| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4808179 | 2 (0.030) | 16 (0.250) | 13/238 | 2.4 | 47.3% | intergenic (‑288/‑267) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | NC_002947 | = 5988949 | 34 (0.530) | intergenic (+243/‑303) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
GCAATGGGCGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAG > NC_002947/4808035‑4808325 | gCAATGGGCGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGAGTTTCAGCGCCTGGGAGGTGGACGCCGCGAGGGTGTCAGCGGCTGGGAGATCGAGCGCCGCCCGCGcg > 5:360690‑M1/1‑145 (MQ=255) cGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGACTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcg > 3:392053‑M1/1‑137 (MQ=255) cGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGGTTTCAGCGCCTGGGAGGTGCTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcg < 5:92644‑M1/147‑11 (MQ=255) gcgcTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTCTTCGCCGGGCGAGTTTCAGCGACTGGGAGTTGATCGCGGGGAGAGTTTAATCGCCTGGTAGATAGATCGCCGCCCGCGAGGCGCtacgcgcgtaaaa > 1:233372/1‑141 (MQ=255) cgcTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTCTTCGCCCGGCGATTTTCAGCTCCTGGGAGGTGTACGCAGGGAGAGTTTGAGCGCATGGGATATAGAGCCACGCACGCCCCGCGCTACgcgggtaaac > 5:307127/1‑142 (MQ=255) cgcTTTGGCGGGTAGGTGTTTGGCGCGAGGCTTTCAGAGCCTGGTAGGTTTTCGCCGGTGGATTTTCAGCGCCGGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacc < 1:344514‑M1/148‑21 (MQ=255) cgtgtagGTGTTTGGCGGCAGGAGTGCCTCGCCTGGTAGGTGTTCGCCGGTTGTTTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcc < 6:360690‑M1/143‑27 (MQ=255) gattggCGGTAGTGTTTCAGTGCCTGGGAGGTGTTGGCCGGGGGAGGTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtt < 4:178709‑M1/145‑37 (MQ=255) ggCGGGAGGATAGCTGCGCCGGGGAGGTCTGGGCCGGGGGTATGTGAGCGCCTGGGAGCTGTTCGCCGTGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgg < 8:374587‑M1/147‑41 (MQ=255) gatgtttTCAGCTCCTGTGAGGTTTCGGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaa < 1:322379‑M1/144‑46 (MQ=255) ccGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGAACGAGCGCCGCCCGCGcggcgcttcgcg > 2:146877‑M1/1‑74 (MQ=255) ccGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGAACGAGCGCCGCCCGCGcggcgcttcgcg < 1:146877‑M1/86‑13 (MQ=255) ggATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattattcctgcgggatttgcgcgcgaccgccttg > 3:157942‑M1/1‑69 (MQ=255) gATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattattcctgcgggatttgcgcgcgaccgccttggg < 1:232760‑M1/148‑81 (MQ=255) aTTTTCAGCGCCTGGGAGGAGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattattcctgcgggatttgcgcgcgaccgccttggg > 3:273917‑M1/1‑67 (MQ=255) ttCATCGCCTGGGAGGTGTTCGCCGGGAGAGTTACAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcgggccaattattcctgcgggatttgcgcgcgaccgccttggggca < 8:148564‑M1/147‑84 (MQ=255) tCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttc < 7:170642‑M1/101‑39 (MQ=255) gaattttgaggtgttTGCCGGAGGATTTTCAGCGCCTGTGAGATCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttcggccagtccctcctgcaccagtcgcgcgcgaccgccttgtttgtacgacg < 7:92166‑M1/140‑89 (MQ=255) agaTCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgaccgccttgtttgtacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgtc < 8:255841‑M1/147‑129 (MQ=255) tCGAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgaccgccttgtttgtacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgtcccac < 7:158269‑M1/148‑133 (MQ=255) gAGCGCCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgaccgccttgtttgtacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgtcccaca < 2:132541‑M1/147‑134 (MQ=255) gcgcCGCCCGCGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgaccgccttgtttgtacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgtcccacag > 3:325866‑M1/1‑12 (MQ=255) gcccgcGcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgaccgccttgtttgtacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgtcccacaggaataa < 3:24824‑M1/147‑141 (MQ=255) cgcggcgcttcgcgggtaaacccgctcctacgtttgtttctggccaatccctcctgtgccaggcgcgcgcgaccgccttgtttgtacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgtcccacaggaataactggc < 5:321976‑M1/147‑146 (MQ=255) gcggcgctgcgcgggtaaacccgctcctacggttgtttctggccaatccctcctgtgcccggcgcgcgcgaccgccttgtttggacgacgcgatatcgaggcgtgcgccagggggctcgcgtgcgcgtcccacaggaataactggcc < 3:102016‑M1/147‑147 (MQ=255) | GCAATGGGCGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAACAAAG > NC_002947/4808035‑4808325 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |