New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5781028 =	60 (0.970)	4 (0.070)	4/254	NT	7.2%	coding (1332/1794 nt)	cvrA	K(+)/H(+) antiporter NhaP
	?	NC_002947	5781123 =	46 (0.780)					coding (1427/1794 nt)	cvrA	K(+)/H(+) antiporter NhaP

CCAGCGAGTGGGAGATGTTCGTCTACCGCCTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTCGTGCTCGAAGGCGATGCCGAACTGGGT  >  NC_002947/5780976‑5781268                                                                                                                                                    |                                                                                                                                                  ccAGCGAGTGGGAGATGTTCGTCTACCGCCTGGGCGCAGAAAAATGGTGCCTCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTg                                                                                                                                                  <  7:203916/149‑1 (MQ=255)   cagggtgtgttcgtggccgatcacgcagagcatgtcgccaacctccagcaCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCt                                                                                                                                                >  2:172689‑M1/51‑149 (MQ=255)           ggAGATGTTCGTCTACCGCCTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTg                                                                                                                                        <  7:281073/149‑1 (MQ=255)                 gTTCGTCTACCGCCTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACa                                                                                                                                  >  4:69083/1‑149 (MQ=255)                  ttCGTCTACCGCCTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGccgat                                                                                                                                  >  7:211865/1‑144 (MQ=255)                  ttCGTCTACCGCCT‑GGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATg                                                                                                                                >  8:312114/1‑149 (MQ=255)                          ccGCCTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTg                                                                                                                           <  7:237460/147‑1 (MQ=255)                          ccGCCTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCg                                                                                                                         >  6:233598/1‑149 (MQ=255)                          ccGCCTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCg                                                                                                                         <  6:366544/149‑1 (MQ=255)                          ccGCCTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCg                                                                                                                         >  2:39307/1‑149 (MQ=255)                           cGCCTGGGCGCAGAAAAAGGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGt                                                                                                                        <  5:323061/149‑1 (MQ=255)                            gCCTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTg                                                                                                                       <  2:115837/149‑1 (MQ=255)                              cTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGAt                                                                                                                     <  6:199779/149‑1 (MQ=255)                                gggCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATg                                                                                                                                >  6:391649/1‑136 (MQ=255)                                      aGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCAc                                                                                                              >  8:248549/1‑148 (MQ=255)                                         aaaaTGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAac                                                                                                          <  6:382785/149‑1 (MQ=255)                                          aaaTGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAaca                                                                                                         >  1:35007/1‑149 (MQ=255)                                                 gCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTg                                                                                                  >  5:284946/1‑149 (MQ=255)                                                 agcacggtgctgcccgacgggtgcagcagttgctcaccacggaacagcgcggcaatccgcgtgccttcgggcattttcagttcgcgcagggcggcaccgTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACACCCTg                                                                                                  >  2:172689‑M2/100‑149 (MQ=255)                                                    tCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCg                                                                                               <  6:13958/149‑1 (MQ=255)                                                      GGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCgg                                                                                              >  8:192259‑M1/1‑148 (MQ=255)                                                      GGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCgg                                                                                              >  1:39307‑M1/1‑148 (MQ=255)                                                       gtgctgcccgacgggtgcagcagttgctcaccacggaacagcgcggcaatccgcgtgccttcgggcattttcagttcgcgcagggcggcaccgTGCTGGAGGTTGGCGCCATGCTCTGCGTGATCGGCCACGAACACCACCTGCCGGcc                                                                                            >  7:290465‑M2/94‑149 (MQ=255)                                                       GTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGcc                                                                                            <  8:87780‑M1/149‑1 (MQ=255)                                                        TGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGccc                                                                                           <  3:328781‑M1/149‑1 (MQ=255)                                                          CCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCt                                                                                          >  7:248549‑M1/1‑148 (MQ=255)                                                            gccCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCgg                                                                                       >  5:71661/1‑149 (MQ=255)                                                              ccTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTg                                                                                                                           >  4:361202/1‑111 (MQ=255)                                                              ccTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTg                                                                                                                           <  3:361202/111‑1 (MQ=255)                                                               cTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTaa                                                                                    <  6:71661/149‑1 (MQ=255)                                                                  cgcgAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAgt                                                                                  <  5:233598/148‑1 (MQ=255)                                                                         tGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGc                                                                          >  2:246483/1‑149 (MQ=255)                                                                           aaaaTGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGcc                                                                         <  3:69083/148‑1 (MQ=255)                                                                              aTGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGgc                                                                     <  7:87780/149‑1 (MQ=255)                                                                                  ccGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTACGTTGTTCAGCCAGGCGCca                                                                 >  6:21454/1‑149 (MQ=255)                                                                                  ccGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGgccacg                                                                 >  4:305360/1‑145 (MQ=255)                                                                                   cGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCca                                                                 >  5:197109/1‑148 (MQ=255)                                                                                    gAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCcaca                                                               <  2:35007/149‑1 (MQ=255)                                                                                         ggaacagcgcggcaatccgcgtgccttcgggcattttcagttcgcgcagggcggcaccgTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTg                                                          >  7:305846‑M2/60‑149 (MQ=255)                                                                                          aCGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCTCAGCGTgg                                                         >  3:359147/1‑149 (MQ=255)                                                                                               gATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTg                                                     >  3:134933/1‑148 (MQ=255)                                                                                                    ccGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAgttgtt                                                                              >  7:342286/1‑118 (MQ=255)                                                                                                    ccGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAgttgtt                                                                              <  8:342286/118‑1 (MQ=255)                                                                                                     cgcgCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGACTGGACCTgc                                              >  1:326851/1‑149 (MQ=255)                                                                                                       agcTGTTGCGTGGTTAGCAACTTCTGCACTCGTGGTGCAGCACCGTGCTGGAGGTTGGCGTCTTGAGCTGCGTGATCGGCCACGATCTCATCCTGCCGGGCCTCGGTATGTTGTTCAGCCAGGCGCCACATCGTGGCCTGGACCTgcgc                                            <  4:196082/148‑1 (MQ=255)                                                                                                               cGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCgg                                    >  4:276227/1‑149 (MQ=255)                                                                                                                gtggtgAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGc                                   <  4:328781/149‑1 (MQ=255)                                                                                                                 tggtgAGCAACTGCTGCACCCGTCGGGCAGCCCCGTGCTGGCGGTTGGCGACATGCTCTGCGTGATCGGCCACGCCCACACCCTGCCGGCCCTCGGTACGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGCGCTGCGCGTCTGCGGc                                   >  5:182800/1‑148 (MQ=255)                                                                                                                    tgAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACt                               >  1:144309/1‑149 (MQ=255)                                                                                                                      aGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTc                             >  6:177318/1‑149 (MQ=255)                                                                                                                        cattttcagttcgcgcagggcggcaccgTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTCGt                           <  1:172689‑M2/121‑1 (MQ=255)                                                                                                                                 cACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTCGTGCTCGAAgg                  >  1:169895/1‑149 (MQ=255)                                                                                                                                  aCCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCGCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTCGTGCTCGAAGGc                 <  7:312114/149‑1 (MQ=255)                                                                                                                                    ccGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTgc                                              >  2:362471/1‑118 (MQ=255)                                                                                                                                    ccGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTgc                                              <  1:362471/118‑1 (MQ=255)                                                                                                                                    ccGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTCGTGCTCGAAGGCGa               >  3:154817/1‑149 (MQ=255)                                                                                                                                      gTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTCGTGCTCGAAGGCGATg             <  2:144309/149‑1 (MQ=255)                                                                                                                                          ggCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTCGTGCTCGAAGGCGATGCCg          >  5:152972/1‑148 (MQ=255)                                                                                                                                             agcaCCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTCGTGCTCGAAGGCGATGCCGAACt      <  3:276227/149‑1 (MQ=255)                                                                                                                                                 ccgTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTCGTGCTCGAAGGCGATGCCGAACTGGGt  >  4:379953‑M2/4‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                  CCAGCGAGTGGGAGATGTTCGTCTACCGCCTGGGCGCAGAAAAATGGTGCATCGGTGCCGCCCTGCGCGAACTGAAAATGCCCGAAGGCACGCGGATTGCCGCGCTGTTCCGTGGTGAGCAACTGCTGCACCCGTCGGGCAGCACCGTGCTGGAGGTTGGCGACATGCTCTGCGTGATCGGCCACGAACACAACCTGCCGGCCCTCGGTAAGTTGTTCAGCCAGGCGCCACAGCGTGGCCTGGACCTGCGCTTCTTCGGCGACTTCGTGCTCGAAGGCGATGCCGAACTGGGT  >  NC_002947/5780976‑5781268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.