New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6067082	54 (0.870)	4 (0.070)	4/254	NT	7.2%	coding (1206/1308 nt)	phoR	two‑component system sensor histidine kinase
	?	NC_002947	= 6067129	52 (0.880)					coding (1253/1308 nt)	phoR	two‑component system sensor histidine kinase

CCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGG  >  NC_002947/6066987‑6067267                                                                                                                                                |                                                                                                                                           ccACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagcac                                                                                                                                      >  4:135973‑M2/1‑143 (MQ=255) ccACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagca                                                                                                                                       >  6:109535‑M2/1‑143 (MQ=255)          aCCGAGCGCGTCTACCGCGTAGACTGCAGCCGTGCATCGAATACCGGCGGTACCGGGCTTGGGCTCGCAATGGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCt                                                                                                                              <  7:304814/148‑1 (MQ=255)             gAGCGCATCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCa                                                                                                                          >  1:27045/1‑149 (MQ=255)              aGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGAACCTTTACCTGTCAc                                                                                                                         >  3:279284/1‑149 (MQ=255)               gcgcTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCt                                                                                                                              <  1:196127/143‑1 (MQ=255)               gcgcTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCt                                                                                                                              >  2:196127/1‑143 (MQ=255)                 gcTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACttt                                                                                                                      >  8:264087/1‑149 (MQ=255)                     cTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTgcgc                                                                                                                  >  1:282551/1‑149 (MQ=255)                     cTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTgc                                                                                                                    <  3:214348/147‑1 (MQ=255)                      tACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTgcgc                                                                                                                  >  7:38407/1‑148 (MQ=255)                      tACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGcc                                                                                                                 >  4:141514/1‑149 (MQ=255)                        ccGCGTAGACTCCAGCGGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATCTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCa                                                                                                                <  6:112130/148‑1 (MQ=255)                        ccGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAg                                                                                                               >  1:245631/1‑149 (MQ=255)                             tAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACaa                                                                                                          >  5:10874/1‑149 (MQ=255)                               gACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAAtt                                                                                                        <  2:84469/149‑1 (MQ=255)                                 cTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCACAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTgg                                                                                                      <  8:18747/149‑1 (MQ=255)                                  tCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCTCCTTTACCTGTCCCATTGCGCCAGCACAATTGGc                                                                                                     >  8:348542/1‑149 (MQ=255)                                          tGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGaaa                                                                                             <  7:348542/149‑1 (MQ=255)                                           gCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGCGGTCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGaa                                                                                              >  1:305527/1‑148 (MQ=255)                                                gAATCCCTGCGGTACCGGGCGGGGGCGCGCAATCGTCAAGCATTTTCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCtt                                                                                       <  4:279284/149‑1 (MQ=255)                                                gAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCtt                                                                                       <  7:330400/149‑1 (MQ=255)                                                 aaTACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCtt                                                                                       >  7:179863/1‑148 (MQ=255)                                                  aTACCGGCGGTACCGGGCTGTGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGaa                                                                                              <  3:66103/140‑1 (MQ=255)                                                  aTACCGGCGGTACCGGGCTGGGGCTCGCAATCTTGAAGCATGTGGTGTTGC‑GCCACGGGGGCAAGTTGGAAATGAGCAGTGTACCGGGGCATGGCAGCACCTTTAGCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGGTTga                                                                                     <  2:322528/149‑1 (MQ=255)                                                  aTACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGaa                                                                                              >  4:66103/1‑140 (MQ=255)                                                   tACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCtt                                                                                       >  2:361479/1‑146 (MQ=255)                                                     ccGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTgaga                                                                                   <  8:95529/148‑1 (MQ=255)                                                     ccGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGAt                                                                                  <  2:282551/149‑1 (MQ=255)                                                      cggcggTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGAtt                                                                                 <  3:63815/149‑1 (MQ=255)                                                      cggcggTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGAtt                                                                                 >  1:367297/1‑149 (MQ=255)                                                        gcggTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGAtt                                                                                 >  2:316412/1‑147 (MQ=255)                                                                gggCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTgcgg                                                                       >  3:206115/1‑149 (MQ=255)                                                                      gggCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGc                                                                 <  4:360027/149‑1 (MQ=255)                                                                               aTCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCgg                                                        <  8:38407/149‑1 (MQ=255)                                                                                     aaGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGc                                                  >  7:200854/1‑149 (MQ=255)                                                                                          tgtgCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagcacatgcttgacgattgcgagccccagcccggtaccgccggtattcgatgcacggctggagtctacgcggtagaagcgctcggtcaggcgtg                                             <  2:351070‑M2/149‑96 (MQ=255)                                                                                             gCTGATGC‑GCCACCGGGGCAAGCTGGAAAACAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGATAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGcc                                          >  1:139152/1‑149 (MQ=255)                                                                                              cTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCa                                         <  2:367297/149‑1 (MQ=255)                                                                                                gATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagcacatgcttgacgattgcgagccccagcccggtaccgccggtattcgatgcacggctggagtctacgcggtagaagcgctcg                                                       >  1:266680‑M2/1‑48 (MQ=255)                                                                                                gATGC‑GCCAACGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagcacatgcttgacgattgcgagccccagcccggtaccgccggtattcgatgcacggctggagtctacgcggtagaagcgctcg                                                       <  2:266680‑M2/133‑86 (MQ=255)                                                                                                 aTGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCGGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTg                                      >  3:78935/1‑149 (MQ=255)                                                                                                  tGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTgg                                     <  7:264087/149‑1 (MQ=255)                                                                                                      gcCACCGGGGCAAGCTCGAAATCAGCAGTGTACCGGGGCATGTCAGCACCTTTACCTGTCACTTTGAGCCAGCACAATTGGCCAACGAAAAGCCATGAGATTGAGGCTGCGGCGCAGACCTTCGCGGGCATGCCGGCTGCCACTGGGcc                                  >  5:42231/1‑149 (MQ=255)                                                                                                       ccACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGccc                                 <  6:143440/149‑1 (MQ=255)                                                                                                       ccACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGccc                                 <  6:10874/149‑1 (MQ=255)                                                                                                             gggCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATg                           <  8:179863/149‑1 (MQ=255)                                                                                                              ggCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGcagcacatgcttgacgattgcgagccccagcccggtaccgccggtattcgatgcacggctggagtctacgcggtagaagcgctcggtcaggcgtggcaaatgcttggcatcgat                          >  1:351070‑M2/1‑35 (MQ=255)                                                                                                                 aaGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTc                       >  3:100043/1‑149 (MQ=255)                                                                                                                 aaGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTc                       >  6:134249/1‑149 (MQ=255)                                                                                                                     tGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCt                   >  2:373871/1‑149 (MQ=255)                                                                                                                       gAAATCAGCAGTGTACCGGGGCATGGCGGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTg                  <  4:78935/148‑1 (MQ=255)                                                                                                                             agcagTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTg           >  2:38761/1‑149 (MQ=255)                                                                                                                             agcagTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTg           >  3:186822/1‑149 (MQ=255)                                                                                                                              gcagTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGc          <  1:373871/149‑1 (MQ=255)                                                                                                                                  tgtACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCtttt      <  7:307264/149‑1 (MQ=255)                                                                                                                                   gtACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTa     >  1:261100/1‑149 (MQ=255)                                                                                                                                      ccGGGGCATGGCAGCACCTTTACCAGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATAGCGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCCCTGGGCCCGCAATGAGTCCGCTGCCCATTGCTTTTACgg  >  8:180733/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                           CCACGCCTGACCGAGCGCTTCTACCGCGTAGACTCCAGCCGTGCATCGAATACCGGCGGTACCGGGCTGGGGCTCGCAATCGTCAAGCATGTGCTGATGC‑GCCACCGGGGCAAGCTGGAAATCAGCAGTGTACCGGGGCATGGCAGCACCTTTACCTGTCACTTTGCGCCAGCACAATTGGCCAACGAAAAGGCTTGAGATTGAGGCTGCGGCGCAGCCCTTCGCGGGCATGCCGGCTGCCACTGGGCCCGCAATGAGTCCGCTGCCCTTTGCTTTTACGG  >  NC_002947/6066987‑6067267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.