New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 491380	57 (0.920)	4 (0.070)	4/258	NT	6.6%	coding (1041/2823 nt)	lptD	LPS‑assembly protein LptD
	?	NC_002947	= 491403	58 (0.960)					coding (1018/2823 nt)	lptD	LPS‑assembly protein LptD

TTTGCGGTCGTCGTTCTTGTCGTTCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCGGGAAATCCTTGA  >  NC_002947/491257‑491540                                                                                                                                                   |                                                                                                                                            tttGCGGTCGTCGTTCTTGTCGTTCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGgt                                                                                                                                           <  6:85189‑M2/149‑3 (MQ=255)   tGCGGTCGTCGTTCTTGTCGTTCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGgtt                                                                                                                                          >  8:191039‑M2/1‑145 (MQ=255)      ggTCGTCGTTCTTGTCGTTCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAag                                                                                                                                      <  7:219079/149‑1 (MQ=255)          gtcgtTCTTGTCGTTCAAGTATGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAagtag                                                                                                                                   <  7:337456/148‑1 (MQ=255)           tcgtTCTTGTCGTTCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAgtagta                                                                                                                                 <  4:173179/149‑1 (MQ=255)                   gTCGTTCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACCTGGCGCCTAACTACGACGCCACgttgtacccgcgttacatg                                                                                                                          >  6:332953‑M2/1‑129 (MQ=255)                    tCGTTCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGAc                                                                                                                        >  6:209465/1‑149 (MQ=255)                      gTTCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTACCGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGAc                                                                                                                        >  7:144278/1‑147 (MQ=255)                      gTTCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGAc                                                                                                                        >  4:368231/1‑147 (MQ=255)                       ttCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGaa                                                                                                                                       >  1:24165/1‑131 (MQ=255)                       ttCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGaa                                                                                                                                       <  2:24165/131‑1 (MQ=255)                       ttCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAg                                                                                                                     >  1:144269/1‑149 (MQ=255)                                 cgccgcCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCg                                                                                                           <  4:759/149‑1 (MQ=255)                                    cgccgAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGgt‑‑g                                                                                                      <  5:68605/149‑1 (MQ=255)                                          aCTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCgctg                                                                                                >  8:344182/1‑149 (MQ=255)                                            tGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGgtt                                                                                                                                          >  4:83974‑M2/1‑104 (MQ=255)                                            tGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGgtt                                                                                                                                          <  3:83974‑M2/107‑4 (MQ=255)                                               ccTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTTCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGt                                                                                           <  2:24802/149‑1 (MQ=255)                                                cTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTg                                                                                          <  5:85189/149‑1 (MQ=255)                                                 ttCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGc                                                                                         >  8:315014/1‑149 (MQ=255)                                                          aGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAgg                                                                                <  4:89503/149‑1 (MQ=255)                                                            gtgtCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGggc                                                                              <  7:323793/149‑1 (MQ=255)                                                            gtgtCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGggc                                                                              >  2:352230/1‑149 (MQ=255)                                                               tCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGggcggc                                                                           >  2:318636/1‑149 (MQ=255)                                                               tCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGggcgg                                                                            <  5:160801/148‑1 (MQ=255)                                                                 aGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAg                                                                         >  6:138641/1‑149 (MQ=255)                                                                 aGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAg                                                                         >  2:88128/1‑149 (MQ=255)                                                                   gTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAgg                                                                        >  3:111338/1‑148 (MQ=255)                                                                       cGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAAcc                                                                   >  3:39633/1‑149 (MQ=255)                                                                       cGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAAcc                                                                   <  2:144269/149‑1 (MQ=255)                                                                       cGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTCAACGAGGGCGCCAGGAAAcc                                                                   >  8:249643/1‑149 (MQ=255)                                                                       cGGAACTCGACTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACTGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAAc                                                                    <  8:130556/148‑1 (MQ=255)                                                                               gCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGc                                                           >  6:258729/1‑149 (MQ=255)                                                                                 cTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGa                                                         >  1:157194/1‑149 (MQ=255)                                                                                  ttCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAg                                                                         <  1:165824/132‑1 (MQ=255)                                                                                  ttCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAg                                                                         >  2:165824/1‑132 (MQ=255)                                                                                  ttCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAg                                                                         >  6:219791/1‑132 (MQ=255)                                                                                  ttCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAg                                                                         <  5:219791/132‑1 (MQ=255)                                                                                      aTCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGgtc                                                    <  8:44496/149‑1 (MQ=255)                                                                                      aTCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGgtc                                                    <  2:283112/149‑1 (MQ=255)                                                                                       tCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGaa                                                                                                                                       >  1:17578/1‑67 (MQ=255)                                                                                       tCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGaa                                                                                                                                       <  2:17578/67‑1 (MQ=255)                                                                                       tCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGgtcg                                                   >  4:291334/1‑149 (MQ=255)                                                                                       tCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGgtcg                                                   >  6:23574/1‑149 (MQ=255)                                                                                       tCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTCGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGgtcg                                                   >  5:353441/1‑149 (MQ=255)                                                                                         agcagGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGgtcgt                                                  <  4:39633/148‑1 (MQ=255)                                                                                         agcagGCCGCGCGTGGCCATGGAACGCGGGCACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGCACGGCGTGACCAGCATGAAGCCGGT‑‑GGCGCTGCTGGTGCTGAACGAGCGCGGCAGGAAACCGGACTGGCGACGgtcgt                                                  <  4:111338/148‑1 (MQ=255)                                                                                           cagGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCaa                                               <  1:88128/149‑1 (MQ=255)                                                                                                cgcgCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCggg                                          <  1:318636/149‑1 (MQ=255)                                                                                                cgcgCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCggg                                          <  7:344182/149‑1 (MQ=255)                                                                                                  cgcTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGaa                                        <  5:209465/149‑1 (MQ=255)                                                                                                        gCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGAt                                  >  4:88924/1‑149 (MQ=255)                                                                                                        gCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGAt                                  <  7:315014/149‑1 (MQ=255)                                                                                                               aaCGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGgt                           >  2:55428/1‑149 (MQ=255)                                                                                                                aCGCGGGTACTCCGTGTCGTCGTAGTTATGCGGCAGGGTGAAGTAGTACGGCGGGACCAGCTTGACGCCGCT‑‑GTGGATGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGGGACGGTCGTCAATCGGGAAGTAGATGTACGgtg                          <  4:198596/149‑1 (MQ=255)                                                                                                                aCGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGgtg                          <  5:23574/149‑1 (MQ=255)                                                                                                                   cgGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGtat                       <  5:138641/149‑1 (MQ=255)                                                                                                                      gTACAACGTGGCGTCGTAGTTAGGCGCCAGgttgtacccgcgttacatggccaagcgcggcctgctgatggaaggcgagttccgctacctgacaccttccagcgaaggccagttcggcggcgcctacttgaacgacaagaacgacgacc                      <  5:18641‑M2/149‑120 (MQ=255)                                                                                                                      gTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAg                     >  8:172617/1‑148 (MQ=255)                                                                                                                        aCAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGTGAGGCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAg                     >  1:310940/1‑148 (MQ=255)                                                                                                                          aaCGTGGCGTCGTAGTTAGGCGCCAGgttgtacccgcgttacatggccaagcgcggcctgctgatggaaggcgagttccgctacctgacacctt                                                                         >  6:96829‑M2/1‑26 (MQ=255)                                                                                                                          aaCGTGGCGTCGTAGTTAGGCGCCAGgttgtacccgcgttacatggccaagcgcggcctgctgatggaaggcgagttccgctacctgacacctt                                                                         <  5:96829‑M2/94‑69 (MQ=255)                                                                                                                             gTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGgtc                                                    >  2:274160/1‑110 (MQ=255)                                                                                                                             gTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGgtc                                                    <  1:274160/110‑1 (MQ=255)                                                                                                                                     gtAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCGGGAAATCCt     <  3:291334/149‑1 (MQ=255)                                                                                                                                      tAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCggg            >  3:129136/1‑141 (MQ=255)                                                                                                                                      tAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCggg            <  4:129136/141‑1 (MQ=255)                                                                                                                                      tAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCGGGAAATCCtt    <  3:88924/149‑1 (MQ=255)                                                                                                                                      tAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCGGGAAATCCtt    <  5:30030/149‑1 (MQ=255)                                                                                                                                        gTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCGGGAAATCCTTg   <  5:258729/148‑1 (MQ=255)                                                                                                                                        gTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCGGGAAATCCTTGa  <  3:368231/149‑1 (MQ=255)                                                                                                                                               gcCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCGGGAAATCCTTg   >  1:43530/1‑141 (MQ=255)                                                                                                                                               gcCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCGGGAAATCCTTg   <  2:43530/141‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                            TTTGCGGTCGTCGTTCTTGTCGTTCAAGTAGGCGCCGCCGAACTGGCCTTCGCTGGAAGGTGTCAGGTAGCGGAACTCGCCTTCCATCAGCAGGCCGCGCTTGGCCATGTAACGCGGGTACAACGTGGCGTCGTAGTTAGGCGCCAGGTTGAAGTAGTACGGCGTGACCAGCATGAAGCCGGT‑‑GTCGCTGCTGGTGCTGAACGAGGGCGGCAGGAAACCGGACTGGCGACGGTCGTCAATCGGGAAGTAGATGTACGGTGTATAGAACACCGGGAAATCCTTGA  >  NC_002947/491257‑491540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.