New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4407585	58 (0.940)	5 (0.080)	5/254	NT	7.9%	coding (259/1299 nt)	PP_3889	putative Phage integrase
	?	NC_002947	= 4407635	62 (1.050)					coding (209/1299 nt)	PP_3889	putative Phage integrase

CCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACGCAGGTCGCGCACCGA  >  NC_002947/4407489‑4407780                                                                                                                                                    |                                                                                                                                                   ccTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAg                                                                                                                                                   <  1:347174‑M2/148‑2 (MQ=255) ccTAACGCTTAGCAGACAACGAGCTAACATAGCTCATGCCCTCGACATACCAGTCGAGCAGATAGCCCACGCTGGCCATGCCCGACACTACAGCTGCCGT‑CCACGCGTGCCGCATCACGCGCTGACGCACCCCGGGCAGCTCCGCAAg                                                                                                                                                   >  8:24016/1‑148 (MQ=255)   ttACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcac                                                                                                                                                <  6:149898‑M2/149‑5 (MQ=255)    tACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcacc                                                                                                                                               <  2:179295‑M2/149‑6 (MQ=255)               gACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCt                                                                                                                                   <  1:179295/149‑1 (MQ=255)                  aaCGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCGC‑GCTcca                                                                                                                                >  4:299703/1‑147 (MQ=255)                  aaCGAGCGATCATGGCTCATGCGGTCGACATACCAGTCCAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCaa                                                                                                                                <  2:330341/149‑1 (MQ=255)                    cGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGAGACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACt                                                                                                                              <  7:5406/149‑1 (MQ=255)                       gCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAg                                                                                                                           >  5:57361/1‑149 (MQ=255)                       gCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAg                                                                                                                           <  7:128957/149‑1 (MQ=255)                       gCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAg                                                                                                                           <  2:347174/149‑1 (MQ=255)                             aTGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCaa                                                                                                                                >  5:274981/1‑138 (MQ=255)                             aTGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCaa                                                                                                                                <  6:274981/138‑1 (MQ=255)                                gCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGCCAGAGCGCGGGCAGCTCGGCCAGCACCGCCGCCCC‑GCTCAACTCAGGCCAGCggg                                                                                                                  >  1:320650/1‑149 (MQ=255)                                gCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCTGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCggg                                                                                                                  <  1:73673/149‑1 (MQ=255)                                 cTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGCT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCATCTAAGGCCAGCGGGc                                                                                                                 >  3:223637/1‑149 (MQ=255)                                    aTGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGAt                                                                                                              <  4:301792/149‑1 (MQ=255)                                        ggTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTTACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGt                                                                                                          <  1:243769/149‑1 (MQ=255)                                           cGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCATGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTAc                                                                                                        <  7:24016/148‑1 (MQ=255)                                             aCATACCAGTCGAGCAGTGGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCa                                                                                                     <  6:131405/149‑1 (MQ=255)                                               aTACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCAtt                                                                                                   >  1:322270/1‑149 (MQ=255)                                                  ccAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTc                                                                                                 <  1:67710/148‑1 (MQ=255)                                                    aGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTg                                                                                              >  6:30836/1‑149 (MQ=255)                                                      tCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGcc                                                                                            <  4:337846/149‑1 (MQ=255)                                                        gAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCcgc                                                                                          >  4:274851/1‑149 (MQ=255)                                                                  cccACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGcc                                                                                            >  4:161993/1‑137 (MQ=255)                                                                  cccACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGGGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGcc                                                                                            <  3:161993/137‑1 (MQ=255)                                                                   ccACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGc                                                                               >  5:204656/1‑149 (MQ=255)                                                                    cACGGTGGCCATGCCCGCCACTACCGGTGCGGTGGGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGc                                                                               >  1:248926/1‑149 (MQ=255)                                                                           gCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTAc                                                                        >  2:41293/1‑148 (MQ=255)                                                                            ccATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCTTCAGGCGCTGCCGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCCCCAGGTGCCAGGTACCa                                                                      >  8:143579/1‑149 (MQ=255)                                                                                gCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCt                                                                  >  5:173698/1‑149 (MQ=255)                                                                                  ccGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCa                                                                >  8:48347/1‑149 (MQ=255)                                                                                  ccGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCa                                                                >  7:3057/1‑149 (MQ=255)                                                                                        cTACGGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGgctg                                                          <  6:297480/149‑1 (MQ=255)                                                                                         tACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaag                                                          <  3:225981‑M2/149‑91 (MQ=255)                                                                                         tACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGgctgc                                                         >  7:319032/1‑149 (MQ=255)                                                                                          aCCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGcc                                                                                            <  2:377579/113‑1 (MQ=255)                                                                                          aCCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGcc                                                                                            >  1:377579/1‑113 (MQ=255)                                                                                            cggtgcggt‑gGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaagcg                                                        <  7:62609‑M2/148‑93 (MQ=255)                                                                                            cggtgcggt‑gGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTAc                                                                        >  2:312714/1‑131 (MQ=255)                                                                                              gtgcggt‑gGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaagcgt                                                       <  5:362464‑M2/147‑94 (MQ=255)                                                                                                 cggt‑gGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCaaaa                                                  <  2:320650/148‑1 (MQ=255)                                                                                                    t‑gGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTAGCACGCTCACGGCTGCTCCAAAAgcgc                                              <  2:322270/149‑1 (MQ=255)                                                                                                       gCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCATGTACCACGCTCACGGCTGCTCCAAAAGCGCAg                                            >  6:309584/1‑149 (MQ=255)                                                                                                       gCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAg                                            <  6:107014/149‑1 (MQ=255)                                                                                                        ccGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGACCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAgg                                           <  5:88153/149‑1 (MQ=255)                                                                                                             tGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAg                                      <  5:30836/149‑1 (MQ=255)                                                                                                               gcgcATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaagcgtaaggctgccacccgcgca                                     >  4:225981‑M2/1‑38 (MQ=255)                                                                                                               gcgcATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGc                                    >  8:119008/1‑149 (MQ=255)                                                                                                                 gcctCAGGCGCGGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCACGCCAGCGGGCGATCGGTACGCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCg                                  <  8:144264/146‑1 (MQ=255)                                                                                                                    tCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCACGGCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCaaaa                                                  >  1:281391/1‑131 (MQ=255)                                                                                                                    tCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCaaaa                                                  <  2:281391/130‑1 (MQ=255)                                                                                                                      aGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGt                              >  3:63488/1‑148 (MQ=255)                                                                                                                        gcgcTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGAc                           >  1:14595/1‑149 (MQ=255)                                                                                                                          gcTGACGCAGCGCGGGCAGCTCGGCCAgcaccggtagtgtcgggcatggccaccgtgggccaactgctcgactggtatgtcgaccgcatgagccatgatcgctcgttgtctgcaaagcgtaaggctgccacccgcgcagcaattgggca                          >  8:62609‑M2/1‑27 (MQ=255)                                                                                                                          gcTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGAcgc                         <  7:119008/149‑1 (MQ=255)                                                                                                                          gcTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGCGTGAccc                         >  1:326968/1‑147 (MQ=255)                                                                                                                              aCGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCgg                       <  8:3057/147‑1 (MQ=255)                                                                                                                              aCGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGt                     <  8:319032/149‑1 (MQ=255)                                                                                                                                gCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCa                                                                >  6:194579/1‑104 (MQ=255)                                                                                                                                gCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCa                                                                <  5:194579/104‑1 (MQ=255)                                                                                                                                  aGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACg                 >  3:162274/1‑149 (MQ=255)                                                                                                                                     gcgGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGCGTGACCCGCGTCAccccg              <  2:326968/149‑5 (MQ=255)                                                                                                                                        ggCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACGCAGGTc           <  7:48347/149‑1 (MQ=255)                                                                                                                                         gCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACGCAGGTcg          <  6:57361/149‑1 (MQ=255)                                                                                                                                         gCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACGCAGGTcg          >  2:369313/1‑149 (MQ=255)                                                                                                                                            gCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACGCAGGTcgcg        >  7:306647/1‑148 (MQ=255)                                                                                                                                            gCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACGCAGGTcgcg        >  5:206490/1‑148 (MQ=255)                                                                                                                                             cTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACGCAGGTcgc         >  7:189376/1‑146 (MQ=255)                                                                                                                                             cTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACGCAGGTcgc         <  8:189376/146‑1 (MQ=255)                                                                                                                                                 gCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACGCAGGTCGCGCACCGa  >  4:232813/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CCTTACGCTTTGCAGACAACGAGCGATCATGGCTCATGCGGTCGACATACCAGTCGAGCAGTTGGCCCACGGTGGCCATGCCCGACACTACCGGTGCGGT‑GGCCGGGTGGCGCATCAGGCGCTGACGCAGCGCGGGCAGCTCGGCCAGCACCGCCGCCAC‑GCTCAACTCAGGCCAGCGGGCGATCGGTACCCATTTCTTGCCGCGCACCAGGTGCCAGGTACCACGCTCACGGCTGCTCCAAAAGCGCAGGTACAGGCCGGGGTGACGCGGGTCACGCAGGTCGCGCACCGA  >  NC_002947/4407489‑4407780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.