New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 654882	52 (0.840)	4 (0.070)	3/256	NT	7.2%	intergenic (‑140/+105)	ctpL/PP_0563	methyl‑accepting chemotaxis protein CtpL/two‑component system response regulator
	?	NC_002947	= 654958	53 (0.890)					intergenic (‑216/+29)	ctpL/PP_0563	methyl‑accepting chemotaxis protein CtpL/two‑component system response regulator

ACGCCAGGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGTGCATCCAGCCCCTCGTCCAGTTGCACCACCCCG  >  NC_002947/654812‑655104                                                                                                                                                    |                                                                                                                                                   aCGCCAGGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTg                                                                                                                                                   <  8:310898‑M2/148‑2 (MQ=255)   gCCAGGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCATCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTg                                                                                                                                                   <  2:334820‑M2/146‑2 (MQ=255)     cAGGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTgaagaa                                                                                                                                              <  3:59256/149‑1 (MQ=255)       ggggCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGc                                                                                                                                            >  2:291664/1‑149 (MQ=255)          gCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCgg                                                                                                                                         >  6:292312/1‑149 (MQ=255)           cTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGGAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGc                                                                                                                                        <  8:157078/149‑1 (MQ=255)               gtgtCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCg                                                                                                                                    >  3:188770/1‑149 (MQ=255)                tgtCAGAAAAAAAGTCGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGt                                                                                                                                   <  3:59456/149‑1 (MQ=255)                       aaaaaaGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCg                                                                                                                            <  5:70999/149‑1 (MQ=255)                             gTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACAGTGAGTGCGAAttt                                                                                                                       >  7:190917/1‑148 (MQ=255)                                gCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAg                                                                                                                    <  3:133582/148‑1 (MQ=255)                                 cacaGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTTCCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAtgg                                                                                                                  <  3:174940/149‑1 (MQ=255)                                 cacaGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCCGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAggg                                                                                                                  <  5:332803/149‑1 (MQ=255)                                  acaGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCACTAGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAggg                                                                                                                  >  1:306287/1‑149 (MQ=255)                                      tGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTa                                                                                                             <  6:391240/149‑1 (MQ=255)                                            attgggTGTGGCCGGCAGTGGCCGCTTGGCGGGCTTGCCGGGTCCCAC‑TGGTTTACCACATTAATTCTGGTTGGTTAATTGCGGGGGGACGCGGGGTAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACacgaa                                                                                                       <  1:291664/145‑1 (MQ=255)                                                ggTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACacgaacga                                                                                                    <  2:306287/148‑1 (MQ=255)                                                ggTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAacgac                                                                                                   >  8:150700/1‑149 (MQ=255)                                                    tgGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCaa                                                                                               >  5:292506/1‑149 (MQ=255)                                                    tgGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCaa                                                                                               <  5:292312/149‑1 (MQ=255)                                                      gCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAAtt                                                                                             <  7:356913/149‑1 (MQ=255)                                                      gCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAAtt                                                                                             >  4:29726/1‑149 (MQ=255)                                                        cGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTgc                                                                                           >  8:150300/1‑149 (MQ=255)                                                              tGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTg                                                                                     >  3:191672/1‑149 (MQ=255)                                                                  ctctTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTgaagaggccagtgccggccacaccaatggaggcactgtgccactttttttctgacaccaagcccctg                                                                                 <  5:41925‑M2/149‑68 (MQ=255)                                                                  ctctTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTgaagaggccagtgccggccacaccaatggaggcactgtgccacgttttttctgacaccaagcccctg                                                                                 <  5:302035‑M2/149‑68 (MQ=255)                                                                  ctctTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATg                                                                                 >  1:210464/1‑149 (MQ=255)                                                                       cgcgGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCtt                                                                              <  1:334820/147‑1 (MQ=255)                                                                       cgcgGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCtt                                                                              <  6:292506/147‑1 (MQ=255)                                                                        gcgGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGCCTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTgaagaggccagtgccggccacaccaatggaggcactgtgccactttttttct                                                                                                >  3:319986‑M2/1‑76 (MQ=255)                                                                        gcgGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTgaagaggccagtgccggccacaccaatggaggcactgtgccactttttttct                                                                                                <  4:319986‑M2/128‑53 (MQ=255)                                                                        gcgGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGc                                                                           >  4:349926/1‑149 (MQ=255)                                                                            gCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCgg                                                                       >  7:321414/1‑149 (MQ=255)                                                                                gCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTTCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTa                                                                     <  1:301621/147‑1 (MQ=255)                                                                                gCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTa                                                                     >  6:239089/1‑147 (MQ=255)                                                                                        ccAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGaa                                                                                                                          >  4:344158/1‑86 (MQ=255)                                                                                        ccAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGaa                                                                                                                          <  3:344158/86‑1 (MQ=255)                                                                                               gTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCt                                                     >  2:10495/1‑149 (MQ=255)                                                                                                tttACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTg                                                    <  4:188770/149‑1 (MQ=255)                                                                                                catACCTCAAGTCTGGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTg                                                    >  5:26124/3‑149 (MQ=255)                                                                                                  tACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGc                                                   <  7:310898/148‑1 (MQ=255)                                                                                                   aCCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGccc                                                                         <  7:121851/125‑1 (MQ=255)                                                                                                   aCCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGccc                                                                         >  8:121851/1‑125 (MQ=255)                                                                                                       ccAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGc                                             >  4:212164/1‑149 (MQ=255)                                                                                                       ccAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGACTGTGAAGAAGCCGCCACCGTGAGTGCGAATTACAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTgg                                              >  3:258462/1‑148 (MQ=255)                                                                                                        cAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGcc                                            <  8:321414/149‑1 (MQ=255)                                                                                                        cAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGcc                                            <  1:61478/149‑1 (MQ=255)                                                                                                        cAGACTTGAGGTATCTGAAATCCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGCCTCAACACGAACGACGCAATTGCGACCTGAAGGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACAGGc                                             >  6:311001/1‑148 (MQ=255)                                                                                                                aGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCa                                     <  3:349926/148‑1 (MQ=255)                                                                                                                  gTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGt                                   <  1:259974/148‑1 (MQ=255)                                                                                                                  gTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGt                                   >  2:259974/1‑148 (MQ=255)                                                                                                                   tATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGTGc                                 <  7:150300/149‑1 (MQ=255)                                                                                                                       tgAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGTGCATc                              >  5:310691/1‑148 (MQ=255)                                                                                                                         aaaTGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGt                                   >  5:78942/1‑141 (MQ=255)                                                                                                                         aaaTGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGt                                   <  6:78942/141‑1 (MQ=255)                                                                                                                          aaTGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGTGCATCCAGc                          <  3:212164/149‑1 (MQ=255)                                                                                                                                     aaGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGCTCAGTGCAGCCAGCCCCTCGTCCAg               >  6:302399/1‑149 (MQ=255)                                                                                                                                       gCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGTGCATCCAGCCCCTCGTCCAGtt             >  5:220253/1‑149 (MQ=255)                                                                                                                                           gCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACTACGCAATTGCGCCCTGCATGCTTGGACCCGTACAGCGCCTCGTCCGCTGCACAGGCCATGGTCAGTGCATCCAGCCCCTCGTCCAGATGccc         >  4:230410/1‑147 (MQ=255)                                                                                                                                           gCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGTGc                                 >  3:364457/1‑125 (MQ=255)                                                                                                                                           gCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGTGc                                 <  4:364457/125‑1 (MQ=255)                                                                                                                                                ccTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGTGCATCCAGCCCCTCGTCCAGTTGCACCAccc    >  2:322436/1‑149 (MQ=255)                                                                                                                                                  tgtgAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGTGCATCCAGCCCCTCGTCCAGTTGCACCACCCCg  >  4:171888/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   ACGCCAGGGGCTTGGTGTCAGAAAAAAAGTGGCACAGTGCCTCCATTGGTGTGGCCGGCACTGGCCTCTTCGCGGGCTTGCCCGCTCCCAC‑AGGTTTACCTCCAGACTTGAGGTATGTGAAATGCCTGGGGAAGCGGGCGAGCCTGTGAAGAAGCCGGCACCGTGAGTGCGAATTTCAGGGCTCTACACGAACGACGCAATTGCGCCCTGCATGCTTGGCCCGGTACAGCGCCTCGTCCGCTGCACTGGCCATGGTCAGTGCATCCAGCCCCTCGTCCAGTTGCACCACCCCG  >  NC_002947/654812‑655104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.