New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 654882	52 (0.840)	4 (0.070)	3/256	NT	7.2%	intergenic (‑140/+105)	ctpL/PP_0563	methyl‑accepting chemotaxis protein CtpL/two‑component system response regulator
	?	NC_002947	= 654958	53 (0.890)					intergenic (‑216/+29)	ctpL/PP_0563	methyl‑accepting chemotaxis protein CtpL/two‑component system response regulator

CGCATAGCCGCGAACTTCCTGCGCAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTT  >  NC_002947/654738‑655028                                                                                                                                                  |                                                                                                                                                    cgcATAGCCGCGAACTTCCTGCGCAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCgg                                                                                                                                                 <  8:66452/149‑1 (MQ=255) cgcATAGCCGCGAACTTCCTGCGCAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCgg                                                                                                                                                 <  2:122448/149‑1 (MQ=255)  ccATAGCCGCGAACTTCCTGCGCAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATATTGTGACGGGCTGATGACGCCA‑GGCGCTAGGTGTCAGAAAAAAAGTGGCACAGTGACTCCATTGCTGTGGCCGGCACTGGCCTCTACGCggg                                                                                                                                                >  4:141272/2‑149 (MQ=255)   cATAGCCGCGAACTTCCTGCGCAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGc                                                                                                                                               >  5:92922/1‑149 (MQ=255)       gCCGCGAACTTCCTGCGCAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGc                                                                                                                                           <  2:15667/149‑1 (MQ=255)        ccGCGAACTTCCTGCGCAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGcc                                                                                                                                          <  7:115703/149‑1 (MQ=255)                  ccTGCGCAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCcac                                                                                                                                 <  8:112477/148‑1 (MQ=255)                    tGCGCAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑Agg                                                                                                                             >  6:349571/1‑149 (MQ=255)                     gcgcAGGGGAGAGGTAGGCGCCTGAAGTTTTTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGt                                                                                                                            >  6:70999/1‑149 (MQ=255)                     gcgcAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGt                                                                                                                            >  3:72342/1‑149 (MQ=255)                      cgcAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTTGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGtt                                                                                                                           <  2:265707/149‑1 (MQ=255)                      cgcAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑Agg                                                                                                                             <  4:285812/147‑1 (MQ=255)                      cgcAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑Agg                                                                                                                             <  6:143429/147‑1 (MQ=255)                      cgcAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑Agg                                                                                                                             <  7:320333/147‑1 (MQ=255)                      cgcAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGt                                                                                                                            <  6:92922/148‑1 (MQ=255)                       gcAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGttt                                                                                                                          <  5:349571/149‑1 (MQ=255)                          ggggAGAGGTAGGCGCCTGAAGTTTTTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTAcc                                                                                                                       <  3:141272/149‑1 (MQ=255)                                agGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAg                                                                                                                  <  4:138936/148‑1 (MQ=255)                                  gTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACt                                                                                                               >  5:161081/1‑149 (MQ=255)                                  gTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGCGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTGCGCGGGCTTGCCCGCTCCCAC‑ACGTTTACCTCCAGCCt                                                                                                               >  2:383351/1‑149 (MQ=255)                                     ggCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGa                                                                                                            <  4:72342/149‑1 (MQ=255)                                     ggCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGa                                                                                                            <  2:388836/149‑1 (MQ=255)                                      gcgcCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCAGGGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGa                                                                                                            <  6:169219/149‑1 (MQ=255)                                      gcgcCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAg                                                                                                           >  4:133582/1‑149 (MQ=255)                                      gcgcCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAg                                                                                                           <  3:221716/149‑1 (MQ=255)                                      gcgcCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAg                                                                                                           <  7:356059/149‑1 (MQ=255)                                          cTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTAt                                                                                                       <  6:185465/149‑1 (MQ=255)                                             aaGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTAtgtg                                                                                                    <  6:161081/149‑1 (MQ=255)                                             aaGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCAAGTCTGGAGGTaaac                                                                                                     <  5:287236/148‑4 (MQ=255)                                               gTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGa                                                                                                   >  8:356913/1‑148 (MQ=255)                                                      cGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTg                                                                                           <  2:90690/149‑1 (MQ=255)                                                                aCGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGGAATGCCTGGGGAAGCggg                                                                                 >  7:157078/1‑149 (MQ=255)                                                                           aCGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTg                                                                       <  8:310898‑M2/148‑2 (MQ=255)                                                                             gCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCATCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTg                                                                       <  2:334820‑M2/146‑2 (MQ=255)                                                                               cA‑GGGGCTTGGTGTCAGAAAAAACGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCacaggctcgcccgcttccccaggcatttcacatacctcaagtctggaggtaaacctgtgggagcgggcaagcccgcgaagag                                                                   <  5:302035‑M1/149‑83 (MQ=255)                                                                               cA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCacaggctcgcccgcttccccaggcatttcacatacctcaagtctggaggtaaacctgtgggagcgggcaagcccgcgaagag                                                                   <  5:41925‑M1/149‑83 (MQ=255)                                                                               cA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTgaagaa                                                                  <  3:59256/149‑1 (MQ=255)                                                                                  ggggCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGc                                                                >  2:291664/1‑149 (MQ=255)                                                                                     gCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCgg                                                             >  6:292312/1‑149 (MQ=255)                                                                                      cTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGGAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGc                                                            <  8:157078/149‑1 (MQ=255)                                                                                          gtgtCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCg                                                        >  3:188770/1‑149 (MQ=255)                                                                                           tgtCAGAAAAAAAGTCGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGt                                                       <  3:59456/149‑1 (MQ=255)                                                                                               aGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCacaggctcgcccgcttccccaggcatttcacatacctcaagtctggaggtaaacctgtgggagcgggcaagcccgc                                                                         <  4:319986‑M1/128‑77 (MQ=255)                                                                                               aGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCacaggctcgcccgcttccccaggcatttcacatacctcaaggctggaggtaaacctgtgggagcgggcaagcccgc                                                                         >  3:319986‑M1/1‑52 (MQ=255)                                                                                                  aaaaaaGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCg                                                <  5:70999/149‑1 (MQ=255)                                                                                                        gTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACAGTGAGTGCGAAttt                                           >  7:190917/1‑148 (MQ=255)                                                                                                           gCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAg                                        <  3:133582/148‑1 (MQ=255)                                                                                                            cacaGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTTCCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAtgg                                      <  3:174940/149‑1 (MQ=255)                                                                                                            cacaGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCCGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAggg                                      <  5:332803/149‑1 (MQ=255)                                                                                                             acaGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCACTAGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAggg                                      >  1:306287/1‑149 (MQ=255)                                                                                                                 tGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTa                                 <  6:391240/149‑1 (MQ=255)                                                                                                                       attgggTGTGGCCGGCAGTGGCCGCTTGGCGGGCTTGCCGGGTCCCAC‑TGGTTTACCACATTAATTCTGGTTGGTTAATTGCGGGGGGACGCGGGGTAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACacgaa                           <  1:291664/145‑1 (MQ=255)                                                                                                                           ggTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACacgaacga                        <  2:306287/148‑1 (MQ=255)                                                                                                                           ggTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAacgac                       >  8:150700/1‑149 (MQ=255)                                                                                                                               tgGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCaa                   >  5:292506/1‑149 (MQ=255)                                                                                                                               tgGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCaa                   <  5:292312/149‑1 (MQ=255)                                                                                                                                 gCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAAtt                 >  4:29726/1‑149 (MQ=255)                                                                                                                                 gCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAAtt                 <  7:356913/149‑1 (MQ=255)                                                                                                                                   cGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTgc               >  8:150300/1‑149 (MQ=255)                                                                                                                                         tGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTg         >  3:191672/1‑149 (MQ=255)                                                                                                                                             ctctTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTgaagaggccagtgccggccacaccaatggaggcactgtgccactttttttctgacaccaagcccctg     <  5:41925‑M2/149‑68 (MQ=255)                                                                                                                                             ctctTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTgaagaggccagtgccggccacaccaatggaggcactgtgccacgttttttctgacaccaagcccctg     <  5:302035‑M2/149‑68 (MQ=255)                                                                                                                                             ctctTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATg     >  1:210464/1‑149 (MQ=255)                                                                                                                                                  cgcgGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCtt  <  6:292506/147‑1 (MQ=255)                                                                                                                                                  cgcgGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCtt  <  1:334820/147‑1 (MQ=255)                                                                                                                                                  cacaggctcgcccgcttccccaggcatttcacatacctcaagtctggaggtaaacctgtgggagcgggcaagcccgcgaagatgccagtgccggccacaccaatggaggcactgtgccactttttttctgacaccaagcccctggc    <  2:334820‑M1/146‑146 (MQ=255)                                                                                                                                                  cacaggctcgcccgcttccccaggcatttcacatacctcaagtctggaggtaaacctgtgggagcgggcaagcccgcgaagaggccagtgccggccacaccaatggaggcactgtgccactttttttctgacaccaagcccctggcgt  <  8:310898‑M1/148‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CGCATAGCCGCGAACTTCCTGCGCAGGGGAGAGGTAGGCGCCTGAAGTTATTGCGATTTTGTGACGGGGTGATGACGCCA‑GGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTT  >  NC_002947/654738‑655028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.