New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5979607	75 (1.210)	6 (0.100)	5/254	NT	7.5%	coding (252/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	= 5979660	77 (1.300)					coding (305/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase

CGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACATGTGTACCTGCGCGCCCACCAG  >  NC_002947/5979515‑5979808                                                                                                                                                  |                                                                                                                                                     cgcgcgcCGCTCGAGGCCCCTTCCGCCTGGCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCCGTGGGCGGTGATCCCCTCGGCGTTCGGGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgc                                                                                                                                                   >  6:255174‑M2/1‑146 (MQ=255)                gCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTg                                                                                                                                     >  8:182756/1‑148 (MQ=255)                gCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGa                                                                                                                                    <  7:182756/149‑1 (MQ=255)                   cgttCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAgg                                                                                                                                 <  5:292209/147‑1 (MQ=255)                       ccGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAgg                                                                                                                                 <  6:59478/145‑1 (MQ=255)                       ccGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAgg                                                                                                                                 >  5:59478/1‑145 (MQ=255)                       ccGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGcc                                                                                                                               <  6:135084/147‑1 (MQ=255)                       ccGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCACTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGccc                                                                                                                              <  6:208704/148‑1 (MQ=255)                        cGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCctg                                                                                                                            <  8:200129/149‑1 (MQ=255)                        cGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCctg                                                                                                                            <  5:303332/149‑1 (MQ=255)                         gCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCctgc                                                                                                                           <  5:154463/149‑1 (MQ=255)                              tCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCAc                                                                                                                      >  5:387645/1‑149 (MQ=255)                               cAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACt                                                                                                                     >  6:198398/1‑149 (MQ=255)                                aGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACt                                                                                                                     <  1:341733/148‑1 (MQ=255)                                aGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTg                                                                                                                    >  3:322126/1‑149 (MQ=255)                                 gcgcCTGGAACGTGACTTCCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTg                                                                                                                    >  4:274984/1‑148 (MQ=255)                                 gcgcCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTg                                                                                                                    >  6:184610/1‑148 (MQ=255)                                  cgcCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGa                                                                                                                  <  4:322126/149‑1 (MQ=255)                                           cGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTtct                                                                                                         <  7:297636/149‑1 (MQ=255)                                            gTGACTTCCGACTGCAACTGGACCCGCATTGGGCGGTGATCGCCTCGGCGTTCGTGCGCTCGGCCGTAGGCCCGTTGCTTGTGTACCGGGCCGTGCGCTCAGTCGCCGACCTGATCGCTGATGGCCCTGCTGCTCTGGAGCCGTTtctc                                                                                                        <  8:116468/149‑1 (MQ=255)                                            gTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTtctc                                                                                                        <  8:74802/149‑1 (MQ=255)                                            gTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTtctc                                                                                                        <  4:128529/149‑1 (MQ=255)                                              gACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTTGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCCCTGGAGCCGGTTCTCgc                                                                                                      >  8:268470/1‑148 (MQ=255)                                              gACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGa                                                                                                      >  2:36660/1‑149 (MQ=255)                                              gACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCACTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGa                                                                                                      >  4:53743/1‑149 (MQ=255)                                                 tACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACAt                                                                                                   >  5:228798/1‑149 (MQ=255)                                                    cGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATcgc                                                                                                >  3:300968/1‑149 (MQ=255)                                                     gCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATcgcg                                                                                               <  3:334021/149‑1 (MQ=255)                                                         gCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTg                                                                                            >  2:35557/1‑148 (MQ=255)                                                           aaCTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAAc                                                                                         >  1:107960/1‑149 (MQ=255)                                                             cTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGc                                                                                       >  5:158302/1‑149 (MQ=255)                                                             cTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGc                                                                                       >  1:277668/1‑149 (MQ=255)                                                                gACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTg                                                                                     <  6:228798/148‑1 (MQ=255)                                                                gACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCCCGGTGAACGCTGc                                                                                    >  4:263393/1‑149 (MQ=255)                                                                   ccGCAGTGGGCGGTGATTCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCa                                                                                 >  6:132781/1‑149 (MQ=255)                                                                   ccGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCa                                                                                 >  7:262188/1‑149 (MQ=255)                                                                   ccGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCa                                                                                 >  3:211753/1‑149 (MQ=255)                                                                    cGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCAt                                                                                <  5:107602/149‑1 (MQ=255)                                                                    cGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCAt                                                                                >  5:91614/1‑149 (MQ=255)                                                                     gCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATg                                                                               >  3:87045/1‑149 (MQ=255)                                                                           ggCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTg                                                                                     <  7:246/137‑1 (MQ=255)                                                                           ggCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTg                                                                                     >  8:246/1‑137 (MQ=255)                                                                           ggCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTg                                                                          <  6:134876/148‑1 (MQ=255)                                                                            gCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGgc                                                                        <  5:198398/149‑1 (MQ=255)                                                                            gCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGgc                                                                        >  2:57204/1‑149 (MQ=255)                                                                                  aTCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCAGTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGGCCATGCGTTGGCGCAAgc                                                                  <  2:277668/149‑1 (MQ=255)                                                                                  aTCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAgc                                                                  <  3:274984/149‑1 (MQ=255)                                                                                    ccccTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcg                                                                                                            >  7:184242‑M2/1‑63 (MQ=255)                                                                                    ccccTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcg                                                                                                            <  8:184242‑M2/105‑43 (MQ=255)                                                                                     cccTCGGCGTTCGTGCGCTCGGCCGAAGGGCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCTCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCa                                                               <  7:8898/149‑1 (MQ=255)                                                                                     cccTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcggtagtcacgttccaggcgctgacaggcggaaggggcctcgagcgg                                                               <  8:170165‑M2/149‑88 (MQ=255)                                                                                     cccTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcggtagtcacgttccaggcgctgacaggcggaaggggcctcgagcgg                                                               <  2:223525‑M2/149‑88 (MQ=255)                                                                                       cTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcggtagtcacgttccaggcgctgacaggcggaaggggcctcgagcggcg                                                             <  6:140380‑M2/149‑90 (MQ=255)                                                                                       cTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCAc                                                              >  4:254711/1‑148 (MQ=255)                                                                                             gTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTg                                                                          <  5:227901/130‑1 (MQ=255)                                                                                             gTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTg                                                                          >  6:227901/1‑130 (MQ=255)                                                                                                      cTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAgcgc                                                                <  1:81439/131‑1 (MQ=255)                                                                                                      cTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAgcgc                                                                >  2:81439/1‑131 (MQ=255)                                                                                                       tCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCa                                             >  1:176693/1‑149 (MQ=255)                                                                                                       tCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCa                                             >  7:173508/1‑149 (MQ=255)                                                                                                       tCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCa                                             >  7:82905/1‑149 (MQ=255)                                                                                                         ggCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACg                                           >  8:173685/1‑149 (MQ=255)                                                                                                          gCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACgg                                          <  1:10594/149‑1 (MQ=255)                                                                                                           ccGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACgg                                          >  5:377427/1‑148 (MQ=255)                                                                                                           ccGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGt                                         <  3:263393/149‑1 (MQ=255)                                                                                                            cGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTa                                        <  7:173685/149‑1 (MQ=255)                                                                                                               aGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACAt                                     <  5:184610/149‑1 (MQ=255)                                                                                                                ggCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACAtt                                    <  3:254711/149‑1 (MQ=255)                                                                                                                    cGTTGCTGGTGTACCCGGCCGGGCGCTCAGTcgccgaggggatcaccgcccactgcgggtccagttgcaggcggtagtcacgttccaggcgctgacaggcggaaggggcctcgagcggcgcgcgcacggcgatccaggcctgatttgtg                                >  7:170165‑M2/1‑31 (MQ=255)                                                                                                                     gTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGc                               <  6:158302/149‑1 (MQ=255)                                                                                                                        gCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCt                             <  5:40841/148‑1 (MQ=255)                                                                                                                         cTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTg                            <  7:268470/148‑1 (MQ=255)                                                                                                                            gtgtACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCACAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACa                        >  8:46853/1‑149 (MQ=255)                                                                                                                             tgtACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGc                               >  5:192729/1‑141 (MQ=255)                                                                                                                             tgtACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGc                               <  6:192729/141‑1 (MQ=255)                                                                                                                             tgtACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACAt                       <  8:173508/149‑1 (MQ=255)                                                                                                                               tACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACAtgt                     <  2:176693/149‑1 (MQ=255)                                                                                                                                 cccGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACAtgtg                    >  4:23708/1‑148 (MQ=255)                                                                                                                                  ccggccggGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAAc                                                          >  1:179888/1‑109 (MQ=255)                                                                                                                                  ccggccggGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAAc                                                          <  2:179888/109‑1 (MQ=255)                                                                                                                                   cggccggGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACATGTGTAc                 <  7:300480/149‑1 (MQ=255)                                                                                                                                        gggCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCTGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACATGTGTACCTgcg            <  5:132781/149‑1 (MQ=255)                                                                                                                                         ggCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGTGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACATGTGTACCTgcgc           >  7:363292/1‑149 (MQ=255)                                                                                                                                             cTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACATGTGTACCTGCGCGcc        >  8:254556/1‑148 (MQ=255)                                                                                                                                              tCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCAc                                            <  8:286819/111‑1 (MQ=255)                                                                                                                                              tCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACATGTGTACCTGCGCGCcca      >  8:142194/1‑149 (MQ=255)                                                                                                                                                aGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGc                               >  5:224741/1‑122 (MQ=255)                                                                                                                                                aGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGc                               <  6:224741/122‑1 (MQ=255)                                                                                                                                                  tCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACATTTGTACCTGCGCTCACACCAg  >  6:37925/1‑149 (MQ=255)                                                                                                                                                  tCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACATGTGTACCTGCGCGCCCACCAg  >  6:1794/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CGCGCGCCGCTCGAGGCCCCTTCCGCCTGTCAGCGCCTGGAACGTGACTACCGCCTGCAACTGGACCCGCAGTGGGCGGTGATCCCCTCGGCGTTCGTGCGCTCGGCCGAAGGCCCGTTGCTGGTGTACCCGGCCGGGCGCTCAGTCGCCGACCTGATCGCTGAAGGCCCTGCTGCACTGGAGCCGTTTCTCGACATCGCGGTGAACGCTGCCCATGCGTTGGCGCAAGCGCACGAACGCAATGTGCTGCACGGTACATTGCAGCCTGAACATGTGTACCTGCGCGCCCACCAG  >  NC_002947/5979515‑5979808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.