New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1393928 | 62 (1.000) | 3 (0.050) | 3/254 | NT | 5.6% | coding (279/618 nt) | ruvA | Holliday junction ATP‑dependent DNA helicase RuvA |
? | NC_002947 | = 1393971 | 42 (0.710) | coding (322/618 nt) | ruvA | Holliday junction ATP‑dependent DNA helicase RuvA |
GCTCTACGGCTTTGCCGAAAAGCGCGAGCGCGAGCTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTCGCCAGCGAGTCCAG > NC_002947/1393826‑1394119 | gCTCTACGGCTTTGCCGAAAAGCGCGAGCGCGAGCTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTca > 6:47338‑M2/1‑146 (MQ=255) tACGGCTTTGCCGAAAAGCGCGAGCGCGAGCTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCt > 6:191566/1‑149 (MQ=255) cGGCTTTGCCGAAAAGCGCGAGCGCGAGCTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCt < 1:320974/147‑1 (MQ=255) gCTTTGCCGAAAAGCGCGAGCGCGAGCTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTg > 5:215412/1‑149 (MQ=255) ccGAAAAGCGCGAGCGCGAGCTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGt < 7:151657/148‑1 (MQ=255) cGAAAAGCGCGAGCGCGAGCTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGc > 7:50286/1‑149 (MQ=255) aaaGCGCGAGCGCGAGCTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCgg < 5:191353/149‑1 (MQ=255) agcgcgagcgcgAGCTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGc < 5:68648/149‑1 (MQ=255) gcgagcgcgagcTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTc < 3:233734/149‑1 (MQ=255) gagcgcgagcTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGt < 5:387385/131‑1 (MQ=255) gagcgcgagcTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGt > 6:387385/1‑131 (MQ=255) gcgcgagcTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCa < 6:203821/149‑1 (MQ=255) gagcTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGa > 3:278330/1‑148 (MQ=255) tGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAAcc > 3:92481/1‑149 (MQ=255) tGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAAcc > 5:107810/1‑149 (MQ=255) tCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTg > 6:352896/1‑149 (MQ=255) gCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTc < 5:327726/149‑1 (MQ=255) gCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCATCGGCAAGAAAACCGCCGAGCGCTTGCTGGTc > 5:381858/1‑149 (MQ=255) ccGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGttt > 1:379446/1‑149 (MQ=255) gAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTc > 3:290409/1‑148 (MQ=255) gCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTg < 8:327640/149‑1 (MQ=255) ccTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCgg < 6:376217/86‑1 (MQ=255) ccTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCgg > 5:376217/1‑86 (MQ=255) ccTGGCGCTGATGTCCGGGCTGGAAGTGGAGGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTggg < 4:25580/149‑1 (MQ=255) gcTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCa < 6:103417/89‑1 (MQ=255) gcTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCa > 5:103417/1‑89 (MQ=255) gTCCGGGCTTGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGTCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCg < 4:218560/148‑1 (MQ=255) gTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTcagcccggacatcagcgccagggccagcttcggccctacgccgttcaggcggataagctcgcggaacagctcgcgctcgcgcttttcggcaaagcc < 5:393504‑M2/149‑97 (MQ=255) gTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAGCCTCGCCgg > 8:356324/1‑149 (MQ=255) cccggggCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCgg < 1:332437/145‑1 (MQ=255) tCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGc < 4:92481/149‑1 (MQ=255) cGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCa > 4:61933/1‑149 (MQ=255) cGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCa > 4:321640/1‑149 (MQ=255) cGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCa > 6:50539/1‑149 (MQ=255) gggCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCAt < 6:215412/149‑1 (MQ=255) aaGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCAcc < 8:50286/149‑1 (MQ=255) gATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGgt > 6:91579/1‑149 (MQ=255) tGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGAt > 3:164992/1‑149 (MQ=255) gTGCGCTGCGTGCAGGCCCAGGACACCTcagcccggacatcagcgccagggccagcttcggccctacgccgttcaggcggatcagctcgcggaacagctcgcgctcg < 6:173852‑M2/107‑80 (MQ=255) gTGCGCTGCGTGCAGGCCCAGGACACCTcagcccggacatcagcgccagggccagcttcggccctacgccgttcaggcggatcagctcgcggaacagctcgcgctcg > 5:173852‑M2/1‑28 (MQ=255) gTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCCAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATgg > 8:191247/1‑149 (MQ=255) gTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGGAAAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATg < 1:52851/149‑1 (MQ=255) gTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATgg > 5:386608/1‑149 (MQ=255) cgcTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGc < 3:61933/148‑1 (MQ=255) cgcTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGc < 5:191566/148‑1 (MQ=255) cGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCATCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCttt < 6:381858/147‑1 (MQ=255) aGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTc < 5:352896/149‑1 (MQ=255) cccAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTCGc > 5:144483/1‑148 (MQ=255) ccAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTCGCCa > 2:48439/1‑149 (MQ=255) cacgACACCTCACCCCGGGCGCGCGTCCCGGGCGTCGGCAAGACAACCTCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTCGCCAg < 4:278330/146‑1 (MQ=255) ggACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTCGCCAGCg < 7:80981/149‑1 (MQ=255) ccTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTCGCCAGCGAGTc > 1:219557/1‑148 (MQ=255) cTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTCGCCAGCGAGTc > 6:177206/1‑147 (MQ=255) cTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGATCGCCAGCGAGTc > 1:134273/1‑147 (MQ=255) tCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTc < 2:129826/135‑1 (MQ=255) tCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTc > 1:129826/1‑135 (MQ=255) tCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTCGCCAGCGAGTCCAg > 6:330506/1‑149 (MQ=255) | GCTCTACGGCTTTGCCGAAAAGCGCGAGCGCGAGCTGTTCCGCGAGCTGATCCGCCTGAACGGCGTAGGGCCGAAGCTGGCCCTGGCGCTGATGTCCGGGCTGGAAGTGGATGAACTGGTGCGCTGCGTGCAGGCCCAGGACACCTCAGCCCTGGTGCGCGTGCCGGGCGTCGGCAAGAAAACCGCCGAGCGCTTGCTGGTCGAGCTCAAGGACCGTTTCAAGGCCTGGG‑AAACCTCGCCGGCCATGTTCACCCTGGTGTCCGATGGGCCTTTACCGGTCGCCAGCGAGTCCAG > NC_002947/1393826‑1394119 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |