New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4304612	61 (0.980)	3 (0.050)	3/250	NT	5.1%	coding (598/915 nt)	PP_3776	permease RarD
	?	NC_002947	= 4304637	54 (0.930)					coding (573/915 nt)	PP_3776	permease RarD

AGAGGCAGCCGCCGTGCAGCGAACGAAAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGCCCGCCTTTTTCGAACAGCAGG  >  NC_002947/4304491‑4304781                                                                                                                                                   |                                                                                                                                                 agagGCAGCCGCCGTGCAGCGAACGAAAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGGCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATcagc                                                                                                                                                  <  2:46700/147‑1 (MQ=255)   agGCAGCCGCCGTGCAGCGAACGAAAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCagca                                                                                                                                              <  7:259519‑M2/149‑5 (MQ=255)       aGCCGCCGTGCAGCGAACGAAAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCagcacgcc                                                                                                                                          <  7:292658‑M2/149‑9 (MQ=255)       aGCCGCCGTGCAGCGAACGAAAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCagcacgcc                                                                                                                                          >  6:219242‑M2/1‑141 (MQ=255)        gccgccGTGCAGCGAACGAAAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGccc                                                                                                                                         <  8:20111/149‑1 (MQ=255)                 cAGCGAACGAAAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGc                                                                                                                                <  5:337222/149‑1 (MQ=255)                 cAGCGAACGAAAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGc                                                                                                                                <  3:68405/149‑1 (MQ=255)                   gCGAACGAAAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGa                                                                                                                              <  7:228401/149‑1 (MQ=255)                      aacgaaAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTc                                                                                                                           <  8:276398/149‑1 (MQ=255)                       acgaaAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTcc                                                                                                                          <  7:655/149‑1 (MQ=255)                         gaaAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTc                                                                                                                           >  2:319769/1‑146 (MQ=255)                            aaGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCa                                                                                                                         <  1:386427/145‑1 (MQ=255)                            aaGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCa                                                                                                                         >  2:386427/1‑145 (MQ=255)                            aaGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGaaa                                                                                                                     <  6:41917/149‑1 (MQ=255)                              gagCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGaaa                                                                                                                     >  7:159532/1‑147 (MQ=255)                                gcgcCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAACAGCACGCCCAGCACGAGCGACTCCAGAAACAgg                                                                                                                 <  7:61928/149‑1 (MQ=255)                                    cAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGccc                                                                                                              >  6:342481/1‑148 (MQ=255)                                         gCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCAc                                                                                                        <  5:194565/149‑1 (MQ=255)                                         gCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCAc                                                                                                        >  1:89404/1‑149 (MQ=255)                                           aaTAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACg                                                                                                       >  6:11525/1‑148 (MQ=255)                                             tAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACCGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAg                                                                                                    >  4:168456/1‑149 (MQ=255)                                             tAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAg                                                                                                    <  3:215208/149‑1 (MQ=255)                                                ggAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCa                                                                                                 <  5:11525/149‑1 (MQ=255)                                                  aaaCTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGt                                                                                               <  5:202343/149‑1 (MQ=255)                                                     cTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGa                                                                                            <  2:89404/149‑1 (MQ=255)                                                        cgccgcAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGc                                                                                          <  5:370279/148‑1 (MQ=255)                                                        cgccgcAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGc                                                                                          <  5:361502/148‑1 (MQ=255)                                                         gccgcAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGc                                                                                          >  6:52787/1‑147 (MQ=255)                                                             cAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGctt                                                                                    >  4:38997/1‑149 (MQ=255)                                                                  cagcagcagcGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCTCGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGa                                                                               <  1:100509/149‑1 (MQ=255)                                                                  cagcagcagcGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGa                                                                               <  8:301695/149‑1 (MQ=255)                                                                  cagcagcagcGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGa                                                                               <  5:52787/149‑1 (MQ=255)                                                                       gcagcGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAg                                                                          <  5:342481/149‑1 (MQ=255)                                                                       gcagcGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAg                                                                          >  5:164989/1‑149 (MQ=255)                                                                          gcgcCGTGTCACCGGAGCCCAGGGCGGCGATCCCCGCCACACGCGTGCTCACCCACAGGAGCAGCGGCATCACCAGCACGCCCAGCACGCGCGACTCCAGAAACAGGCCCGACCACGGAgg                                                                                                   >  3:79183/1‑121 (MQ=255)                                                                            gcCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGgtgt                                                                      >  3:46664/1‑148 (MQ=255)                                                                                  tCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGc                                                                <  5:28167/148‑1 (MQ=255)                                                                                          gCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCa                                                       <  8:259519/149‑1 (MQ=255)                                                                                             cAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGc                                                    <  5:141625/149‑1 (MQ=255)                                                                                                 gcggcgATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAAt                                                <  4:46664/149‑1 (MQ=255)                                                                                                    gcgATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGAc                                             <  8:292658/149‑1 (MQ=255)                                                                                                          cccGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGaa                                       >  4:155672/1‑149 (MQ=255)                                                                                                          cccGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGa                                        <  3:38997/148‑1 (MQ=255)                                                                                                          cccGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGa                                        <  1:214045/148‑1 (MQ=255)                                                                                                           ccGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCCCGCCAATGACCAGGaa                                       >  1:351122/1‑148 (MQ=255)                                                                                                              ccACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCagcacgcctgtggcgggtatcgccgccctgggctccgctgacacggcgctgctgctgctttgcg                                                                                  >  7:32975‑M2/1‑38 (MQ=255)                                                                                                              ccACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCagcacgcctgtggcgggtatcgccgccctgggctccgctgacacggcgctgctgctgctttgcg                                                                                  <  8:32975‑M2/102‑65 (MQ=255)                                                                                                              ccACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACt                                   >  2:61656/1‑149 (MQ=255)                                                                                                                  aGGCGTGCTCACCCACAGGATCAGCGGCATCAGCagcacgcctgtggcgggtatcgccgccctgggctccgctgacacggcgctgctgctgctttgcggcgcagtttccctattgccgctggcgctcttttcgttcgctgcacggcggc                               <  1:142135‑M2/149‑116 (MQ=255)                                                                                                                      gTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTc                           >  7:229656/1‑149 (MQ=255)                                                                                                                        gCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGACACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGAGGTCCa                         >  8:208393/1‑149 (MQ=255)                                                                                                                            aCCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGc                       <  6:164989/147‑1 (MQ=255)                                                                                                                              ccACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCa                                           >  6:203026/1‑125 (MQ=255)                                                                                                                              ccACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCa                                           <  5:203026/125‑1 (MQ=255)                                                                                                                                    gATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGCCCGCCttttt             >  7:274013/1‑149 (MQ=255)                                                                                                                                    gATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGCCCGCCttttt             >  7:11985/1‑149 (MQ=255)                                                                                                                                     aTCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTACCCCAGGTCACGACAATGACCAGGAACACTCGGCTGTCCAGCCCGCCTTTTTc            >  6:347477/1‑149 (MQ=255)                                                                                                                                      tCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGCCCGCCTTTTTc            >  8:96304/1‑148 (MQ=255)                                                                                                                                       cAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGCCCGCCTTTTTCg           >  7:32191/1‑148 (MQ=255)                                                                                                                                        aGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGCCCGCCTTTTTCGaa         >  5:158186/1‑149 (MQ=255)                                                                                                                                        aGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGCCCGCCTTTTTCGaa         >  4:215681/1‑149 (MQ=255)                                                                                                                                         gCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGCCCGCCTTTTTCGAAc        <  1:61656/149‑1 (MQ=255)                                                                                                                                               tCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGCCCGCCTTTTTCGAACAGCAgg  <  8:32191/149‑1 (MQ=255)                                                                                                                                               tCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTATCCAGCCCGCCTTTTTCGAACAGCAgg  >  1:299897/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                 AGAGGCAGCCGCCGTGCAGCGAACGAAAAGAGCGCCAGCGGCAATAGGGAAACTGCGCCGCAAAGCAGCAGCAGCGCCGTGTCAGCGGAGCCCAGGGCGGCGATACCCGCCACAGGCGTGCTCACCCACAGGATCAGCGGCATCAGCAGCACGCCCAGCACGAGCGACTCCAGAAACAGGCCCGACCACGGAGGCAGTCGAGCCAGCTTCTTGAGCCAGGTGTAAGTGCCCCAGGTCACGCCAATGACCAGGAACACTCGGCTGTCCAGCCCGCCTTTTTCGAACAGCAGG  >  NC_002947/4304491‑4304781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.