New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6067082	54 (0.870)	4 (0.070)	4/254	NT	7.2%	coding (1206/1308 nt)	phoR	two‑component system sensor histidine kinase
	?	NC_002947	= 6067129	52 (0.880)					coding (1253/1308 nt)	phoR	two‑component system sensor histidine kinase

ACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCA  >  NC_002947/6066938‑6067228                                                                                                                                                 |                                                                                                                                                    acacCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATgc                                                                                                                                                 >  5:109535/1‑149 (MQ=255)   acCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATgc‑gc                                                                                                                                              >  1:84469/1‑149 (MQ=255)          ggTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCggg                                                                                                                                       >  4:206487/1‑149 (MQ=255)          ggTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCggg                                                                                                                                       >  4:211534/1‑149 (MQ=255)          ggTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCggg                                                                                                                                       >  5:143440/1‑149 (MQ=255)           gTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCgggg                                                                                                                                      <  3:206487/149‑1 (MQ=255)           gTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCgggg                                                                                                                                      >  4:235353/1‑149 (MQ=255)           gTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCgggg                                                                                                                                      <  3:211534/149‑1 (MQ=255)           gTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCgggg                                                                                                                                      <  5:223293/149‑1 (MQ=255)                      gggggTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGaa                                                                                                                            <  3:235353/148‑1 (MQ=255)                          gTGGGCATCGATGCCCAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCGCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATcag                                                                                                                       <  4:21606/149‑1 (MQ=255)                               cATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAgtg                                                                                                                  >  3:360027/1‑149 (MQ=255)                                aTCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGccatgccccggtacactgctgatttccagcttgcc                                                                                                                  >  1:351070‑M1/1‑114 (MQ=255)                                       ccAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCggg                                                                                                           <  1:6772/148‑1 (MQ=255)                                        cAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCggg                                                                                                                                       <  2:220653/119‑1 (MQ=255)                                        cAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCggg                                                                                                                                       >  1:220653/1‑119 (MQ=255)                                        cAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCgggg                                                                                                          >  4:214348/1‑148 (MQ=255)                                        cAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCgggg                                                                                                          >  4:63815/1‑148 (MQ=255)                                         aaGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCa                                                                                                        >  7:95529/1‑149 (MQ=255)                                                  ccACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagcac                                                                                               >  4:135973‑M2/1‑143 (MQ=255)                                                  ccACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagca                                                                                                >  6:109535‑M2/1‑143 (MQ=255)                                                   cACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGccatgccccggtacactgctgatttccagcttgccccggtggcgcatcagcaca                                                                                               <  2:351070‑M1/149‑55 (MQ=255)                                                    aCGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCAt                                                                                                       <  4:71276/139‑1 (MQ=255)                                                    aCGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCAt                                                                                                       >  3:71276/1‑139 (MQ=255)                                                           aCCGAGCGGTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTAGCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATcagca                                                                                                                     <  4:340059/118‑1 (MQ=255)                                                           aCCGAGCGCGTCTACCGCGTAGACTGCAGCCGTGCATCGAATACCGGCGGTACCGGGCTTGGGCTCGCAATGGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCt                                                                                       <  7:304814/148‑1 (MQ=255)                                                             cGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGccatgccccggtacactgctgatttccagcttgccccgttggcgcatc                                                                                                     <  2:266680‑M1/133‑49 (MQ=255)                                                             cGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGccatgccccggtacactgctgatttccagcttgccccggtggcgcatc                                                                                                     >  1:266680‑M1/1‑85 (MQ=255)                                                              gAGCGCATCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCa                                                                                   >  1:27045/1‑149 (MQ=255)                                                               aGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGAACCTTTACCTGTCAc                                                                                  >  3:279284/1‑149 (MQ=255)                                                                gcgcTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCt                                                                                       <  1:196127/143‑1 (MQ=255)                                                                gcgcTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCt                                                                                       >  2:196127/1‑143 (MQ=255)                                                                  gcTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACttt                                                                               >  8:264087/1‑149 (MQ=255)                                                                      cTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTgcgc                                                                           >  1:282551/1‑149 (MQ=255)                                                                      cTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTgc                                                                             <  3:214348/147‑1 (MQ=255)                                                                       tACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTgcgc                                                                           >  7:38407/1‑148 (MQ=255)                                                                       tACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGcc                                                                          >  4:141514/1‑149 (MQ=255)                                                                         ccGCGTAGACTCCAGCGGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATCTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCa                                                                         <  6:112130/148‑1 (MQ=255)                                                                         ccGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAg                                                                        >  1:245631/1‑149 (MQ=255)                                                                              tAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACaa                                                                   >  5:10874/1‑149 (MQ=255)                                                                                gACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAAtt                                                                 <  2:84469/149‑1 (MQ=255)                                                                                  cTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCACAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTgg                                                               <  8:18747/149‑1 (MQ=255)                                                                                   tCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCTCCTTTACCTGTCCCATTGCGCCAGCACAATTGGc                                                              >  8:348542/1‑149 (MQ=255)                                                                                           tGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGaaa                                                      <  7:348542/149‑1 (MQ=255)                                                                                            gCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGCGGTCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGaa                                                       >  1:305527/1‑148 (MQ=255)                                                                                                 gAATCCCTGCGGTACCGGGCGGGGGCGCGCAATCGTCAAGCATTTTCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCtt                                                <  4:279284/149‑1 (MQ=255)                                                                                                 gAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCtt                                                <  7:330400/149‑1 (MQ=255)                                                                                                  aaTACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCtt                                                >  7:179863/1‑148 (MQ=255)                                                                                                   aTACCGGCGGTACCGGGCTGTGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGaa                                                       <  3:66103/140‑1 (MQ=255)                                                                                                   aTACCGGCGGTACCGGGCTGGGGCTCGCAATCTTGAAGCATGTGGTGTTGC‑GCCACGGGGGCAAGTTGGAAATGAGCAGTGTACCGGGGCATGGCAGCACCTTTAGCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGGTTga                                              <  2:322528/149‑1 (MQ=255)                                                                                                   aTACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGaa                                                       >  4:66103/1‑140 (MQ=255)                                                                                                    tACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCtt                                                >  2:361479/1‑146 (MQ=255)                                                                                                      ccGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTgaga                                            <  8:95529/148‑1 (MQ=255)                                                                                                      ccGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGAt                                           <  2:282551/149‑1 (MQ=255)                                                                                                       cggcggTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGAtt                                          >  1:367297/1‑149 (MQ=255)                                                                                                       cggcggTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGAtt                                          <  3:63815/149‑1 (MQ=255)                                                                                                         gcggTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGAtt                                          >  2:316412/1‑147 (MQ=255)                                                                                                                 gggCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTgcgg                                >  3:206115/1‑149 (MQ=255)                                                                                                                       gggCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGc                          <  4:360027/149‑1 (MQ=255)                                                                                                                                aTCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCgg                 <  8:38407/149‑1 (MQ=255)                                                                                                                                      aaGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGc           >  7:200854/1‑149 (MQ=255)                                                                                                                                           tgtgCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagcacatgcttgacgattgcgagccccagcccggtaccgccggtattcgatgcacggctggagtctacgcggtagaagcgctcggtcaggcgtg      <  2:351070‑M2/149‑96 (MQ=255)                                                                                                                                            gtgCTGccatgccccggtacactgctgatttccagcttgccccggtggcgcatcagcacatgcttgacgattgcgagccccagcccggtaccgccggtattcgatgcacggctggagtctacgcggtagaagcgctcggtcaggcgtgg      >  4:135973‑M1/1‑6 (MQ=255)                                                                                                                                             tgctgccatgccccggtacactgctgatttccagcttgccccggtggcgcatcagcacatgcttgacgattgcgagccccagcccggtaccgccggtattcgatgcacggctggagtctacgcggtagaagcgctcggtcaggcgtgg      >  6:109535‑M1/1‑5 (MQ=255)                                                                                                                                              gCTGATGC‑GCCACCGGGGCAAGCTGGAAAACAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGATAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGcc   >  1:139152/1‑149 (MQ=255)                                                                                                                                               cTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCa  <  2:367297/149‑1 (MQ=255)                                                                                                                                                 gATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagcacatgcttgacgattgcgagccccagcccggtaccgccggtattcgatgcacggctggagtctacgcggtagaagcgctcg                >  1:266680‑M2/1‑48 (MQ=255)                                                                                                                                                 gATGC‑GCCAACGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagcacatgcttgacgattgcgagccccagcccggtaccgccggtattcgatgcacggctggagtctacgcggtagaagcgctcg                <  2:266680‑M2/133‑86 (MQ=255)                                                                                                                                                 |                                                                                                                                                    ACACCTGTCGGTGCAGGACTCGGGGGTGGGCATCGATGCCAAGCATTTGCCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCA  >  NC_002947/6066938‑6067228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.