New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 792963 =62 (1.000)4 (0.070) 4/252 NT 6.6% coding (86/1854 nt) PP_0678 hypothetical protein
?NC_002947 792988 = 54 (0.920)coding (61/1854 nt) PP_0678 hypothetical protein

CGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCTGTGCTTAGGCCTCGGTAGC  >  NC_002947/792842‑793134
                                                                                                                                                   |                                                                                                                                                    
cGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATgg                                                                                                                                                    >  6:246468/1‑149 (MQ=255)
  gATGGTGCGCGCCATCTTCGGCGAGGAAGACCGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGGTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCGGGAGCCAGCATgggg                                                                                                                                                  >  6:110449/1‑149 (MQ=255)
  gATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATgggg                                                                                                                                                  >  6:73544/1‑149 (MQ=255)
  ccgccccacccggggcgggtttcgcctttttcggcatcgtcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTGCTGGAGACGGCCTGGATCCAGCATg                                                                                                                                                     >  4:77172‑M1/121‑147 (MQ=255)
      gTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGggcg                                                                                                                                               <  1:174909/148‑1 (MQ=255)
       tGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGggcgg                                                                                                                                              >  2:88878/1‑148 (MQ=255)
         cgcgcCATCTTCGGCGAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCAt                                                                                                                                           <  4:125954/149‑1 (MQ=255)
          gcgcCATCTTCGGCGAGGAAGAACGCCTCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATg                                                                                                                                          <  4:310144/149‑1 (MQ=255)
           cgcCATCTTCGGCGAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATg                                                                                                                                          >  2:120924/1‑148 (MQ=255)
              cATCTTCGGCGAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACa                                                                                                                                      <  6:29331/149‑1 (MQ=255)
              cATCTTCGGCGAGGAAGAACGAATCATCATCCACATAGCTGCTCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGTTTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGTCATGAACa                                                                                                                                      <  4:61098/149‑1 (MQ=255)
               ggcgggtttcgcctttttcggcatcgtcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccatgctggagacggcctggatccagcaTGGGGGCGGCATGAACa                                                                                                                                      <  3:351682‑M2/17‑1 (MQ=255)
               aTCTTAGGCGAGGAAGAACGCATCATCATCCACATATCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAg                                                                                                                                     <  2:118782/149‑1 (MQ=255)
                       cGAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAg                                                                                                                             <  6:278570/149‑1 (MQ=255)
                        gAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAgg                                                                                                                            >  5:210049/1‑149 (MQ=255)
                                   catcatcatCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGcc                                                                                                                 <  8:52892/149‑1 (MQ=255)
                                      catcatcCACATAGCTGCGCCAGCCGCCGAGCTTGGCAGTTTTCGTAATGTCAAATGGCGAGCCAGTAGGGGGTATTGGCAAATTGATGGAGACGGCCTGGATCAAGAATGGGGGCGGCATGAAAAGGGCCGCAGGCACACAGCGCCAg                                                                                                               >  1:264224/1‑149 (MQ=255)
                                       atcatcCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGATCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAggg                                                                                                             <  2:264224/149‑1 (MQ=255)
                                        tcatcCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAggg                                                                                                             >  4:287234/1‑148 (MQ=255)
                                         tcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTGCTGGAGACGGCCTGGATCCAGCATggg                                                                                                                                                   >  3:142898‑M1/82‑110 (MQ=255)
                                         tcaagaagtagttgcccgatatgctcaaacgcctcgctgccctggcgctgtgtgcctgcgcccctgttcatgccgcccccaTGCTGGAGACGGCCTGGATCCAGCATggg                                                                                                                                                   <  4:142898‑M1/29‑1 (MQ=255)
                                             cacaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGggc                                                                                                                                                <  8:6305/108‑1 (MQ=255)
                                             cacaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGggc                                                                                                                                                >  7:6305/1‑108 (MQ=255)
                                              acaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGgc                                                                                                                                 <  6:260070/122‑1 (MQ=255)
                                              acaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGgc                                                                                                                                 >  5:260070/1‑122 (MQ=255)
                                              acaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAg                                                                                                      >  5:290134/1‑149 (MQ=255)
                                              acaTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAg                                                                                                      >  3:238546/1‑149 (MQ=255)
                                               caTAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAgg                                                                                                     <  8:322456/149‑1 (MQ=255)
                                                 tAGCTGCGCCAGCCGCCGAGGGTGGCGGTGTCCTCATGCCCCAGGGCGCGCCAGTAGGGGGGATTGGCCAAGTGCTGGAGCCGGCCGGGATCCCGCATGGGGGCGGCAGGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCg                                                                                                   <  5:110449/149‑1 (MQ=255)
                                                  aGCTGCGCCAGCCGCCGAGCTTAGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGt                                                                                                  >  2:176139/1‑149 (MQ=255)
                                                      gcgcCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTAATGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGttt                                                                                                >  1:304784/1‑147 (MQ=255)
                                                       cgcCAGCCGCCGCGCTTGGCGGTTTCGTAAGGTCCAATGGCGAGCCAGGAGGGGGTATTGTCCAATTGCGGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGa                                                                                              <  7:341738/148‑1 (MQ=255)
                                                       cgcCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAGAAGGGGCGCAGGCACACAGCGCCAGGGCAGCGCGGCGTTTTAg                                                                                             >  5:312084/1‑149 (MQ=255)
                                                              cgccgAGCTTGGCGGTTTCGTTATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑Cg                                                                                    <  7:286417/149‑1 (MQ=255)
                                                                ccgAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑Cggg                                                                                  <  5:73544/149‑1 (MQ=255)
                                                                    gCTGGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTCTTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAac                                                                              <  4:313066/149‑1 (MQ=255)
                                                                      ttGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGaa                                                                                                                                        <  6:374617/91‑1 (MQ=255)
                                                                            ggTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTActtct                                                                       <  1:88878/149‑1 (MQ=255)
                                                                               ttCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGa                                                                    >  5:329321/1‑149 (MQ=255)
                                                                                  gTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGGTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCaa                                                                               >  1:75064/1‑135 (MQ=255)
                                                                                  gTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCaa                                                                               <  2:75064/135‑1 (MQ=255)
                                                                                     aTGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCTCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGAAACTACTTCTTGACGATGc                                                              <  6:340227/149‑1 (MQ=255)
                                                                                      tGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAac                                                                              <  7:53537/132‑1 (MQ=255)
                                                                                      tGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAac                                                                              >  8:53537/1‑132 (MQ=255)
                                                                                         ccAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGa                                                           >  7:20777/1‑148 (MQ=255)
                                                                                          cAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGaa                                                          >  7:275977/1‑148 (MQ=255)
                                                                                           aaTGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGaaa                                                         >  3:283437/1‑148 (MQ=255)
                                                                                           aaTGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGaaa                                                         >  8:156957/1‑148 (MQ=255)
                                                                                               gCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAgg                                                     <  6:17800/148‑1 (MQ=255)
                                                                                                 gAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCg                                                   >  5:343444/1‑148 (MQ=255)
                                                                                                        tAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACATAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGc                                           >  3:239983/1‑149 (MQ=255)
                                                                                                         tgttcatgccgcccccaTGCTGGATCCAGGCCGTCTCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGcc                                          <  3:351682‑M1/132‑1 (MQ=255)
                                                                                                            gggTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCg                                       <  4:140766/149‑1 (MQ=255)
                                                                                                             ggTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCgg                                      >  3:210073/1‑149 (MQ=255)
                                                                                                                 ttGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTg                                   <  4:338324/148‑1 (MQ=255)
                                                                                                                   ggCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTggg                                 <  6:329321/148‑1 (MQ=255)
                                                                                                                    gCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTActtctt                                                                      <  3:116085/110‑1 (MQ=255)
                                                                                                                    gCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTActtctt                                                                      >  4:116085/1‑110 (MQ=255)
                                                                                                                    gCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTgggg                                <  3:287234/148‑1 (MQ=255)
                                                                                                                    gCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGc                               >  5:388149/1‑149 (MQ=255)
                                                                                                                     ccAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCg                              >  7:166790/1‑149 (MQ=255)
                                                                                                                      cccatgctggatccaggccgtctccagcaTGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGa                                                                    <  4:142898‑M2/81‑1 (MQ=255)
                                                                                                                      cccatgctggatccaggccgtctccagcaTGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGa                                                                    >  3:142898‑M2/30‑110 (MQ=255)
                                                                                                                      caagTGCTGGAGCCGGCCGGGATCCAGCATGGGGGCGGCATGAACCGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCgg                             >  5:64876‑M1/5‑149 (MQ=255)
                                                                                                                        catgctggatccaggccgtctccagcaTGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCgg                             >  4:77172‑M2/28‑147 (MQ=255)
                                                                                                                               GAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCtg                    <  2:311092‑M1/149‑1 (MQ=255)
                                                                                                                                 gaCGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCtgtg                  >  4:161239/1‑149 (MQ=255)
                                                                                                                                         ggATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAA‑‑CGGGCAACTACTTCTTGACGATGCCGAATAAGGCGAAACCCGCCCCGCGTCGGGCGGGAGCAGCTGTGCTAAGGcg          >  6:301204/1‑148 (MQ=255)
                                                                                                                                          gATCCAGCATGGGGGCGGCATGTACAGGGGCGCATGCACACAGCGCCAGGGGAGCGTGGCGTTTGAGCATATTCCTGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCTGTGCTTAg             <  1:120924/147‑1 (MQ=255)
                                                                                                                                             ccagcaTGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCTGTGCTTAGGCCTCg       <  4:238546‑M2/142‑1 (MQ=255)
                                                                                                                                               agcaTGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCTGTGCttaggcagcgg      >  3:350‑M2/5‑142 (MQ=255)
                                                                                                                                               agcaTGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCTGTGCTTAGGCCTCgg      >  2:339837‑M2/5‑147 (MQ=255)
                                                                                                                                               agcaTGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCTGTGCTTAGGCCTCgg      >  2:232253‑M2/5‑147 (MQ=255)
                                                                                                                                                 caTGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCTGTGCTTAGGCCTCGGTAGc  >  8:188219‑M2/3‑149 (MQ=255)
                                                                                                                                                 caTGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCTGTGCTTAGGCCTCGGTAGc  <  7:188219‑M2/147‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
CGGATGGTGCGCGCCATCTTCGGCGAGGAAGAACGCATCATCATCCACATAGCTGCGCCAGCCGCCGAGCTTGGCGGTTTCGTAATGTCCAATGGCGAGCCAGTAGGGGGTATTGGCCAATTGCTGGAGACGGCCTGGATCCAGCATGGGGGCGGCATGAACAGGGGCGCAGGCACACAGCGCCAGGGCAGCGAGGCGTTTGAGCATAT‑‑CGGGCAACTACTTCTTGACGATGCCGAAAAAGGCGAAACCCGCCCCGGGTGGGGCGGGAGCAGCTGTGCTTAGGCCTCGGTAGC  >  NC_002947/792842‑793134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.