New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4955433	65 (1.050)	4 (0.070)	4/248	NT	5.9%	coding (1322/1374 nt)	fliI	flagellum‑specific ATP synthase
	?	NC_002947	= 4955456	66 (1.140)					coding (1299/1374 nt)	fliI	flagellum‑specific ATP synthase

ATGGCCAAGGCGCTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCTTTGCGACAGGCGCGACCACAGTT  >  NC_002947/4955285‑4955580                                                                                                                                                       |                                                                                                                                                    aTGGCCAAGGCGCTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCA                                                                                                                                                     >  4:116852‑M1/1‑149 (MQ=255)     ccAAGGCGCTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCC‑GGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCAgggcc                                                                                                                                                >  4:304933‑M1/1‑144 (MQ=255)      cAAGGCGCTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCCCCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGccc                                                                                                                                                >  2:256247/1‑149 (MQ=255)      cAAGGCGCTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCCCCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGccc                                                                                                                                                >  7:313175/1‑149 (MQ=255)      cAAGGCGCTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGcc                                                                                                                                                 >  8:124547/1‑148 (MQ=255)      cAAGGCGCTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGcc                                                                                                                                                 >  8:30424/1‑148 (MQ=255)       aaGGCGCTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCa                                                                                                                                               >  2:57589/1‑149 (MQ=255)       aaGGCGCTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCa                                                                                                                                               >  2:134745/1‑149 (MQ=255)            gcTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTtc                                                                                                                                          >  1:261036/1‑149 (MQ=255)               gAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCCCCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCGGTTCGCGGCTCTGCGCCATGCCCACGTTCTcg                                                                                                                                       >  6:310334/1‑149 (MQ=255)                aGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTtctc                                                                                                                                        <  8:46872/147‑1 (MQ=255)                   cgccTTGCGCTCGGCCTCCTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCa                                                                                                                                   <  3:35431/149‑1 (MQ=255)                    gccTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAg                                                                                                                                  >  2:268728/1‑149 (MQ=255)                      cTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGc                                                                                                                                <  1:239203/149‑1 (MQ=255)                          cgcTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCtg                                                                                                                            >  6:77866‑M2/1‑147 (MQ=255)                           gcTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCTCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCAgggcctgcgcgagaacgtgggcaggg                                                                                                                           >  8:22212‑M1/1‑123 (MQ=255)                            cTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCtggc                                                                                                                          <  3:333347‑M2/149‑5 (MQ=255)                               ggCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCtggcg                                                                                                                         >  5:310334‑M2/1‑142 (MQ=255)                               ggCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCC‑GGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCAgggcctgcgcgagaacgtgggcatggcgcag                                                                                                                      <  3:304933‑M1/149‑32 (MQ=255)                                 ccTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCAgggcctgcgcgagaacgtgggcatggcgcaga                                                                                                                     <  7:22212‑M1/149‑33 (MQ=255)                                  ctctTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCAgggcctgcgcgagaacgtgggcatggcgcagag                                                                                                                    <  7:294735‑M1/149‑34 (MQ=255)                                     ttCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTACTCGCGCAGGCCCTGCCCCAGaaaat                                                                                                                 >  8:148154/1‑147 (MQ=255)                                      tCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACt                                                                                                                 >  6:110395/1‑148 (MQ=255)                                       cGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTGAAAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGaaa                                                                                                                   <  4:106747/146‑1 (MQ=255)                                        ggCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCaa                                                                                                              >  1:170898/1‑149 (MQ=255)                                        ggCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCaa                                                                                                              <  1:57589/149‑1 (MQ=255)                                        ggCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCa                                                                                                               <  3:157715/148‑1 (MQ=255)                                         gCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAAc                                                                                                             <  8:120142/149‑1 (MQ=255)                                          ccATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAAcc                                                                                                            >  7:342014/1‑149 (MQ=255)                                               tCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCATG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCtt                                                                                                       <  2:207/149‑1 (MQ=255)                                                  accaccGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCCGGCCCTGGCGCAGAAACTACACCAGCTTCGa                                                                                                    >  6:232532/1‑149 (MQ=255)                                                  accaccGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGa                                                                                                    >  6:56252/1‑149 (MQ=255)                                                    caccGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATCTAACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGAt                                                                                                   >  1:280500/1‑149 (MQ=255)                                                    caccGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGAtt                                                                                                  >  1:209670/1‑149 (MQ=255)                                                     accGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCtt                                                                                                       <  2:382895/143‑1 (MQ=255)                                                     accGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCtt                                                                                                       >  1:382895/1‑143 (MQ=255)                                                        ggCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCaa                                                                                              <  1:146588/149‑1 (MQ=255)                                                         gcgcCAGGCTCGCGGCACGTCCGGTCATCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGGTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAg                                                                                             <  2:141913/149‑1 (MQ=255)                                                         gcgcCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAg                                                                                             <  8:313175/149‑1 (MQ=255)                                                          cgcCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAgg                                                                                            <  8:226125/149‑1 (MQ=255)                                                              aGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAAc                                                                                                             >  6:335717/1‑128 (MQ=255)                                                              aGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAAc                                                                                                             <  5:335717/128‑1 (MQ=255)                                                              aGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAAt                                                                                        <  7:124547/149‑1 (MQ=255)                                                                gcgcgcGGCACGTCCGGGCAGCGCCATGGCTTATC‑ACCCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATgg                                                                                      <  4:227965/149‑1 (MQ=255)                                                                 cgcgcgGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGc                                                                                     <  4:333347/149‑1 (MQ=255)                                                                      ggCACGTCCGGGCAGCGACATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGt                                                                                <  5:232532/149‑1 (MQ=255)                                                                            tCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGtct                                                                          >  5:157234/1‑149 (MQ=255)                                                                                ggCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCg                                                                       >  8:99486/1‑148 (MQ=255)                                                                                     cgcCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCAc                                                                 >  6:55994/1‑149 (MQ=255)                                                                                        cATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGc                                                              <  2:261036/149‑1 (MQ=255)                                                                                         aTGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGcc                                                             <  5:110395/149‑1 (MQ=255)                                                                                           ggCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAg                                                           >  6:339284/1‑149 (MQ=255)                                                                                            gCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAg                                                           <  7:26507/148‑1 (MQ=255)                                                                                                aTC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTtc                                                                                                                                          >  4:92133/1‑65 (MQ=255)                                                                                                aTC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTtc                                                                                                                                          <  3:92133/65‑1 (MQ=255)                                                                                                 tC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACAt                                                     <  7:30424/149‑1 (MQ=255)                                                                                                    aaCCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAg                                                   >  8:287689/1‑149 (MQ=255)                                                                                                    aaCCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAg                                                   <  7:148154/149‑1 (MQ=255)                                                                                                     aCCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAgg                                                  >  8:274677/1‑149 (MQ=255)                                                                                                       cTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCa                                                <  5:56252/149‑1 (MQ=255)                                                                                                       cTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCa                                                >  1:99623/1‑149 (MQ=255)                                                                                                       cTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCa                                                >  4:302312/1‑149 (MQ=255)                                                                                                             ggggCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCACCCAGCTTCGATTGCCAGGCACTGGCCAGGGCAGTCTCCGGCGCACCGCCACCTACATCGGCCCCcgcg                                          >  4:232067/1‑149 (MQ=255)                                                                                                                  gTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGa                                      >  2:312984/1‑148 (MQ=255)                                                                                                                  gTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGAt                                     >  1:61413/1‑149 (MQ=255)                                                                                                                   tG‑AAAATCGCCCCCAGCTGGTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATc                                    <  4:28112/149‑1 (MQ=255)                                                                                                                    g‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACa                                                      <  4:17920/130‑1 (MQ=255)                                                                                                                    g‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACa                                                      >  3:17920/1‑130 (MQ=255)                                                                                                                        aaccacccccAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATc                                    <  1:134745/140‑1 (MQ=255)                                                                                                                            gCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTcgc                             <  7:99486/148‑1 (MQ=255)                                                                                                                              ccccAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGAt                                                                    <  1:14228/107‑1 (MQ=255)                                                                                                                              ccccAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGAt                                                                    >  2:14228/1‑107 (MQ=255)                                                                                                                                ccAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCtt                        >  1:318754/1‑149 (MQ=255)                                                                                                                                 cAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCttt                       <  3:116852/149‑1 (MQ=255)                                                                                                                                  aGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCTTTg                      <  8:254796/149‑1 (MQ=255)                                                                                                                                       ttCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCTTTGCGa                   <  2:280500/147‑1 (MQ=255)                                                                                                                                        tCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCTTTGCGACAg                >  7:84077/1‑149 (MQ=255)                                                                                                                                         cgcgGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCTTTGCGACAg                <  2:99623/148‑1 (MQ=255)                                                                                                                                              ctctGCGCCATGCCCACGTTCTCGCGCAGGCCCtggcgcagagccgcgaacagctgggggcgattttcacgcccccggcaggttgataagccatggcgctgcccggacgtgccgcgcgcctggcgccggtggtggacatggccgaagag          <  7:294735‑M2/149‑117 (MQ=255)                                                                                                                                               tctGCGCCATGCCCACGTTCTCGCGCAGGCCCtggcgcagagccgcgaacagctgggggcgattttcacgcccccggcaggttgataagccatggcgctgcccggacgtgccgcgcgcctggcgccggtggtggacatggccgaagagg         <  7:22212‑M2/149‑118 (MQ=255)                                                                                                                                                ctGCGCCATGCCCACGTTCTCGCGCAGGCCCtggcgcagagccgcgaacagctgggggcgattttcacgccccggcaggttgataagccatggcgctgcccggacgtgccgcgcgcctggcgccggtggtggacatggccgaagaggcc        <  3:304933‑M2/149‑119 (MQ=255)                                                                                                                                                   cgcCAgggcctgcgcgagaacgtgggcatggcgcagagccgcgaacagctgggggcgattttcacgcccccggcaggttgataagccatggcgctgcccggacgtgccgcgcgcctggcgccggtggtggacatggccgaagaggcc       >  5:310334‑M1/1‑5 (MQ=255)                                                                                                                                                   cgcCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCTTTGCGACAGGCGCGAcc        <  3:121898/146‑1 (MQ=255)                                                                                                                                                   cgcCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCTTTGCGACAGGCGCGACca       <  2:209670/147‑1 (MQ=255)                                                                                                                                                    gcCAgggcctgcgcgagaacgtgggcatggcgcagagccgcgaacagctgggggcgattttcacgcccccggcaggttgataagccatggcgctgcccggacgtgccgcgcgcctggcgccggtggtggacatggccgaagaggccgag    <  3:333347‑M1/149‑146 (MQ=255)                                                                                                                                                     cccTGCCCACGTTCTCGCGCAGGCCCtggcgcagagccgcgaacagctgggggcgattttcacgcccccggcaggttgataagccatggagctgcccggacgtgccgcgcgcctggcgccggtggtggacatggccgaagaggccgagc   >  8:22212‑M2/1‑26 (MQ=255)                                                                                                                                                     ccATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCTTTGCGACAGGCGCGACCACAGt   >  2:354367/1‑149 (MQ=255)                                                                                                                                                      cAgggcctgcgcgagaacgtgggcatggcgcagagccgcgaacagctgggggcgattttcacgcccccggcaggttgataagccatggcgctgcccggacgtgccgcgcgcctggcgccggtggtggacatggccgaagaggccgagcg  >  6:77866‑M1/1‑2 (MQ=255)                                                                                                                                                       |                                                                                                                                                    ATGGCCAAGGCGCTGAGCCGCCTTGCGCTCGGCCTCTTCGGCCATGTCCACCACCGGCGCCAGGCGCGCGGCACGTCCGGGCAGCGCCATGGCTTATC‑AACCTGCCGGGGGCGTG‑AAAATCGCCCCCAGCTGTTCGCGGCTCTGCGCCATGCCCACGTTCTCGCGCAGGCCCTGGCGCAGAAACTCAACCAGCTTCGATTGCAAGGCAATGGCCAGGTCAGTCTCCGGATCACCGCCAGCTACATAGGCACCCACGCTGATCAGGTCGCGGCTTTGCGACAGGCGCGACCACAGTT  >  NC_002947/4955285‑4955580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.