New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 792963 =62 (1.000)4 (0.070) 4/252 NT 6.6% coding (86/1854 nt) PP_0678 hypothetical protein
?NC_002947 792988 = 54 (0.920)coding (61/1854 nt) PP_0678 hypothetical protein

CGACCGTAGCCTTGAGTTCCTGGTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGG  >  NC_002947/792817‑793107
                                                                                                                                                       |                                                                                                                                                
cgACCGTAGCCTTGAGTTCCTGGTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGc                                                                                                                                                >  5:17800/1‑149 (MQ=255)
   ccGTAGCCTTGAGTTCCTGGTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTgg                                                                                                                                             <  2:138814/149‑1 (MQ=255)
    gctaccgaggcctaagcacagctgctcccgccccacccggggcgggtttcgcctttttcggcatcgtcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTg                                                                                                                                                 >  8:188219‑M1/148‑149 (MQ=255)
    gctaccgaggcctaagcacagctgctcccgccccacccggggcgggtttcgcctttttcggcatcgtcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTg                                                                                                                                                 <  7:188219‑M1/2‑1 (MQ=255)
        ccgctgcctaagcacagctgctcccgccccacccggggcgggtttcgcctttttcggcatcgtcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTGCt                                                                                                                                               >  3:350‑M1/144‑147 (MQ=255)
        ccgaggcctaagcacagctgctcccgccccacccggggcgggtttcgcctttttcggcatcgtcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTGCt                                                                                                                                               >  2:232253‑M1/144‑147 (MQ=255)
        ccgaggcctaagcacagctgctcccgccccacccggggcgggtttcgcctttttcggcatcgtcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTGCt                                                                                                                                               >  2:339837‑M1/144‑147 (MQ=255)
         cgaggcctaagcacagctgctcccgccccacccggggcgggtttcgcctttttcggcatcgtcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTGCTgg                                                                                                                                             <  4:238546‑M1/6‑1 (MQ=255)
         ccTTGAGTTCCTGGTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTg                                                                                                                                                 >  8:198117/1‑139 (MQ=255)
         ccTTGAGTTCCTGGTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTg                                                                                                                                                 <  7:198117/139‑1 (MQ=255)
         ccTTGAGTTCCTGGTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACgg                                                                                                                                       >  5:294912/1‑149 (MQ=255)
          cTTGAGGTGCTGGTGCGGCTGGTGGGCGCCATCATAGGCGACGAAGAACCCCTCATCAATTCCACATAGCTGCCGTTTTGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGgaga                                                                                                                                          <  1:122268/149‑1 (MQ=255)
           ttGAGTTCCTGGTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGcc                                                                                                                                     >  3:140766/1‑149 (MQ=255)
               gTTCCTGGTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGTCCAATTGCTGGAGACGGCCGGGa                                                                                                                                 >  8:341738/1‑149 (MQ=255)
                      gTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGc                                                                                                                           <  6:294912/148‑1 (MQ=255)
                      gTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGc                                                                                                                           <  7:22008/148‑1 (MQ=255)
                         cGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATgg                                                                                                                       >  6:246468/1‑149 (MQ=255)
                           gATGGTGCGCGCCATCTTCGGCGAGGAAGACCGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGGTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCGGGAGCCAGCATgggg                                                                                                                     >  6:110449/1‑149 (MQ=255)
                           gATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATgggg                                                                                                                     >  6:73544/1‑149 (MQ=255)
                               gTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGggcg                                                                                                                  <  1:174909/148‑1 (MQ=255)
                               ccgccccacccggggcgggtttcgcctttttcggcatcgtcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTGCTGGAGACGGCCTGGATCCAGCATg                                                                                                                        >  4:77172‑M1/121‑147 (MQ=255)
                                tGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGggcgg                                                                                                                 >  2:88878/1‑148 (MQ=255)
                                  cgcgcCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCAt                                                                                                              <  4:125954/149‑1 (MQ=255)
                                   gcgcCATCTTCGGCGAGGAAGAACGCCTCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATg                                                                                                             <  4:310144/149‑1 (MQ=255)
                                    cgcCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATg                                                                                                             >  2:120924/1‑148 (MQ=255)
                                       cATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACa                                                                                                         <  6:29331/149‑1 (MQ=255)
                                       cATCTTCGGCGAGGAAGAACGAATCATCA‑‑TCCACATAGCTGCTCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGTTTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGTCATGAACa                                                                                                         <  4:61098/149‑1 (MQ=255)
                                        aTCTTAGGCGAGGAAGAACGCATCATCA‑‑TCCACATATCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAg                                                                                                        <  2:118782/149‑1 (MQ=255)
                                                cGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAg                                                                                                <  6:278570/149‑1 (MQ=255)
                                                 gAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTg                                                                                                                                              <  4:108311/102‑1 (MQ=255)
                                                 gAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTg                                                                                                                                              >  3:108311/1‑102 (MQ=255)
                                                 gAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAgg                                                                                               >  5:210049/1‑149 (MQ=255)
                                                    gaagaaCGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCt                                                                                                                                               >  8:594/1‑98 (MQ=255)
                                                    gaagaaCGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCt                                                                                                                                               <  7:594/98‑1 (MQ=255)
                                                            catcatca‑‑tCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGcc                                                                                    <  8:52892/149‑1 (MQ=255)
                                                               catca‑‑tcCACATAGCTGCGCCAGCCGCCGAGCTTGGCAGTTTTCGTAATGTCAAATGGCGAGCCAGTAGGGGGTATTGGCAAATTGATGGAGACGGCCTGGATCAAGAATGGGGGCGGCATGAAAAGGGCCGCAGGCACACAGCGCCAg                                                                                  >  1:264224/1‑149 (MQ=255)
                                                                atca‑‑tcCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGATCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAggg                                                                                <  2:264224/149‑1 (MQ=255)
                                                                 tca‑‑tcCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAggg                                                                                >  4:287234/1‑148 (MQ=255)
                                                                      tcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTGCTGGAGACGGCCTGGATCCAGCATggg                                                                                                                      <  4:142898‑M1/29‑1 (MQ=255)
                                                                      tcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTGCTGGAGACGGCCTGGATCCAGCATggg                                                                                                                      >  3:142898‑M1/82‑110 (MQ=255)
                                                                        cacaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGggc                                                                                                                   <  8:6305/108‑1 (MQ=255)
                                                                        cacaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGggc                                                                                                                   >  7:6305/1‑108 (MQ=255)
                                                                         acaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGgc                                                                                                    >  5:260070/1‑122 (MQ=255)
                                                                         acaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGgc                                                                                                    <  6:260070/122‑1 (MQ=255)
                                                                         acaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAg                                                                         >  5:290134/1‑149 (MQ=255)
                                                                         acaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAg                                                                         >  3:238546/1‑149 (MQ=255)
                                                                          caTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAgg                                                                        <  8:322456/149‑1 (MQ=255)
                                                                            tAGCTGCGCCAGCCGCCGAGGGTGGCGGTGTCCTCATGCCCCAGGGCGCGCCAGTAGGGGGGATTGGCCAAGTGCTGGAGCCGGCCGGGATCCCGCATGGGGGCGGCAGGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCg                                                                      <  5:110449/149‑1 (MQ=255)
                                                                             aGCTGCGCCAGCCGCCGAGCTTAGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGt                                                                     >  2:176139/1‑149 (MQ=255)
                                                                                 gcgcCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTAATGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGttt                                                                   >  1:304784/1‑147 (MQ=255)
                                                                                   cgcCAGCCGCCGCGCTTGGCGGTTTCGTAAGGTCCAATGGCGAGCCAGGAGGGGGTATTGTCCAATTGCGGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGa                                                                 <  7:341738/148‑1 (MQ=255)
                                                                                   cgcCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAGAAGGGGCGCAGGCACACAGCGCCAGGGCAGCGCGGCGTTTTAg                                                                >  5:312084/1‑149 (MQ=255)
                                                                                           cgccgAGCTTGGCGGTTTCGTTATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCg                                                         <  7:286417/149‑1 (MQ=255)
                                                                                             ccgAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCggg                                                       <  5:73544/149‑1 (MQ=255)
                                                                                                 gCTGGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTCTTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAac                                                   <  4:313066/149‑1 (MQ=255)
                                                                                                   ttGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGaa                                                                                                           <  6:374617/91‑1 (MQ=255)
                                                                                                         ggTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTActtct                                            <  1:88878/149‑1 (MQ=255)
                                                                                                            ttCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGa                                         >  5:329321/1‑149 (MQ=255)
                                                                                                               gTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGGTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCaa                                                    >  1:75064/1‑135 (MQ=255)
                                                                                                               gTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCaa                                                    <  2:75064/135‑1 (MQ=255)
                                                                                                                  aTGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCTCCAGGGCAGCGAGGCGTTTGAGCATATCGGGAAACTACTTCTTGACGATGc                                   <  6:340227/149‑1 (MQ=255)
                                                                                                                   tGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAac                                                   <  7:53537/132‑1 (MQ=255)
                                                                                                                   tGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAac                                                   >  8:53537/1‑132 (MQ=255)
                                                                                                                      ccAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGa                                >  7:20777/1‑148 (MQ=255)
                                                                                                                       cAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGaa                               >  7:275977/1‑148 (MQ=255)
                                                                                                                        aaTGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGaaa                              >  8:156957/1‑148 (MQ=255)
                                                                                                                        aaTGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGaaa                              >  3:283437/1‑148 (MQ=255)
                                                                                                                            gCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAgg                          <  6:17800/148‑1 (MQ=255)
                                                                                                                              gAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCg                        >  5:343444/1‑148 (MQ=255)
                                                                                                                                     tAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACATAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGc                >  3:239983/1‑149 (MQ=255)
                                                                                                                                      tgttcatgccgcccccaTGCTGGATCCAGGCCGTCTCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGcc               <  3:351682‑M1/132‑1 (MQ=255)
                                                                                                                                         gggTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCg            <  4:140766/149‑1 (MQ=255)
                                                                                                                                          ggTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCgg           >  3:210073/1‑149 (MQ=255)
                                                                                                                                              ttGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTg        <  4:338324/148‑1 (MQ=255)
                                                                                                                                                ggCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTggg      <  6:329321/148‑1 (MQ=255)
                                                                                                                                                 gCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTActtctt                                           <  3:116085/110‑1 (MQ=255)
                                                                                                                                                 gCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTActtctt                                           >  4:116085/1‑110 (MQ=255)
                                                                                                                                                 gCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTgggg     <  3:287234/148‑1 (MQ=255)
                                                                                                                                                 gCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGc    >  5:388149/1‑149 (MQ=255)
                                                                                                                                                  ccAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCg   >  7:166790/1‑149 (MQ=255)
                                                                                                                                                   caagTGCTGGAGCCGGCCGGGATCCAGCATGGGGGCGGCATGAACCGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCgg  >  5:64876‑M1/5‑149 (MQ=255)
                                                                                                                                                       |                                                                                                                                                
CGACCGTAGCCTTGAGTTCCTGGTCCGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCA‑‑TCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATATCGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGG  >  NC_002947/792817‑793107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.