New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3648640 =	66 (1.060)	6 (0.100)	6/258	NT	8.6%	intergenic (+117/+1574)	PP_3214/PP_3216	hypothetical protein/cysteine dioxygenase
	?	NC_002947	3648684 =	64 (1.060)					intergenic (+161/+1530)	PP_3214/PP_3216	hypothetical protein/cysteine dioxygenase

GTTGAGTGCATTGATCAAGGTGCATTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGT  >  NC_002947/3648493‑3648786                                                                                                                                                     |                                                                                                                                                   gtccctatgaaggcacagacaacccacacgaggcgatgcagggctacctggactgggaatttggcctgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgc                                                                                                                                                    >  5:54837‑M1/149‑149 (MQ=255) gTTGAGTGCATTGATCAAGGTGCATTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTc                                                                                                                                                    >  6:289917/1‑148 (MQ=255) gTTGAGTGCATTGATCAAGGTGCATTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTc                                                                                                                                                    <  5:289917/148‑1 (MQ=255)  ttGAGTGCATTGATCAAGGTGCATTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTg                                                                                                                                                  <  4:291044/149‑1 (MQ=255)  tccctatgaaggcacagacaacccacacgaggcgatgcagggctacctggactgggaatttggcctgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgCt                                                                                                                                                   >  1:158795‑M1/148‑149 (MQ=255)    gAGTGCATTGATCAAGGTGCATTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCATGTAACGCGTCTGGt                                                                                                                                                >  4:358282/1‑149 (MQ=255)       tGCATTGATCAAGGTGCATTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATGACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCg                                                                                                                                             <  3:43245/149‑1 (MQ=255)          aTTGATCAAGGTGCATTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGa                                                                                                                                            >  3:164555/1‑147 (MQ=255)             gcacagacaacccacacgaggcgatgcagggctacctggactgggaatttggcctgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgCTGGTTCGAAAGc                                                                                                                                        <  5:105020‑M1/13‑1 (MQ=255)              aTCAAGGTGCATTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTGCAGGCTCCGTTGATCATCACTCATCGAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTAGTAGGCTTGTAACGCGTCTGGTTCGAAAGCtt                                                                                                                                      >  6:128182/1‑149 (MQ=255)                  aGGTGCATTTCTAATGTGATGTTTCAGACGTACCATCTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGtt                                                                                                                                               >  1:58572/1‑137 (MQ=255)                  aGGTGCATTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGtt                                                                                                                                               <  2:58572/136‑1 (MQ=255)                        aTTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTcc                                                                                                                            <  4:308856/149‑1 (MQ=255)                         tttCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTc                                                                                                                             >  3:266744/1‑147 (MQ=255)                          ttCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAg                                                                                                                          >  5:92615/1‑149 (MQ=255)                                   gATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCTTTGATCATCACTCATCAAGCGTTGTGTATCGACGATAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCtt                                                                                                                  <  3:353375/148‑1 (MQ=255)                                   gATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCtt                                                                                                                  <  3:20206/148‑1 (MQ=255)                                     tGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCg                                                                                                               <  5:128182/149‑1 (MQ=255)                                       tttCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGa                                                                                                              <  6:387606/148‑1 (MQ=255)                                        agggctacctggactgggaatttggcctgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGAt                                                                                                             >  6:105020‑M1/110‑149 (MQ=255)                                         gggctacctggcctgggaatttggcctgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgCTg                                                                                                                                                  <  4:352892‑M1/3‑1 (MQ=255)                                         gggctacctggactgggaatttggcctgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgCTg                                                                                                                                                  >  3:352892‑M1/109‑111 (MQ=255)                                           gctacctggactgggaatttggcctgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCa                                                                                                          >  1:184976‑M1/107‑149 (MQ=255)                                               gTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGcgcg                                                                                                     <  7:100065/149‑1 (MQ=255)                                                  cga‑CTGAGTATCTGGTACAGGCTCCGTTGAGCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGcgt                                                                                                    <  3:351429/145‑1 (MQ=255)                                                   gactgggaatttggcctgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgCTGGTTCGAAAGCTTTTGGCCGTCCGGGCCCGCTTTCGATCCAGCGcgtc                                                                                                   >  1:52221‑M1/99‑148 (MQ=255)                                                   cA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGcgtcgt                                                                                                 >  5:210567/1‑149 (MQ=255)                                                      cTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGttt                                                                                               <  1:108042/149‑1 (MQ=255)                                                         aGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTc                                                                                              <  4:164555/147‑1 (MQ=255)                                                          gTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACTAGAGCCGACCCGCAACGTTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTACAGGCCCGCTTTAGATCCAGCGCGTCGTTTCaa                                                                                            >  7:214221/1‑148 (MQ=255)                                                             tCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATac                                                                                        >  3:32245/1‑149 (MQ=255)                                                             tCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGACCGCATTCGATCCAGCGCGTCGTTTCAAATac                                                                                        >  6:75377/1‑149 (MQ=255)                                                                  tACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCg                                                                                   >  6:52937/1‑149 (MQ=255)                                                                   tgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATc                                                                                                            >  8:33472‑M1/83‑123 (MQ=255)                                                                   tgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATc                                                                                                            <  7:33472‑M1/41‑1 (MQ=255)                                                                     aGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTgg                                                                                <  1:168075/149‑1 (MQ=255)                                                                     aGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTg                                                                                 >  4:40694/1‑148 (MQ=255)                                                                       gCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCAAGCGCGTCGTTTCAAATACCACCGTGGa                                                                               >  5:290854/1‑148 (MQ=255)                                                                        cTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCCGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATa                                                                             >  3:347326/1‑149 (MQ=255)                                                                         tCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCGGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATAc                                                                            >  8:173401/1‑149 (MQ=255)                                                                           cGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACgg                                                                          <  5:220420/149‑1 (MQ=255)                                                                               gATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTc                                                                       <  6:2550/148‑1 (MQ=255)                                                                                 tcatcaCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCaaa                                                                    <  5:52937/149‑1 (MQ=255)                                                                                   atcaCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGGGTCGTTTCAAATACCACCGTGGATACGGTTCAAAg                                                                   >  5:363735/1‑148 (MQ=255)                                                                                   atcaCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTAACCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGGGTCGTTTCAAATACCACCGTGGATACGGTTCAAAg                                                                   >  5:369244/1‑148 (MQ=255)                                                                                   atcaCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTAACCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTAGATCCAGCGCGTCGTTTAAAATACCTCCGTGGATACGGTTCAAAGc                                                                  >  4:227937/1‑149 (MQ=255)                                                                                     caCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCttt                                                                                                                                     >  6:103510/1‑80 (MQ=255)                                                                                     caCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCttt                                                                                                                                     <  5:103510/80‑1 (MQ=255)                                                                                     caCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCAc                                                                >  4:275205/1‑149 (MQ=255)                                                                                     caCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCAc                                                                >  5:198916/1‑149 (MQ=255)                                                                                        tcatcaAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCt                                                             >  1:360401/1‑149 (MQ=255)                                                                                                cGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCAt                                                     <  7:103878/149‑1 (MQ=255)                                                                                                cGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCAt                                                     <  3:40694/149‑1 (MQ=255)                                                                                                    gtgtATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAg                                                  <  7:295957/148‑1 (MQ=255)                                                                                                    gtgtATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAg                                                  <  4:32245/148‑1 (MQ=255)                                                                                                     tgtATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGt                                                 <  6:115281/148‑1 (MQ=255)                                                                                                         tCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCAcc                                                               >  3:168408/1‑130 (MQ=255)                                                                                                         tCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCAcc                                                               <  4:168408/130‑1 (MQ=255)                                                                                                           gacgaGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTGCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATcg                                          >  8:64243/1‑149 (MQ=255)                                                                                                              gagaGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCgcgc                                       >  7:215082/1‑149 (MQ=255)                                                                                                                gagCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTGGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTc                                     <  5:75377/149‑1 (MQ=255)                                                                                                                 agCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCa                                    <  3:275205/149‑1 (MQ=255)                                                                                                                   ccGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAg                                                                   >  4:110890/1‑116 (MQ=255)                                                                                                                   ccGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAg                                                                   <  3:110890/116‑1 (MQ=255)                                                                                                                       cccGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCTAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTgc                              <  8:223126/149‑1 (MQ=255)                                                                                                                       cccGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGc                                               <  1:227935/132‑1 (MQ=255)                                                                                                                       cccGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGc                                               >  2:227935/1‑132 (MQ=255)                                                                                                                       cccGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTgc                              <  4:266744/149‑1 (MQ=255)                                                                                                                       cccGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTgc                              <  4:39391/149‑1 (MQ=255)                                                                                                                          gCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTgcgc                            >  8:48362/1‑148 (MQ=255)                                                                                                                            aaCGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAAt                         <  3:5232/149‑1 (MQ=255)                                                                                                                               ggTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAg                      <  2:360401/149‑1 (MQ=255)                                                                                                                                gTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAgg                     <  6:290854/149‑1 (MQ=255)                                                                                                                                  tattaCCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGc                    >  2:184690/1‑148 (MQ=255)                                                                                                                                       cccTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAAtt              >  2:82275/1‑149 (MQ=255)                                                                                                                                        ccTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTc             >  6:210865/1‑149 (MQ=255)                                                                                                                                         cTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTcc            <  6:92615/149‑1 (MQ=255)                                                                                                                                          ttGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCCCCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTcc            >  2:199381/1‑148 (MQ=255)                                                                                                                                               aCGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTcc      >  2:122319/1‑149 (MQ=255)                                                                                                                                               aCGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTc       >  5:16053/1‑148 (MQ=255)                                                                                                                                                   gTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGt  <  1:184690/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GTTGAGTGCATTGATCAAGGTGCATTTCTAATGTGATGTTTCAGACGTACCA‑CTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGT  >  NC_002947/3648493‑3648786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.