New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 888827	55 (0.890)	4 (0.070)	4/254	NT	6.9%	coding (257/693 nt)	PP_0769	sensor histidine kinase
	?	NC_002947	= 888842	56 (0.950)					coding (272/693 nt)	PP_0769	sensor histidine kinase

GAGCGGTTGCCCGAGGAACTGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGATCGCCAACGTCATCAC  >  NC_002947/888679‑888974                                                                                                                                                     |                                                                                                                                                     gAGCGGTTGCCCGAGGGACTGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGACCGGACTACAATGAGCT                                                                                                                                                      >  6:307006‑M1/1‑149 (MQ=255) gAGCGGTTGCCCGAGGAACTGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCAAGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCT                                                                                                                                                      <  6:361291‑M1/149‑1 (MQ=255)           ccGAGGAACTGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGAttt                                                                                                                                            >  1:372476/1‑148 (MQ=255)            cGAGGAACTGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCa                                                                                                                                          >  5:60654/1‑149 (MQ=255)             gAGGAACTGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGAATGCCCGGACTACCATGAGCTG‑GATGATTTCAt                                                                                                                                         >  8:23100/1‑149 (MQ=255)              aGGAACTGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGGTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATc                                                                                                                                        <  8:139466/149‑1 (MQ=255)               ggAACTGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCg                                                                                                                                       <  6:197322/149‑1 (MQ=255)                   cTGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAagc                                                                                                                                   <  7:328498‑M2/149‑4 (MQ=255)                    tGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTTGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAagct                                                                                                                                  <  5:87000‑M2/149‑5 (MQ=255)                    tGCGCGGCGGTGCCGAACAGGGGAGAATGGAGCATGAGTTTCGTCACCTCACCGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAagct                                                                                                                                  <  7:171724‑M2/149‑5 (MQ=255)                      cgcgGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAagctca                                                                                                                                >  6:311554‑M2/1‑143 (MQ=255)                        cggcggTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGc                                                                                                                              <  1:15899/149‑1 (MQ=255)                              tgacgaaCAGGGGATCATGGATCATGAGTTTCGTCACCTCAACGGCATGCTTGTGCAGTTGCTGGTCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTtcgatgaaatcatccagctcatggtag                                                                                                                           <  7:305892‑M1/144‑28 (MQ=255)                                ccGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTggcggtc                                                                                                                      <  6:60654/149‑3 (MQ=255)                                  gAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTTCGATGAAATCATCCAgctcatggtagtccggg                                                                                                                     >  2:183690‑M2/1‑132 (MQ=255)                                         ggATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGaa                                                                                                             <  3:173844/149‑1 (MQ=255)                                         ggATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGaa                                                                                                             <  5:149942/149‑1 (MQ=255)                                              aTGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGaa                                                                                                             <  7:134122/144‑1 (MQ=255)                                              aTGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGaa                                                                                                             >  8:134122/1‑144 (MQ=255)                                               tGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTc                                                                                                       <  2:372476/149‑1 (MQ=255)                                                 gAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCaa                                                                                                     <  5:185616/149‑1 (MQ=255)                                                  aGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAg                                                                                                    <  2:19/149‑1 (MQ=255)                                                  aGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAg                                                                                                    >  5:347553/1‑149 (MQ=255)                                                   gCATGAGTTTCGTCACCTCATCGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGCGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGc                                                                                                   <  8:237828/149‑1 (MQ=255)                                                      tGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATTGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGcac                                                                                                 >  4:95923/1‑148 (MQ=255)                                                      tGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGcac                                                                                                 >  2:311514/1‑148 (MQ=255)                                                          tttCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACg                                                                                             >  3:235772/1‑148 (MQ=255)                                                              gTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTtcgatgaaatcatccagctcat                                                                                                                                >  7:69165‑M1/1‑88 (MQ=255)                                                              gTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTtcgatgaaatcatccagctcat                                                                                                                                <  8:69165‑M1/110‑23 (MQ=255)                                                                   cTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATTGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGc                                                                                   <  3:95923/149‑1 (MQ=255)                                                                   cTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGc                                                                                   <  3:48660/149‑1 (MQ=255)                                                                   cTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGc                                                                                   >  1:229078/1‑149 (MQ=255)                                                                   cTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGAACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGc                                                                                   >  1:243515/1‑149 (MQ=255)                                                                    tCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGc                                                                                   >  5:130680/1‑148 (MQ=255)                                                                    tCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCACAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGc                                                                                   >  5:372264/1‑148 (MQ=255)                                                                     cAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCa                                                                                 >  6:107449/1‑149 (MQ=255)                                                                      aaCGGCATGCTGGTGCAGTTCCTGGGCTTGTACAAACTCGCTGTGAACCAGTTGCCGCTATGCCCGGACTACCATGAGCTC‑GATCATTTCATCGAAGCTCACCTGGCGGCGCACCAGGAAGTACTCAAGCACAACGACATTCTCGCCAc                                                                                >  3:203150/1‑149 (MQ=255)                                                                       aCGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACt                                                                               <  8:171724/149‑1 (MQ=255)                                                                           cATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATtctc                                                                                     >  2:63601/1‑139 (MQ=255)                                                                           cATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATtctc                                                                                     <  1:63601/139‑1 (MQ=255)                                                                                      aGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACAcc                                                                <  7:363305/149‑1 (MQ=255)                                                                                              ggCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAAc                                                          <  8:328498/147‑1 (MQ=255)                                                                                               gCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGCCATTCTCGCCACTTGGCGCATCGACACCGACAACCCg                                                       >  8:107869/1‑149 (MQ=255)                                                                                               gCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCg                                                       >  2:343239/1‑149 (MQ=255)                                                                                                   gTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTg                                                    <  5:117735/148‑1 (MQ=255)                                                                                                   gTACAAACTGGGTGTGAACCAGTTGCCGGAATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTg                                                    <  7:23100/148‑1 (MQ=255)                                                                                                    tACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTggg                                                  >  6:186234/1‑149 (MQ=255)                                                                                                      cAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGAGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGt                                                 <  3:156899/148‑1 (MQ=255)                                                                                                        aaCTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTttc                                              >  2:100638/1‑149 (MQ=255)                                                                                                                   aaCCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACcgcg                                    >  7:160000/1‑148 (MQ=255)                                                                                                                    aCCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGATGGGTTTAGTCGACcgcgca                                  >  6:270244/1‑147 (MQ=255)                                                                                                                     ccAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACaa                                                           >  2:56360/1‑123 (MQ=255)                                                                                                                        gTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACtgg                              >  6:179835/1‑149 (MQ=255)                                                                                                                           gCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACtggtg                            <  8:160000/148‑1 (MQ=255)                                                                                                                           gCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACtggtg                            <  5:107449/148‑1 (MQ=255)                                                                                                                            ccGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGc                          >  3:370627/1‑149 (MQ=255)                                                                                                                               gTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTc                       >  2:19330/1‑149 (MQ=255)                                                                                                                                  tGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCgg                     <  1:343239/148‑1 (MQ=255)                                                                                                                                    cccGGACTACCATGAGCggatgatttcatcgaagctcatggtagtccgggcataccggcaactggttcacacccagtttgtacaagcccagcaactgcaccagcatgccgttgaggtgacgaaactcatgctccatgatcccctgttc                    >  2:183690‑M1/1‑18 (MQ=255)                                                                                                                                    cccGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGTCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGa                  <  1:311514/149‑1 (MQ=255)                                                                                                                                    cccGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGACACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTg                   >  7:248824/1‑148 (MQ=255)                                                                                                                                        gACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGATCGc              >  6:210491/1‑149 (MQ=255)                                                                                                                                          cTACCATGAGCTG‑GATGATTTCATCGAagctcatggtagtccgggcataccggcaactggttcacacccagtttgtacaagaccagcaactgcacaagcatgccgttgaggtgacgaaactcatgatccatgatcccctgttcgtca              <  7:305892‑M2/147‑121 (MQ=255)                                                                                                                                               aTGAGCTG‑GATGATTTCATCGAagctcatggtagtccgggcataccggcaactggttcacacccagtttgtacaagcccagcaactgcaccagcatgccgttgaggtgac                                              <  8:69165‑M2/110‑89 (MQ=255)                                                                                                                                               aTGAGCTG‑GATGATTTCATCGAagctcatggtagtccgggcataccggcaactggttcacacccagtttgtacaagcccagcaactgcaccagcatgccgttgaggtgac                                              >  7:69165‑M2/1‑22 (MQ=255)                                                                                                                                               aTGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAAAGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGATCGCCAACGt        >  1:133414/1‑148 (MQ=255)                                                                                                                                                tGAGCTtcgatgaaatcatccagctcatggtagtccgggcataccggcaactggttcacacccagtttgtacaagcccagcaactgcaccagcatgccgttgaggtgacgaaactcatgctccatgatcccctgttcggcaccgccgcg       >  6:311554‑M1/1‑6 (MQ=255)                                                                                                                                                tGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGATCGCCAACGtca      >  8:207962/1‑149 (MQ=255)                                                                                                                                                tGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGATCGCCAACGtca      >  5:297238/1‑149 (MQ=255)                                                                                                                                                tGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGATCGCCAACGtca      >  8:277874/1‑149 (MQ=255)                                                                                                                                                  aGCTtcgatgaaatcatccagctcatggtagtccgggcataccggcaactggttcacacccagtttgtacaagcccagcaactgcaccagcatgccgttgaggtgacaaaactcatgctccatgatcccctgttcggcaccgccgcgca     <  5:87000‑M1/149‑146 (MQ=255)                                                                                                                                                  aGCTtcgatgaaatcatccagctcatggtagtccgggcataccggcaactggttcacacccagtttgtacaagcccagcaactgcaccagcatgccggtgaggtgacgaaactcatgctccattctcccctgttcggcaccgccgcgca     <  7:171724‑M1/149‑146 (MQ=255)                                                                                                                                                  aGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGATCGCCAACGtcat     <  5:179835/148‑1 (MQ=255)                                                                                                                                                   gCTtcgatgaaatcatccagctcatggtagtccgggcataccggcaactggttcacacccagtttgtacaagcccagcaactgcaccagcatgccgttgaggtgacgaaactcatgctccatgatcccctgttcggcaccgccgcgcag    <  7:328498‑M1/149‑147 (MQ=255)                                                                                                                                                   gCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGa                                                                    >  6:343554/1‑84 (MQ=255)                                                                                                                                                   gCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGATCGCCAACGtcatca   >  3:28440/1‑149 (MQ=255)                                                                                                                                                    cTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGATCGCCAACGTCATCAc  <  4:178869/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GAGCGGTTGCCCGAGGAACTGCGCGGCGGTGCCGAACAGGGGATCATGGAGCATGAGTTTCGTCACCTCAACGGCATGCTGGTGCAGTTGCTGGGCTTGTACAAACTGGGTGTGAACCAGTTGCCGGTATGCCCGGACTACCATGAGCTG‑GATGATTTCATCGAAGCTCAGCTGGCGGCGCACGAGGAAGTACTCAAGCACAACGACATTCTCGCCACTTGGCGCATCGACACCGACAACCCGCTGGGTTTCTTCGACCGCGAACTGGTGGCCTCGGTGATCGCCAACGTCATCAC  >  NC_002947/888679‑888974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.