New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4407585	58 (0.940)	5 (0.080)	5/254	NT	7.9%	coding (259/1299 nt)	PP_3889	putative Phage integrase
	?	NC_002947	= 4407635	62 (1.050)					coding (209/1299 nt)	PP_3889	putative Phage integrase

CGCCTAAGCACGGCCGCACATGCTGCCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAA  >  NC_002947/4407441‑4407732                                                                                                                                                  |                                                                                                                                                     cGCCTAAGCACGGCCGCACATGCTGCCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGGCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACcggtgcggt‑g                                                                                                                                                 <  8:358437/149‑1 (MQ=255)  gCCTAAGCACGGCCGCACATGCTGCCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCTATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑gg                                                                                                                                                <  7:257357/149‑1 (MQ=255)   ccTAAGCACGGCCGCACATGCTGCCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGACCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGc                                                                                                                                               >  3:297513/1‑149 (MQ=255)         cACGGCCGCACATGCTGCCCAATTGCTGCACGGGTGTGCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGCCATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCggtt                                                                                                                                          >  1:259203/1‑147 (MQ=255)                   caTGCTGCCCAATTGCTGCGTGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAgg                                                                                                                               <  1:164299/149‑1 (MQ=255)                     tgctgcCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGgcg                                                                                                                             <  2:260836/149‑1 (MQ=255)                      gctgcCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGgcgc                                                                                                                            >  4:30040/1‑149 (MQ=255)                        tgcCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCtggccgagctgcccgcgctgcgtcagc                                                                                                                           >  8:62609‑M1/1‑122 (MQ=255)                        tgcCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAgg                                                                                                                               <  1:165109/144‑1 (MQ=255)                        tgcCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAgg                                                                                                                               >  2:165109/1‑144 (MQ=255)                        tgcCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTg                                                                                                                          >  2:67710/1‑149 (MQ=255)                          cccAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGa                                                                                                                         <  7:217041/148‑1 (MQ=255)                          cccAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGAc                                                                                                                        >  3:337846/1‑149 (MQ=255)                          cccAACTCCTTCGCGGGTG‑GCACCCCTACGCTTGGCAGACAACGCGCGTCCATGGCGCATGCGGTCGAGATACCTGTCGAGCATTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGG‑GGCCTGGTGGCGCATCAGGCCCAGAc                                                                                                                        <  6:301741/149‑1 (MQ=255)                                   tgcGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCtggccgagctgcccgcgctgcgtcagcgcctgatgcgc                                                                                                                >  4:225981‑M1/1‑111 (MQ=255)                                   tgcGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCgg                                                                                                               >  8:8017/1‑149 (MQ=255)                                    gcgcGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCggg                                                                                                              >  5:297480/1‑149 (MQ=255)                                     cgcgGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCggg                                                                                                              <  5:390869/148‑1 (MQ=255)                                     cgcgGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCgg                                                                                                               <  1:27767/147‑1 (MQ=255)                                     cgcgGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGc                                                                                                             <  3:30040/149‑1 (MQ=255)                                     cgcgGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGACCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCggg                                                                                                              <  4:297513/148‑1 (MQ=255)                                     cacgGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCggg                                                                                                              <  2:259203/146‑1 (MQ=255)                                            g‑gCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCg                                                                                                       <  8:295759/148‑1 (MQ=255)                                                aGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGc                                                                                                     >  5:107014/1‑147 (MQ=255)                                                  ccTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAg                                                                                                  <  1:347174‑M2/148‑2 (MQ=255)                                                  ccTAACGCTTAGCAGACAACGAGCTAACATAGCTCATGCCCTCGACATACCAGTCGAGCAGATAGCCCACGCTGGCCATGCCCGACACTACAGCTGCCGT‑CCACGCGTGCCGCATCACGCGCTGACGCACCCCGGGCAGCTCCGCAAg                                                                                                  >  8:24016/1‑148 (MQ=255)                                                    ttACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcac                                                                                               <  6:149898‑M2/149‑5 (MQ=255)                                                     tACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcacc                                                                                              <  2:179295‑M2/149‑6 (MQ=255)                                                      aCGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCtggccgagctgcccgcgctgcgtcagcgcctgatgcgccacccggccaccgcac                                                                                                <  5:362464‑M1/147‑55 (MQ=255)                                                       cGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCtggccgagctgcccgcgctgcgtcagcgcctgatgcgccacccggccaccgcaccg                                                                                              <  7:62609‑M1/148‑57 (MQ=255)                                                         cTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCtggccgagctgcccgcgctgcgtcagcgcctgatgcgccacccggccaccgcaccggta                                                                                           <  3:225981‑M1/149‑60 (MQ=255)                                                                gACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCt                                                                                   <  1:179295/149‑1 (MQ=255)                                                                   aaCGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCGCGCTcca                                                                                >  4:299703/1‑147 (MQ=255)                                                                   aaCGAGCGATCATGGCTCATGCGGTCGACATACCAGTCCAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCaa                                                                                <  2:330341/149‑1 (MQ=255)                                                                     cGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGAGACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACt                                                                              <  7:5406/149‑1 (MQ=255)                                                                        gCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAg                                                                           <  7:128957/149‑1 (MQ=255)                                                                        gCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAg                                                                           >  5:57361/1‑149 (MQ=255)                                                                        gCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAg                                                                           <  2:347174/149‑1 (MQ=255)                                                                              aTGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCaa                                                                                <  6:274981/138‑1 (MQ=255)                                                                              aTGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCaa                                                                                >  5:274981/1‑138 (MQ=255)                                                                                 gCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGCCAGAGCGCGGGCAGCTCGGCCAGCACCGCCGCCCCGCTCAACTCAGGCCAGCggg                                                                  >  1:320650/1‑149 (MQ=255)                                                                                 gCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCTGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCggg                                                                  <  1:73673/149‑1 (MQ=255)                                                                                  cTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGCT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCATCTAAGGCCAGCGGGc                                                                 >  3:223637/1‑149 (MQ=255)                                                                                     aTGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGAt                                                              <  4:301792/149‑1 (MQ=255)                                                                                         ggTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTTACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGt                                                          <  1:243769/149‑1 (MQ=255)                                                                                         ggTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCgg                                                                                                               >  1:282218/1‑96 (MQ=255)                                                                                         ggTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCgg                                                                                                               <  2:282218/96‑1 (MQ=255)                                                                                            cGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCATGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTAc                                                        <  7:24016/148‑1 (MQ=255)                                                                                              aCATACCAGTCGAGCAGTGGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCa                                                     <  6:131405/149‑1 (MQ=255)                                                                                                aTACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCAtt                                                   >  1:322270/1‑149 (MQ=255)                                                                                                   ccAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTc                                                 <  1:67710/148‑1 (MQ=255)                                                                                                     aGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTg                                              >  6:30836/1‑149 (MQ=255)                                                                                                       tCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGcc                                            <  4:337846/149‑1 (MQ=255)                                                                                                         gAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCcgc                                          >  4:274851/1‑149 (MQ=255)                                                                                                                   cccACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGcc                                            >  4:161993/1‑137 (MQ=255)                                                                                                                   cccACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGGGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGcc                                            <  3:161993/137‑1 (MQ=255)                                                                                                                    ccACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGc                               >  5:204656/1‑149 (MQ=255)                                                                                                                     cACGGTGGCCATGCCCGCCACTACCGGTGCGGTGGGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGc                               >  1:248926/1‑149 (MQ=255)                                                                                                                            gCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTAc                        >  2:41293/1‑148 (MQ=255)                                                                                                                             ccATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCTTCAGGCGCTGCCGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCCCCAGGTGCCAGGTACCa                      >  8:143579/1‑149 (MQ=255)                                                                                                                                 gCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCt                  >  5:173698/1‑149 (MQ=255)                                                                                                                                   ccGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCa                >  7:3057/1‑149 (MQ=255)                                                                                                                                   ccGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCa                >  8:48347/1‑149 (MQ=255)                                                                                                                                         cTACGGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGgctg          <  6:297480/149‑1 (MQ=255)                                                                                                                                          tACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaag         <  3:225981‑M2/149‑91 (MQ=255)                                                                                                                                          tACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGgctgc         >  7:319032/1‑149 (MQ=255)                                                                                                                                           aCCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGcc                                            >  1:377579/1‑113 (MQ=255)                                                                                                                                           aCCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGcc                                            <  2:377579/113‑1 (MQ=255)                                                                                                                                             cggtgcggt‑gGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaagcg       <  7:62609‑M2/148‑93 (MQ=255)                                                                                                                                             cggtgcggt‑gGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTAc                        >  2:312714/1‑131 (MQ=255)                                                                                                                                              ggTGCtggccgagctgcccgcgctgcgtcagcgcctgatgcgccacccggccaccgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaagcgta      <  2:179295‑M1/149‑145 (MQ=255)                                                                                                                                               gtgcggt‑gGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaagcgt      <  5:362464‑M2/147‑94 (MQ=255)                                                                                                                                               gTGCtggccgagctgcccgcgctgcgtcagcgcctgatgcgccacccggccaccgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaagcgtaa     <  6:149898‑M1/149‑146 (MQ=255)                                                                                                                                                  ctggccgagctgcccgcgctgcgtcagcgcctgatgcgccacccggccaccgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaagcgtaagg   <  1:347174‑M1/148‑148 (MQ=255)                                                                                                                                                  cggt‑gGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCaaaa  <  2:320650/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CGCCTAAGCACGGCCGCACATGCTGCCCAATTGCTGCGCGGGTG‑GCAGCCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAA  >  NC_002947/4407441‑4407732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.