New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1880754 =70 (1.130)4 (0.070) 4/256 NT 5.8% coding (428/930 nt) PP_1688 LysR family transcriptional regulator
?NC_002947 1880799 = 63 (1.060)coding (473/930 nt) PP_1688 LysR family transcriptional regulator

CCGTTGATACCTGCTTTCAGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTGGGGCTTCATGCGG  >  NC_002947/1880651‑1880947
                                                                                                                                                    |                                                                                                                                                    
ccGTTGATACCTGCTTTCAGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCAt                                                                                                                                                      >  1:347788/1‑149 (MQ=255)
 cGTTGATACCTGCTTTCAGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTAAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATc                                                                                                                                                     >  7:245039/1‑149 (MQ=255)
   ttGATACCTGCTTTCAGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGc                                                                                                                                                   <  1:67137/149‑1 (MQ=255)
   accaggcaacggtgcccgcgcaaggcctcgggcgtggcaggtacgccagcgctctgcaggtaaccgggtgaggcacaacaaatgaacgggatgcgggcgaTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGc                                                                                                                                                   >  3:256583‑M1/101‑149 (MQ=255)
    ccaggcaacggtgcccgcgcaaggcctcgggcgtggcaggtacgccagcgctctgcaggtaaccgggtgaggcacaacaaatgaacgggatgcgggcgaTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGcc                                                                                                                                                  >  6:4852‑M1/100‑149 (MQ=255)
     gATACCTGCTTTCAGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGccc                                                                                                                                                 >  8:92152/1‑149 (MQ=255)
      aTACCTGCTTTCAGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGccc                                                                                                                                                 <  6:299552/148‑1 (MQ=255)
      aTACCTGCTTTCAGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCg                                                                                                                                                >  6:236011/1‑149 (MQ=255)
          cTGCTTTCAGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATc                                                                                                                                            >  1:346101/1‑149 (MQ=255)
          cTGCTTTCAGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATc                                                                                                                                            >  4:261071/1‑149 (MQ=255)
                  aGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCAt                                                                                                                                    >  7:87410/1‑149 (MQ=255)
                    tGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCAttt                                                                                                                                  <  8:282205/149‑1 (MQ=255)
                       ccGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATttgtt                                                                                                                               <  5:236011/149‑1 (MQ=255)
                        cGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGGGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATttgttg                                                                                                                              <  6:162662/149‑1 (MQ=255)
                         gCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTtgttgt                                                                                                                             <  5:71660/149‑1 (MQ=255)
                          cTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTtgtg                                                                                                                            <  2:346101/149‑1 (MQ=255)
                               cTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGc                                                                                                                                               >  3:295057/1‑125 (MQ=255)
                               cTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGc                                                                                                                                               <  4:295057/125‑1 (MQ=255)
                               cTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCa                                                                                                                       >  1:142005/1‑149 (MQ=255)
                               cTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCa                                                                                                                       >  3:285222/1‑149 (MQ=255)
                                tttACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCAc                                                                                                                      >  5:65493/1‑149 (MQ=255)
                                  tACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCAcc                                                                                                                     <  1:381700/148‑1 (MQ=255)
                                    cTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCTCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCgg                                                                                                                  <  6:39272/149‑1 (MQ=255)
                                         gATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCAt                                                                                                                                             >  6:24559/1‑117 (MQ=255)
                                         gATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCAt                                                                                                                                             <  5:24559/117‑1 (MQ=255)
                                         gATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTAca                                                                                                             >  1:903/1‑148 (MQ=255)
                                           tAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTg                                                                                                           >  8:131351/1‑149 (MQ=255)
                                             gagTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGtt                                                                                                                >  5:297515/1‑142 (MQ=255)
                                             gagTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGtt                                                                                                                <  6:297515/142‑1 (MQ=255)
                                                   gTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAgcgc                                                                                                   >  3:244695/1‑149 (MQ=255)
                                                    tAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCt                                                                                                  >  7:120449/1‑149 (MQ=255)
                                                        gACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGtt                                                                                                                                       <  8:279267/108‑1 (MQ=255)
                                                        gACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGtt                                                                                                                                       >  7:279267/1‑108 (MQ=255)
                                                         aCTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCAGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTAACCTGCAGAGCGCTGGCg                                                                                              >  7:139165/1‑148 (MQ=255)
                                                             aTCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCTTCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTAc                                                                                           <  3:9189/147‑1 (MQ=255)
                                                             aTCGTCGGGTTAACCATGCCCGTGAAGACGGTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCATCTGCTGGCCCGGCGCATCGCCCGCATCCAGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTAc                                                                                           <  6:321031/147‑1 (MQ=255)
                                                              aagtcgGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTg                                                                                        <  3:59789/147‑1 (MQ=255)
                                                                gtcgGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTAcc                                                                                                             >  7:297705/1‑126 (MQ=255)
                                                                gtcgGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTAcc                                                                                                             <  8:297705/126‑1 (MQ=255)
                                                                gtcgGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCt                                                                                         >  4:177928/1‑146 (MQ=255)
                                                                gtcgGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCt                                                                                         <  3:177928/146‑1 (MQ=255)
                                                                gtcgGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGcc                                                                                      <  7:293022/149‑1 (MQ=255)
                                                                gtcgGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGc                                                                                       <  3:261071/148‑1 (MQ=255)
                                                                 tcgGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCa                                                                                     >  6:17707/1‑149 (MQ=255)
                                                                 tcgGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCa                                                                                     >  7:143426/1‑149 (MQ=255)
                                                                   gggTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACg                                                                                   >  3:139176/1‑149 (MQ=255)
                                                                       tAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGccc                                                                                >  3:243312/1‑148 (MQ=255)
                                                                         aCCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAg                                                                             <  5:17707/149‑1 (MQ=255)
                                                                              gCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCtt                                                                        >  8:142955/1‑149 (MQ=255)
                                                                               cccGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCtt                                                                        <  7:131351/148‑1 (MQ=255)
                                                                                ccGTGAAGACGTTGACGTGAGCCTGCGCTTTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTgc                                                                      <  2:18709/149‑1 (MQ=255)
                                                                                ccGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCCGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGACACGCCCGCGGCCTTgc                                                                      >  8:342165/1‑149 (MQ=255)
                                                                                ccGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAggagatg                                                                       >  3:5654/1‑143 (MQ=255)
                                                                                     aaGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCgg                                                                  <  2:121607/148‑1 (MQ=255)
                                                                                         cGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCAcc                                                             <  5:96862/149‑1 (MQ=255)
                                                                                              aCGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGc                                                        <  7:142955/149‑1 (MQ=255)
                                                                                                 tGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACGCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTg                                                     <  6:65493/149‑1 (MQ=255)
                                                                                                  ggcgatgcgccgggccagcagctggtcttcgagctgcggggcaatgcgcaTCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTgg                                                    >  6:4852‑M2/51‑149 (MQ=255)
                                                                                                   gcgatgcgccgggccagcagctggtcttcgagctgcggggcaatgcgcaTCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGgt                                                   >  3:256583‑M2/50‑149 (MQ=255)
                                                                                                   aGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGgt                                                   <  8:120449/149‑1 (MQ=255)
                                                                                                      cTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGtt                                                <  1:313421/149‑1 (MQ=255)
                                                                                                       tgcgccgggccagcagctggtcttcgagctgcggggcaatgcgcaTCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGttt                                               <  4:256583‑M2/104‑1 (MQ=255)
                                                                                                        GCGCATTGCACCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTc                                              >  8:356051‑M1/1‑149 (MQ=255)
                                                                                                         CGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATGCCGTTGATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTAGCTGCCTCGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTc                                              >  8:87410‑M1/1‑148 (MQ=255)
                                                                                                         CGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTc                                              >  7:342165‑M1/1‑148 (MQ=255)
                                                                                                         CGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCg                                             >  7:92152‑M1/1‑149 (MQ=255)
                                                                                                                   cGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTg                                   <  8:143426/149‑1 (MQ=255)
                                                                                                                           gAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTCCCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGc                             <  7:126169/147‑1 (MQ=255)
                                                                                                                           gAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGAt                                >  8:24254/1‑144 (MQ=255)
                                                                                                                           gAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGAt                                <  7:24254/144‑1 (MQ=255)
                                                                                                                              gACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGctt                        >  1:326374/1‑149 (MQ=255)
                                                                                                                                  gctgcggggcaatgcgcaTCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTg                    <  5:4852‑M2/131‑1 (MQ=255)
                                                                                                                                   gcttatgGCACGTCTCATCGCCCGCATCCCGTTCATTTTTTGTGACTCACCCTGTTACCTGGATAGCGGTGGCGTACGTGCCACGCCCGATGCCTTGCGCGGGCTCCGTTTCCTGTTGTTTCGCTATCCGGTTGATGGCCGcttctttc                   <  8:139165/144‑3 (MQ=255)
                                                                                                                                   gctgctGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTgc                   >  5:121561/1‑149 (MQ=255)
                                                                                                                                     tgctgGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGct                         >  5:374073/1‑141 (MQ=255)
                                                                                                                                     tgctgGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGct                         <  6:374073/141‑1 (MQ=255)
                                                                                                                                          gCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTgggg            >  8:239030/1‑149 (MQ=255)
                                                                                                                                          gCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTggg             <  2:142005/148‑1 (MQ=255)
                                                                                                                                          gCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTgg              <  4:139176/147‑1 (MQ=255)
                                                                                                                                            ccGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTGGGGCt          >  4:20030/1‑149 (MQ=255)
                                                                                                                                             cGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTGGGGCt          >  4:41492/1‑148 (MQ=255)
                                                                                                                                               gcgcaTCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTGGGGCTTCa       >  4:195971‑M2/6‑149 (MQ=255)
                                                                                                                                               gcgcaTCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTGGGGCTTCa       >  8:39010‑M2/6‑149 (MQ=255)
                                                                                                                                                 gcaTCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTACCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTGGGGCTTCATg     >  1:115900‑M2/4‑149 (MQ=255)
                                                                                                                                                  caTCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTGGGGCTTCATGc    <  1:202411‑M2/147‑1 (MQ=255)
                                                                                                                                                    tCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTGGGGCTTCATGCgg  <  4:244695/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCGTTGATACCTGCTTTCAGTGCCCGCTACCCTTTACTTTCGATAGAGTTGGTAACGACTGATCGTCGGGTTAACCATGCCCGTGAAGACGTTGACGTGAGCCTGCGCATTGCCCCGCAGCTCGAAGACCAGCTGCTGGCCCGGCGCATCGCCCGCATCCCGTTCATTTGTTGTGCCTCACCCGGTTACCTGCAGAGCGCTGGCGTACCTGCCACGCCCGAGGCCTTGCGCGGGCACCGTTGCCTGGTGTTTCGCTATCCGGTGGATGGCCGCTTCTTGCGCTGGGGCTTCATGCGG  >  NC_002947/1880651‑1880947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.