New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5979607	75 (1.210)	6 (0.100)	5/254	NT	7.5%	coding (252/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	= 5979660	77 (1.300)					coding (305/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase

TCAGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACG  >  NC_002947/5979462‑5979753                                                                                                                                                  |                                                                                                                                                   tCAGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTc                                                                                                                                                 >  4:334021/1‑149 (MQ=255)   aGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCTCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTc                                                                                                                                                 <  8:16704/147‑1 (MQ=255)   aGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTc                                                                                                                                                 <  5:111947/147‑1 (MQ=255)   aGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTc                                                                                                                                                 <  1:376199/147‑1 (MQ=255)   aGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTc                                                                                                                                                 >  6:111947/1‑147 (MQ=255)   aGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGt                                                                                                                                               <  6:85910/149‑1 (MQ=255)   aGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGt                                                                                                                                               >  1:54586/1‑149 (MQ=255)   aGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGt                                                                                                                                               >  6:40841/1‑149 (MQ=255)   aGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGt                                                                                                                                               >  3:128529/1‑149 (MQ=255)     cTATTTCCGCCTGCGCGACCCAGCCAGAAATCAGGCCTGGATCGCGGTGAGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGATCGTGAGTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCGTCGTCGTTCGTgc                                                                                                                                             <  8:38959/149‑1 (MQ=255)     cTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTgc                                                                                                                                             >  6:279189/1‑149 (MQ=255)     cTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTgc                                                                                                                                             <  8:10098/149‑1 (MQ=255)        tttCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTgcgc                                                                                                                                           <  2:54586/148‑1 (MQ=255)             gCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACCTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGcc                                                                                                                                     >  8:199786/1‑149 (MQ=255)              ccTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGcc                                                                                                                                     >  2:341733/1‑148 (MQ=255)                      aCCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCg                                                                                                                            <  1:361661/149‑1 (MQ=255)                        ccAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGtt                                                                                                                          >  8:200032/1‑149 (MQ=255)                        ccAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGtt                                                                                                                          >  7:312941/1‑149 (MQ=255)                         cAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTg                                                                                                                         >  5:156799/1‑149 (MQ=255)                         cAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTg                                                                                                                         >  7:200129/1‑149 (MQ=255)                            ccACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGTCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTg                                                                                                                      <  3:230403/149‑1 (MQ=255)                            ccACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTg                                                                                                                      <  7:200032/149‑1 (MQ=255)                            ccACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTg                                                                                                                      <  6:273765/149‑1 (MQ=255)                            ccACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTg                                                                                                                      <  6:50721/149‑1 (MQ=255)                            ccACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTg                                                                                                                      <  7:27238/149‑1 (MQ=255)                             cacaAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGactgagcgcccggccgggtacaccagcaacg                                                                                                                     >  7:170165‑M1/1‑118 (MQ=255)                               caAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGgtg                                                                                                                   >  3:106084/1‑149 (MQ=255)                               caAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGgtg                                                                                                                   >  7:74802/1‑149 (MQ=255)                                aaaTCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGgtg                                                                                                                   >  2:10594/1‑148 (MQ=255)                                       gCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACccggc                                                                                                           >  6:303332/1‑149 (MQ=255)                                          tGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACccggccgg                                                                                                        >  6:107602/1‑149 (MQ=255)                                            gATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGgc                                                                                                      >  8:297636/1‑149 (MQ=255)                                              tCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGgcgc                                                                                                    <  4:106084/149‑1 (MQ=255)                                                 ccGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCt                                                                                                   >  6:154463/1‑147 (MQ=255)                                                 ccGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGGCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCa                                                                                                 <  3:35476/149‑1 (MQ=255)                                                      cgcgcgcCGCTCGAGGCCCCTTCCGCCTGGCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCCGTGGGCGGTGATCCCCTCGGCGTTCGGGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgc                                                                                            >  6:255174‑M2/1‑146 (MQ=255)                                                          cgccgcTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGactgagcgcccggccgggtacaccagcaacgggccttcggccgagcgcacgaacgccgag                                                                                        <  6:140380‑M1/149‑61 (MQ=255)                                                            ccgcTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGactgagcgcccggccgggtacaccagcaacgggccttcggccgagcgcacgaacgccgaggg                                                                                      <  2:223525‑M1/149‑63 (MQ=255)                                                            ccgcTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGactgagcgcccggccgggtacaccagcaacgggccttcggccgagcgcacgaacgccgaggg                                                                                      <  8:170165‑M1/149‑63 (MQ=255)                                                                     gCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTg                                                                              >  8:182756/1‑148 (MQ=255)                                                                     gCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGa                                                                             <  7:182756/149‑1 (MQ=255)                                                                        cgttCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAgg                                                                          <  5:292209/147‑1 (MQ=255)                                                                            ccGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAgg                                                                          <  6:59478/145‑1 (MQ=255)                                                                            ccGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAgg                                                                          >  5:59478/1‑145 (MQ=255)                                                                            ccGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGcc                                                                        <  6:135084/147‑1 (MQ=255)                                                                            ccGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCACTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGccc                                                                       <  6:208704/148‑1 (MQ=255)                                                                             cGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCctg                                                                     <  5:303332/149‑1 (MQ=255)                                                                             cGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCctg                                                                     <  8:200129/149‑1 (MQ=255)                                                                              gCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCctgc                                                                    <  5:154463/149‑1 (MQ=255)                                                                                   tCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCAc                                                               >  5:387645/1‑149 (MQ=255)                                                                                    cAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGaa                                                                                                                                  <  5:111497/81‑1 (MQ=255)                                                                                    cAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGaa                                                                                                                                  >  6:111497/1‑81 (MQ=255)                                                                                    cAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACt                                                              >  6:198398/1‑149 (MQ=255)                                                                                     aGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACt                                                              <  1:341733/148‑1 (MQ=255)                                                                                     aGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTg                                                             >  3:322126/1‑149 (MQ=255)                                                                                      gcgcCTGGAACGTGACTTCCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTg                                                             >  4:274984/1‑148 (MQ=255)                                                                                      gcgcCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTg                                                             >  6:184610/1‑148 (MQ=255)                                                                                       cgcCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGa                                                           <  4:322126/149‑1 (MQ=255)                                                                                                cGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTtct                                                  <  7:297636/149‑1 (MQ=255)                                                                                                 gTGACTTCCGACTGCAACTGGACCCGCATTGGGCGGTGATCGCCTCGGCGTTCGTGCGCTCGGCCGTAGGCCCGTTGCTTGTGTACCGGGCCGTGCGCTCAGTCGCCGACCTGATCGCTGATGGCCCTGCTGCTCTGGAGCCGTTtctc                                                 <  8:116468/149‑1 (MQ=255)                                                                                                 gTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTtctc                                                 <  8:74802/149‑1 (MQ=255)                                                                                                 gTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTtctc                                                 <  4:128529/149‑1 (MQ=255)                                                                                                   gACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTTGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCCCTGGAGCCGGTTCTCgc                                               >  8:268470/1‑148 (MQ=255)                                                                                                   gACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGa                                               >  2:36660/1‑149 (MQ=255)                                                                                                   gACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCACTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGa                                               >  4:53743/1‑149 (MQ=255)                                                                                                      tACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACAt                                            >  5:228798/1‑149 (MQ=255)                                                                                                         cGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGactgagcgcccggccgggtacaccagcaacgggccttcggccgagcgcacgaacgccgagggg                                                                                     <  8:184242‑M1/105‑64 (MQ=255)                                                                                                         cGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGactgagcgcccggccgggtacaccagcaacgggccttcggccgagcgcacgaacgccgagggg                                                                                     >  7:184242‑M1/1‑42 (MQ=255)                                                                                                         cGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATcgc                                         >  3:300968/1‑149 (MQ=255)                                                                                                          gCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATcgcg                                        <  3:334021/149‑1 (MQ=255)                                                                                                              gCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTg                                     >  2:35557/1‑148 (MQ=255)                                                                                                                aaCTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAAc                                  >  1:107960/1‑149 (MQ=255)                                                                                                                  cTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGc                                >  5:158302/1‑149 (MQ=255)                                                                                                                  cTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGc                                >  1:277668/1‑149 (MQ=255)                                                                                                                     gACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTg                              <  6:228798/148‑1 (MQ=255)                                                                                                                     gACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCCCGGTGAACGCTGc                             >  4:263393/1‑149 (MQ=255)                                                                                                                        ccGCAGTGGGCGGTGATTCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCa                          >  6:132781/1‑149 (MQ=255)                                                                                                                        ccGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCa                          >  3:211753/1‑149 (MQ=255)                                                                                                                        ccGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCa                          >  7:262188/1‑149 (MQ=255)                                                                                                                         cGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCAt                         <  5:107602/149‑1 (MQ=255)                                                                                                                         cGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCAt                         >  5:91614/1‑149 (MQ=255)                                                                                                                          gCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATg                        >  3:87045/1‑149 (MQ=255)                                                                                                                                ggCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTg                              >  8:246/1‑137 (MQ=255)                                                                                                                                ggCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTg                              <  7:246/137‑1 (MQ=255)                                                                                                                                ggCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTg                   <  6:134876/148‑1 (MQ=255)                                                                                                                                 gCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGgc                 <  5:198398/149‑1 (MQ=255)                                                                                                                                 gCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGgc                 >  2:57204/1‑149 (MQ=255)                                                                                                                                       aTCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCAGTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGGCCATGCGTTGGCGCAAgc           <  2:277668/149‑1 (MQ=255)                                                                                                                                       aTCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAgc           <  3:274984/149‑1 (MQ=255)                                                                                                                                         ccccTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcg                                                     >  7:184242‑M2/1‑63 (MQ=255)                                                                                                                                         ccccTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcg                                                     <  8:184242‑M2/105‑43 (MQ=255)                                                                                                                                          cccTCGGCGTTCGTGCGCTCGGCCGAAGGGCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCTCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCa        <  7:8898/149‑1 (MQ=255)                                                                                                                                          cccTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcggtagtcacgttccaggcgctgacaggcggaaggggcctcgagcgg        <  8:170165‑M2/149‑88 (MQ=255)                                                                                                                                          cccTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcggtagtcacgttccaggcgctgacaggcggaaggggcctcgagcgg        <  2:223525‑M2/149‑88 (MQ=255)                                                                                                                                            cTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcggtagtcacgttccaggcgctgacaggcggaaggggcctcgagcggcg      <  6:140380‑M2/149‑90 (MQ=255)                                                                                                                                            cTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCAc       >  4:254711/1‑148 (MQ=255)                                                                                                                                                gCGactgagcgcccggccgggtacaccagcaacgggccttcggccgagcgcccgaacgccgaggggatcaccgcccacggcgggtccagttgcaggcggtagtcacgttccaggcgctgccaggcggaaggggcctcgagcggcgcgcg  >  6:255174‑M1/1‑3 (MQ=255)                                                                                                                                                  gTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTg                   >  6:227901/1‑130 (MQ=255)                                                                                                                                                  gTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTg                   <  5:227901/130‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   TCAGCTATTTCCGCCTGCGCGACCCAGCCACAAATCAGGCCTGGATCGCCGTGCGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACG  >  NC_002947/5979462‑5979753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.