New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1210993 =	76 (1.230)	4 (0.070)	4/258	NT	5.0%	coding (1474/1620 nt)	PP_1060	glutamate synthase large subunit
	?	NC_002947	1211074 =	77 (1.280)					coding (1393/1620 nt)	PP_1060	glutamate synthase large subunit

CTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACTGGATGCAGCCGATGGC  >  NC_002947/1210928‑1211221                                                                                                                                                   |                                                                                                                                                    cTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCCGCATTTCTGCCAAgg                                                                                                                                                   >  2:259882/1‑149 (MQ=255) cTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCaa                                                                                                                                                     >  4:4933/1‑147 (MQ=255) cTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCaa                                                                                                                                                     <  3:4933/147‑1 (MQ=255)  gcgctggtggtgcccgacaaagcccagcgggtgctgaacttccatcacaacacgttgcgtgcctTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGc                                                                                                                                                  >  8:198800‑M1/65‑149 (MQ=255)    gCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGc                                                                                                                                                  <  4:85287/147‑1 (MQ=255)    gCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCAc                                                                                                                                                <  5:290278/149‑1 (MQ=255)    gCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGACCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCaa                                                                                                                                                >  7:346644/1‑148 (MQ=255)    cccGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGTCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGc                                                                                                                                                  <  8:346644/146‑1 (MQ=255)     ccGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACg                                                                                                                                               >  6:243453/1‑149 (MQ=255)         tCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAAc                                                                                                                                           <  1:105409/149‑1 (MQ=255)            gcagcTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACgtg                                                                                                                                        <  5:294721/149‑1 (MQ=255)            gcagcTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACgtg                                                                                                                                        >  5:314883/1‑149 (MQ=255)             cagcTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACgtgt                                                                                                                                       >  4:264776/1‑149 (MQ=255)             cagcTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACgtgt                                                                                                                                       >  6:221959/1‑149 (MQ=255)              agcTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGtgtt                                                                                                                                      <  6:301855/149‑1 (MQ=255)              agcTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGtgtt                                                                                                                                      <  4:14642/149‑1 (MQ=255)               gcTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGtgttg                                                                                                                                     <  2:116596/149‑1 (MQ=255)               gcTCACCTGGCTTCAAGAACAAATGCATCTGCGAGAAGAGGTTGATTTCGGTGGACGAAATGCGCCGCACCAGGTGCTTGGCCTCGAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCTACGtgttg                                                                                                                                     <  5:289041/149‑1 (MQ=255)                   aCCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGAt                                                                                                                                 <  5:157283/149‑1 (MQ=255)                          ttCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGAt                                                                                                                                 >  4:249083/1‑142 (MQ=255)                          ttCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGAt                                                                                                                                 <  3:249083/142‑1 (MQ=255)                          ttCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGtt                                                                                                                          >  6:167492/1‑149 (MQ=255)                            cAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGtt                                                                                                                          <  4:353561/147‑1 (MQ=255)                            cAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGtt                                                                                                                          <  1:81759/147‑1 (MQ=255)                             aaGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCa                                                                                                                        <  2:180943/148‑1 (MQ=255)                             aaGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGACAAGGCACGCAACGTGTTGTGATGGAAGTTCAg                                                                                                                       >  4:300416/1‑149 (MQ=255)                              aGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAg                                                                                                                       >  1:364478/1‑148 (MQ=255)                               gAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCCCCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGAGGTGTGATGGAAGTTCAGCa                                                                                                                     >  4:362763/1‑149 (MQ=255)                                  cacaTGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCAc                                                                                                                    >  8:274271/1‑147 (MQ=255)                                   acaTGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCg                                                                                                                 >  2:71516/1‑149 (MQ=255)                                   acaTGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCg                                                                                                                 >  2:253373/1‑149 (MQ=255)                                    caTGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGc                                                                                                                <  8:104930/149‑1 (MQ=255)                                     aTGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCt                                                                                                               >  5:148864/1‑149 (MQ=255)                                         aTCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGc                                                                                                           >  8:126218/1‑149 (MQ=255)                                              cGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCATCACCCGCTGGGCttt                                                                                                        <  6:314883/147‑1 (MQ=255)                                               gagaACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTc                                                                                                     <  5:221959/149‑1 (MQ=255)                                                agaACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCg                                                                                                    <  6:148864/149‑1 (MQ=255)                                                 gaACAGCTTGTTTTAGGTGGCCGAATTGCGCCGCACCTGGTGCTTGGCATCCAGTTGTGCCGTATTCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCgg                                                                                                   <  5:303505/149‑1 (MQ=255)                                                 gaACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCgg                                                                                                   <  5:243453/149‑1 (MQ=255)                                                           aTTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTg                                                                                                       >  7:47549/1‑135 (MQ=255)                                                           aTTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTg                                                                                                       <  8:47549/135‑1 (MQ=255)                                                              gccttggcagaaatgctggcggcggcaggcctggagcatccggcacaactggaggccaagcacctggtgcggcgcatttcggccaAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAgcgc                                                                                      >  8:198800‑M2/86‑149 (MQ=255)                                                                   ggcagaaatgctggcggcggcaggcctggagcatccggcacaactggaggccaagcacctggtgcggcgcatttcggccaAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCt                                                                                 >  6:94327‑M2/81‑149 (MQ=255)                                                                    gcagaaatgctggcggcggcaggcctggagcatccggcacaactggaggccaagcacctggtgcggcgcatttcggccaAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTg                                                                                >  6:316136‑M2/80‑149 (MQ=255)                                                                    GCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTg                                                                                >  7:126218‑M1/1‑149 (MQ=255)                                                                      cGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCggg                                                                                                  <  1:114095/129‑1 (MQ=255)                                                                      cGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCggg                                                                                                  >  2:114095/1‑129 (MQ=255)                                                                      cGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGgc                                                                              >  7:118275/1‑149 (MQ=255)                                                                             cgccgcACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCg                                                                        <  1:71516/148‑1 (MQ=255)                                                                              gccgcACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGa                                                                      >  4:297683/1‑149 (MQ=255)                                                                                     cAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCg                                                               >  6:377446/1‑149 (MQ=255)                                                                                     cAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCg                                                               <  6:307977/149‑1 (MQ=255)                                                                                     cAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGAGTAAAAGGAATTTCAACAGCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCCCTGGCGCAGCGGAACTTGCg                                                               >  1:320644/1‑149 (MQ=255)                                                                                      aGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAGCGTCTTCAGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACAAGCGCGCGCTGGCGCAGCGGATCTTGAGt                                                              >  4:23948/1‑149 (MQ=255)                                                                                      aGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGt                                                              <  7:274271/149‑1 (MQ=255)                                                                                      aGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGt                                                              >  2:385302/1‑149 (MQ=255)                                                                                      aGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGt                                                              >  5:51383/1‑149 (MQ=255)                                                                                       ggTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGAGGATCTTGCGTg                                                             >  1:329566/1‑149 (MQ=255)                                                                                               gagcatccggcacaactggaggccaagcacctggtgcggcgcatttcggccaAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGc                                                      <  5:316136‑M2/96‑1 (MQ=255)                                                                                               gCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGcc                                                     >  1:92413/1‑149 (MQ=255)                                                                                               gCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGcc                                                     >  4:193858/1‑149 (MQ=255)                                                                                                 cTCCAGTTGTGCCGGATGCTCCAGGCCTGCGGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCgg                                                   >  1:34251/1‑149 (MQ=255)                                                                                                 cTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCgg                                                   <  2:34251/149‑1 (MQ=255)                                                                                                 cTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCgg                                                   >  1:118648/1‑149 (MQ=255)                                                                                                  tCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGt                                                  >  5:385309/1‑149 (MQ=255)                                                                                                    cAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTc                                                 <  1:253373/148‑1 (MQ=255)                                                                                                            ccGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATttg                                        >  1:380229/1‑149 (MQ=255)                                                                                                               gATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATttgttg                                     <  5:377446/149‑1 (MQ=255)                                                                                                               gATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATttgttg                                     >  2:219461/1‑149 (MQ=255)                                                                                                               gATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATttgttg                                     <  5:167492/149‑1 (MQ=255)                                                                                                               gATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATttgttg                                     >  3:203709/1‑149 (MQ=255)                                                                                                               gATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATttgttg                                     >  6:361725/1‑149 (MQ=255)                                                                                                                  gCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGGCGGGCATTTGTTGgtg                                  >  7:284790/1‑149 (MQ=255)                                                                                                                     ccAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTgg                               >  3:259261/1‑149 (MQ=255)                                                                                                                      cAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTgg                               <  2:118648/148‑1 (MQ=255)                                                                                                                      cAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTgg                               >  5:295349/1‑148 (MQ=255)                                                                                                                      cAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGc                              <  1:385302/149‑1 (MQ=255)                                                                                                                      cAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGc                              <  2:320644/149‑1 (MQ=255)                                                                                                                       aGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCa                             <  4:203709/149‑1 (MQ=255)                                                                                                                         gCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGc                           <  2:92413/149‑1 (MQ=255)                                                                                                                           cTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCtt                         >  5:163816/1‑149 (MQ=255)                                                                                                                              ccgccgccAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCttt                        <  8:118275/147‑1 (MQ=255)                                                                                                                              ccgccgccAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCttt                        <  6:295349/147‑1 (MQ=255)                                                                                                                               cgccgccAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCg                     <  6:51383/149‑1 (MQ=255)                                                                                                                                  cgccAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACt                  <  3:297683/149‑1 (MQ=255)                                                                                                                                   gccAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGgt                                   <  3:373177/131‑1 (MQ=255)                                                                                                                                   gccAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGgt                                   >  4:373177/1‑131 (MQ=255)                                                                                                                                     cAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACTGGa               >  7:39488/1‑149 (MQ=255)                                                                                                                                     cAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTGGGCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGGGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACTGGa               <  2:364478/149‑1 (MQ=255)                                                                                                                                           ttCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACTGGATGCAGc         >  8:176799/1‑149 (MQ=255)                                                                                                                                               gccaAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACTg                 >  3:259511‑M2/5‑137 (MQ=255)                                                                                                                                               gccaAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACTg                 <  4:259511‑M2/133‑1 (MQ=255)                                                                                                                                                ccaAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACTGGATGCAGCCGa      <  8:284790‑M2/144‑1 (MQ=255)                                                                                                                                                ccaAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACTGGATGCAGCCGAt     <  1:219461‑M2/145‑1 (MQ=255)                                                                                                                                                  aAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACTGGATGCAGCCGATGGc  >  5:2935‑M2/2‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CTCGCCGGTCAGCAGCTCACCTGGCTTCAAGAACACATGCATCTGCGAGAACAGCTTGATTTCGGTGGCCGAAATGCGCCGCACCAGGTGCTTGGCCTCCAGTTGTGCCGGATGCTCCAGGCCTGCCGCCGCCAGCATTTCTGCCAAGGCACGCAACGTGTTGTGATGGAAGTTCAGCACCCGCTGGGCTTTGTCGGGCACCACCAGCGCGCGCTGGCGCAGCGGATCTTGCGTGGCCACGCCGGTCGGGCATTTGTTGGTGTGGCAGCTTTGCGACTGGATGCAGCCGATGGC  >  NC_002947/1210928‑1211221

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.