                                                                                                                                 ggTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAGGTCTCGTAGCGGTGc               <  5:79412/149‑1 (MQ=255)                                                                                                                                 ggTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGCTATTGGTCTAAA‑TTTTCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAGGTCTCGTAGCGGTGc               <  1:320576/149‑1 (MQ=255)                                                                                                                                     cATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAGGTCTCGTAGCGGTGCAggg           >  2:243380/1‑149 (MQ=255)                                                                                                                                              ggcACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAGGTCTCGTAGCGGTGCAGGGTGCCGAg    >  2:354233‑M2/4‑147 (MQ=255)                                                                                                                                              ggcACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAGGTCTCGTAGCGGTGCAGGGTGCCGAGCa  <  3:302091‑M2/146‑1 (MQ=255)                                                                                                                                              ggcACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTGGGCGGTGGTCACCG‑CTTCCAGGCGGAAAGGGGCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAGGTCTCGTAGCGGTGCAGGGTGCCGAGCa  <  6:358382‑M2/146‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                   GAAGAAGCGGCCAAGGTGGCCGGCCATGGCTTCGTTGAAGTAAGGGCGGAAGGCGAAGTTTCGGCCGACGAAGCTGTCGTGCTTGTCCCAGTTCGAGGCGGCCAAGGTGTTGCCGCTGACGTCCATCAGGTACATCACCTCGGCACCGGTCTTCTGCACGATGTCCTTGAGCAGGCGGTTGGCGTTGGTCACCG‑CTTCCAGGCGGAAAGGGTCGGCCAGCACGCCACGCAGCGCTGGCAAGTCGCCGAGAATTTGCGGCAAGGTCTCGTAGCGGTGCAGGGTGCCGAGCA  >  NC_002947/319283‑319572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.