New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	319049 =	61 (0.980)	6 (0.100)	5/250	NT	10.2%	coding (693/1815 nt)	PP_0264	sensor histidine kinase
	?	NC_002947	319095 =	48 (0.820)					coding (647/1815 nt)	PP_0264	sensor histidine kinase

CCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGG  >  NC_002947/318948‑319242                                                                                                                                                      |                                                                                                                                                     ccAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCGCGGCGTCGGTCAGGGTGCGGGTAGCACGGAAGCGCCAGTc                                                                                                                                                     <  1:12108/149‑1 (MQ=255)  cAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCg                                                                                                                                                    >  8:33091/1‑149 (MQ=255)   aGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCgg                                                                                                                                                   <  5:378397/149‑1 (MQ=255)   aGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCgg                                                                                                                                                   >  2:101643/1‑149 (MQ=255)    gTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGGCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCggg                                                                                                                                                  <  2:246610/149‑1 (MQ=255)    agtcgatctcgaccacaccgaaaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCgg                                                                                                                                                   >  1:387878‑M1/100‑149 (MQ=255)     tttCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGGTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGc                                                                                                                                                 <  2:127834/149‑1 (MQ=255)      ttCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCggg                                                                                                                                                  >  1:341662/1‑147 (MQ=255)           ctcgaccacaccgaaaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCgg                                                                                                                                                   <  8:290275‑M1/50‑1 (MQ=255)           ctcgaccacaccgaaaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCgg                                                                                                                                                   >  7:290275‑M1/93‑142 (MQ=255)            gATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGaa                                                                                                                                           <  1:278223/148‑1 (MQ=255)                tCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAg                                                                                                                                      <  1:268974/149‑1 (MQ=255)                  gcggggcgggGGGATCCAGGGCGGCGGGGTGAGAACCAGCGGCTGTGGGGCCGGGGTCGGATAGGGCTGGATGGCGTTG‑ATGGCCTGGAGGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAg                                                                                                                                      <  1:305219/148‑1 (MQ=255)                   cgGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGAt                                                                                                                                   <  3:85725/149‑1 (MQ=255)                         aaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGt                                                                                                                                                      >  6:232887‑M1/79‑125 (MQ=255)                         aaccctgtggggccgtacgcccgagcagctgttgctgaccgatcacaatggcgtggtcatcctgacttcgcggcccgaCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGt                                                                                                                                                      <  5:232887‑M1/47‑1 (MQ=255)                              gATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCAt                                                                                                                       >  6:360417/1‑149 (MQ=255)                               aTCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCAtt                                                                                                                      >  1:266736/1‑149 (MQ=255)                                tCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATtg                                                                                                                     >  2:169064/1‑149 (MQ=255)                                tCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATtg                                                                                                                     >  3:304293/1‑149 (MQ=255)                                  cAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGTAAGGCCTGG‑GGATCGGCTACGTAAAGCGGCCGGGTAGCACGGAACCGCAAGACGGGCCGCGAAGTCAGAAGTACCACG‑CCATtgt                                                                                                                    >  1:310594/1‑149 (MQ=255)                                  cAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATtgt                                                                                                                    >  3:322725/1‑148 (MQ=255)                                          cGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTc                                                                                                            <  4:47372/148‑1 (MQ=255)                                              ttGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCa                                                                                                        <  8:79520/148‑1 (MQ=255)                                              ttGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTAGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCa                                                                                                        >  7:79520/1‑148 (MQ=255)                                                 agaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAg                                                                                                          <  1:339436/143‑1 (MQ=255)                                                 agaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAg                                                                                                          >  2:339436/1‑143 (MQ=255)                                                 agaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACa                                                                                                     <  5:351832/148‑1 (MQ=255)                                                 agaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACa                                                                                                     <  4:322725/148‑1 (MQ=255)                                                  gaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAgc                                                                                                   >  6:159654/1‑149 (MQ=255)                                                  gaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAgc                                                                                                   >  5:132260/1‑149 (MQ=255)                                                     ccAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAgctgc                                                                                                >  3:70164/1‑149 (MQ=255)                                                     ccAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAgctgc                                                                                                <  2:266736/149‑1 (MQ=255)                                                     ccAGCGGCTCTGGGGCCAGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGTCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGCATGACCACG‑CCATTGTGATCGGTAAGAAACAgctgc                                                                                                >  6:268349/1‑149 (MQ=255)                                                      cAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAgctgct                                                                                               >  6:324699/1‑149 (MQ=255)                                                      cAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGACAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAgctgct                                                                                               >  8:106887/1‑149 (MQ=255)                                                                 gggCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACgg                                                                                    >  1:133925/1‑149 (MQ=255)                                                                   gCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGcc                                                                                  >  3:16061/1‑149 (MQ=255)                                                                    ccTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCCCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGccc                                                                                 >  2:360803/1‑149 (MQ=255)                                                                     cTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGccc                                                                                 >  3:42863/1‑148 (MQ=255)                                                                                 gggCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCg                                                                     <  1:101643/149‑1 (MQ=255)                                                                                    cTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGgtgt                                                                 <  2:133925/149‑1 (MQ=255)                                                                                           gCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGTAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCga                                                           <  6:208776/148‑1 (MQ=255)                                                                                           gCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGCCCACG‑CCATTGTGATCGGTCAGCACCAGCTGCTCGGGCGTACGGCCCCACAGGGTGTCGGTGTGGTc                                                             >  6:126161/1‑146 (MQ=255)                                                                                              atg‑atgGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCTAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTc                                                             >  2:189568/1‑143 (MQ=255)                                                                                              atg‑atgGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATc                                                       <  4:304293/149‑1 (MQ=255)                                                                                               tg‑atgGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCg                                                      <  2:357177/149‑1 (MQ=255)                                                                                                    ggCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACtt                                                  >  4:91736/1‑149 (MQ=255)                                                                                                    ccgactggcgcttccgtgctacccgcacgctgaccgacgccgagcgccagTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCgag                                                          >  7:290275‑M2/51‑142 (MQ=255)                                                                                                    ccgactggcgcttccgtgctacccgcacgctgaccgacgccgagcgccagTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCgag                                                          <  8:290275‑M2/92‑1 (MQ=255)                                                                                                    ccgactggcgcttccgtgctacccgcacgctgaccgacgccgagcgccagTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACt                                                   >  1:387878‑M2/51‑149 (MQ=255)                                                                                                     gCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACttt                                                 <  4:42863/149‑1 (MQ=255)                                                                                                      ccTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACttt                                                 >  8:316750/1‑148 (MQ=255)                                                                                                       actggcgcttccgtgctacccgcacgctgaccgacgccgagcgccagTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGtt                                                                        <  5:232887‑M2/78‑1 (MQ=255)                                                                                                       actggcgcttccgtgctacccgcacgctgaccgacgccgagcgccagTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGtt                                                                        >  6:232887‑M2/48‑125 (MQ=255)                                                                                                        TGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGgt                                                                   >  8:126722‑M1/1‑128 (MQ=255)                                                                                                        TGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGgt                                                                   <  7:126722‑M1/128‑1 (MQ=255)                                                                                                        TGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGac                                              <  4:333813‑M1/149‑1 (MQ=255)                                                                                                          G‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGa                                               >  5:375200‑M1/1‑146 (MQ=255)                                                                                                          G‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGa                                               <  6:375200‑M1/146‑1 (MQ=255)                                                                                                            CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGaccac                                           >  2:310594‑M1/1‑149 (MQ=255)                                                                                                              CTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGaccac                                           <  7:6225‑M1/147‑1 (MQ=255)                                                                                                              CTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGAccacca                                         >  7:316750‑M1/1‑149 (MQ=255)                                                                                                                       ggTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCcga                                >  6:293353/1‑149 (MQ=255)                                                                                                                        gTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCcgac                               <  5:159654/149‑1 (MQ=255)                                                                                                                         tCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGAGCACCAGCACGCcgac                               >  7:44896/1‑148 (MQ=255)                                                                                                                           aGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGAt                            <  1:169064/149‑1 (MQ=255)                                                                                                                            gCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATc                           >  7:121146/1‑149 (MQ=255)                                                                                                                                gCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCgg                                                                                            >  3:124731/1‑80 (MQ=255)                                                                                                                                gCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCgg                                                                                            <  4:124731/80‑1 (MQ=255)                                                                                                                                  gggTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTcg                     <  4:16061/149‑1 (MQ=255)                                                                                                                                   ggTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTcgc                    <  7:33091/149‑1 (MQ=255)                                                                                                                                    accgacgccgagcgccagTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTcgc                    <  2:387878‑M2/130‑1 (MQ=255)                                                                                                                                         aCGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTcgc              >  2:238172/1‑149 (MQ=255)                                                                                                                                          cGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACCGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTcgcg             >  6:296383/1‑149 (MQ=255)                                                                                                                                           ggAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTcgcg             >  6:247830/1‑148 (MQ=255)                                                                                                                                             aaGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCGCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCAc          <  5:324699/149‑1 (MQ=255)                                                                                                                                             aaGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCAc          >  3:49822/1‑149 (MQ=255)                                                                                                                                              agcgccagTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTTGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACg         <  7:106887‑M2/141‑1 (MQ=255)                                                                                                                                                 gcaagTCGGGCCGCCAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCCCCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGcc      >  6:32313‑M2/6‑149 (MQ=255)                                                                                                                                                  ccagTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCcg     >  7:343130‑M2/5‑149 (MQ=255)                                                                                                                                                     gTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCgg  <  3:91736‑M2/148‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATG‑ATGGCCTGG‑CGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACG‑CCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCAGCACGCCGACGATCCGCTCGCGGTCGCGCACGGCCGCGG  >  NC_002947/318948‑319242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.