New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3648640 =66 (1.060)6 (0.100) 6/258 NT 8.6% intergenic (+117/+1574) PP_3214/PP_3216 hypothetical protein/cysteine dioxygenase
?NC_002947 3648684 = 64 (1.060)intergenic (+161/+1530) PP_3214/PP_3216 hypothetical protein/cysteine dioxygenase

GTACCACTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCTGTGCCTTCATAGGGAC  >  NC_002947/3648539‑3648831
                                                                                                                                                 |                                                                                                                                                    
gTACCACTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGcgcg                                                                                                                                                   <  7:100065/149‑1 (MQ=255)
   gactgggaatttggcctgattgcgcagcttgagcgcgatggcactcatggtttcagggtgctttgaaccgtatccacggtggtatttgaaacgacgcgCTGGTTCGAAAGCTTTTGGCCGTCCGGGCCCGCTTTCGATCCAGCGcgtc                                                                                                                                                 >  1:52221‑M1/99‑148 (MQ=255)
   cgaCTGAGTATCTGGTACAGGCTCCGTTGAGCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGcgt                                                                                                                                                  <  3:351429/145‑1 (MQ=255)
    cACTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGcgtcgt                                                                                                                                               >  5:210567/1‑149 (MQ=255)
      cTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGttt                                                                                                                                             <  1:108042/149‑1 (MQ=255)
         aGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTc                                                                                                                                            <  4:164555/147‑1 (MQ=255)
          gTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACTAGAGCCGACCCGCAACGTTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTACAGGCCCGCTTTAGATCCAGCGCGTCGTTTCaa                                                                                                                                          >  7:214221/1‑148 (MQ=255)
             tCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATac                                                                                                                                      >  3:32245/1‑149 (MQ=255)
             tCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGACCGCATTCGATCCAGCGCGTCGTTTCAAATac                                                                                                                                      >  6:75377/1‑149 (MQ=255)
                  tACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCg                                                                                                                                 >  6:52937/1‑149 (MQ=255)
                     aGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTgg                                                                                                                              <  1:168075/149‑1 (MQ=255)
                     aGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTg                                                                                                                               >  4:40694/1‑148 (MQ=255)
                       gCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCAAGCGCGTCGTTTCAAATACCACCGTGGa                                                                                                                             >  5:290854/1‑148 (MQ=255)
                        cTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCCGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATa                                                                                                                           >  3:347326/1‑149 (MQ=255)
                         tCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCGGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATAc                                                                                                                          >  8:173401/1‑149 (MQ=255)
                           cGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACgg                                                                                                                        <  5:220420/149‑1 (MQ=255)
                               gATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTc                                                                                                                     <  6:2550/148‑1 (MQ=255)
                                 tcatcaCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCaaa                                                                                                                  <  5:52937/149‑1 (MQ=255)
                                   atcaCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGGGTCGTTTCAAATACCACCGTGGATACGGTTCAAAg                                                                                                                 >  5:363735/1‑148 (MQ=255)
                                   atcaCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTAACCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGGGTCGTTTCAAATACCACCGTGGATACGGTTCAAAg                                                                                                                 >  5:369244/1‑148 (MQ=255)
                                   atcaCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTAACCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTAGATCCAGCGCGTCGTTTAAAATACCTCCGTGGATACGGTTCAAAGc                                                                                                                >  4:227937/1‑149 (MQ=255)
                                     caCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCAc                                                                                                              >  5:198916/1‑149 (MQ=255)
                                     caCTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCAc                                                                                                              >  4:275205/1‑149 (MQ=255)
                                        tcatcaAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCt                                                                                                          >  1:360401/1‑149 (MQ=255)
                                                cGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCAt                                                                                                  <  7:103878/149‑1 (MQ=255)
                                                cGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCAt                                                                                                  <  3:40694/149‑1 (MQ=255)
                                                    gtgtATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAg                                                                                               <  7:295957/148‑1 (MQ=255)
                                                    gtgtATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAg                                                                                               <  4:32245/148‑1 (MQ=255)
                                                     tgtATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGt                                                                                              <  6:115281/148‑1 (MQ=255)
                                                         tCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCAcc                                                                                                             <  4:168408/130‑1 (MQ=255)
                                                         tCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCAcc                                                                                                             >  3:168408/1‑130 (MQ=255)
                                                           gacgaGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTGCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATcg                                                                                       >  8:64243/1‑149 (MQ=255)
                                                              gagaGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCgcgc                                                                                    >  7:215082/1‑149 (MQ=255)
                                                                gagCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTGGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTc                                                                                  <  5:75377/149‑1 (MQ=255)
                                                                 agCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCa                                                                                 <  3:275205/149‑1 (MQ=255)
                                                                   ccGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAg                                                                                                                 >  4:110890/1‑116 (MQ=255)
                                                                   ccGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAg                                                                                                                 <  3:110890/116‑1 (MQ=255)
                                                                       cccGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCTAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTgc                                                                           <  8:223126/149‑1 (MQ=255)
                                                                       cccGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGc                                                                                            >  2:227935/1‑132 (MQ=255)
                                                                       cccGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGc                                                                                            <  1:227935/132‑1 (MQ=255)
                                                                       cccGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTgc                                                                           <  4:39391/149‑1 (MQ=255)
                                                                       cccGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTgc                                                                           <  4:266744/149‑1 (MQ=255)
                                                                          gCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTgcgc                                                                         >  8:48362/1‑148 (MQ=255)
                                                                            aaCGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAAt                                                                      <  3:5232/149‑1 (MQ=255)
                                                                               ggTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAg                                                                   <  2:360401/149‑1 (MQ=255)
                                                                                gTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAgg                                                                  <  6:290854/149‑1 (MQ=255)
                                                                                  tattaCCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGc                                                                 >  2:184690/1‑148 (MQ=255)
                                                                                       cccTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAAtt                                                           >  2:82275/1‑149 (MQ=255)
                                                                                        ccTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTc                                                          >  6:210865/1‑149 (MQ=255)
                                                                                         cTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTcc                                                         <  6:92615/149‑1 (MQ=255)
                                                                                          ttGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCCCCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTcc                                                         >  2:199381/1‑148 (MQ=255)
                                                                                               gacgcgctggatcgaaagcgggcccggacggccaaaagctttcgaaccagCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTc                                                    >  1:52221‑M2/51‑148 (MQ=255)
                                                                                               aCGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTcc                                                   >  2:122319/1‑149 (MQ=255)
                                                                                               aCGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTc                                                    >  5:16053/1‑148 (MQ=255)
                                                                                                   gTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGt                                               <  1:184690/149‑1 (MQ=255)
                                                                                                      tggatcgaaagcgggcctggacggccgaaagctttcgaaccagCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGc                                            >  1:184976‑M2/44‑149 (MQ=255)
                                                                                                       GGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGcc                                           <  7:344559‑M1/149‑1 (MQ=255)
                                                                                                        gatcgaaagcgggcctggacggccgaaagctttcgaaccagCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCa                                                                    >  8:33472‑M2/42‑123 (MQ=255)
                                                                                                        gatcgaaagcgggcctggacggccgaaagctttcgaaccagCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCa                                                                    <  7:33472‑M2/82‑1 (MQ=255)
                                                                                                        GTTCGAAAGCTTTCGGCCGTCCATGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGAGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGcc                                           >  8:214221‑M1/1‑148 (MQ=255)
                                                                                                        GTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGccc                                          <  2:275471‑M1/149‑1 (MQ=255)
                                                                                                         ttCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCt                                         >  3:19625/1‑149 (MQ=255)
                                                                                                         atcgaaagcgggcctggacggccgaaagctttcgaaccagCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCt                                         >  6:105020‑M2/41‑149 (MQ=255)
                                                                                                                 cTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGcc                                 >  2:257899/1‑149 (MQ=255)
                                                                                                                  tttCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCt                                >  6:134159/1‑149 (MQ=255)
                                                                                                                    tCGGCCGTCCGGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGcc                                 <  7:173401/146‑1 (MQ=255)
                                                                                                                    tCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCg                              >  5:100937/1‑149 (MQ=255)
                                                                                                                        ccGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGtgtg                          <  4:347326/149‑1 (MQ=255)
                                                                                                                          gTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTggg                        <  3:358282/149‑1 (MQ=255)
                                                                                                                             cAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTg                     >  3:237071/1‑149 (MQ=255)
                                                                                                                                  ccGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCGTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCtg                 >  1:306113/1‑149 (MQ=255)
                                                                                                                                  ccGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCtgt                <  8:344559/149‑1 (MQ=255)
                                                                                                                                   cGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCt                  <  2:189763/146‑1 (MQ=255)
                                                                                                                                   cGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCt                  >  1:189763/1‑146 (MQ=255)
                                                                                                                                    gctttcgaaccagCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCTGTGc              <  5:105020‑M2/136‑1 (MQ=255)
                                                                                                                                     cTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCTGTGcc             <  5:134159/149‑1 (MQ=255)
                                                                                                                                        tCGATCCAGCGGGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCAGAAACCATGAGTGCCATCGCGCTCAAGCTGCTCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCTGTGCCtt           <  6:369244/148‑1 (MQ=255)
                                                                                                                                        tCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCTGTGCCtt           <  6:363735/148‑1 (MQ=255)
                                                                                                                                        tCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCTGTGCCtt           <  6:210567/148‑1 (MQ=255)
                                                                                                                                         cGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGAACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCAAGGTAGCACTGCATCGCCTCGTGTGGGTTGTCTGTGCCTTCa         >  7:182774/1‑149 (MQ=255)
                                                                                                                                          gATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCTGTGCCTTCAt        <  4:237071/149‑1 (MQ=255)
                                                                                                                                            tCCAGCGAGTCGTTTCAAATACCACCGTGTATACGGTTCAAAGCACCCTGAAACAATGAGTTCCATCGCTCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGTTAGCCCTGCATCGCCTCGTGTGTGTTGTCTGTGCCTTCATAg      <  3:97566/149‑1 (MQ=255)
                                                                                                                                              cagCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGccc                                          >  3:352892‑M2/4‑111 (MQ=255)
                                                                                                                                              cagCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGGCCAGGTAGccc                                          <  4:352892‑M2/108‑1 (MQ=255)
                                                                                                                                               agCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCTGTGCCTTCATAGGGa   >  1:158795‑M2/3‑149 (MQ=255)
                                                                                                                                                gCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCTGTGCCTTCATAGGGAc  >  5:54837‑M2/2‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
GTACCACTGAGTATCTGGTACAGGCTCCGTTGATCATCACTCATCAAGCGTTGTGTATCGACGAGAGCCGACCCGCAACGGTTATTACCCTTGTAACGCGTCTGGTTCGAAAGCTTTCGGCCGTCCAGGCCCGCTTTCGATCCAGCGCGTCGTTTCAAATACCACCGTGGATACGGTTCAAAGCACCCTGAAACCATGAGTGCCATCGCGCTCAAGCTGCGCAATCAGGCCAAATTCCCAGTCCAGGTAGCCCTGCATCGCCTCGTGTGGGTTGTCTGTGCCTTCATAGGGAC  >  NC_002947/3648539‑3648831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.