New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1050113 =	74 (1.160)	9 (0.150)	8/254	NT	11.8%	coding (740/1098 nt)	PP_0908	hypothetical protein
	?	NC_002947	1050143 =	64 (1.060)					coding (710/1098 nt)	PP_0908	hypothetical protein

CAGCGCGACGGCACCCTGCTGAGCAAGGAAACCCTGGCCCAGCAGATGAACAGCGTGCGACACCTGGCAGTGGCCAGCGATGGCACCATCGCCGCCTGC‑CAGCAG‑TTCATGGGCGATGCCGATGAAACTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1050243‑1050113 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aactgcTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGTGCCGTCGCGCTGCATCAGCACCAGGCTCGGTTGCATGGCGTCGAGGTTCATCTCGA  >  NC_002947/1050143‑1050287                                                                                                                                                                                                                                                                                         CAGCGCGACGGCACCCTGCTGAGCAAGGAAACCCTGGCCCAGCAGATGAACAGCGTGCGACACCTGGCAGTGGCCAGCGATGGCACCATCGCCAGCAGCTCGGCAGTTTCATCGGCATCGCCCATG‑AACTGCTG‑GCAGGCGGCGATGGT                                                                                                                                  <  8:1045/149‑1                                                                                      CCATCGCCGCCTGC‑CAGCAG‑TTCATGGGCGATGCCGATGAAACTGCCGAGCTGCTGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTGCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGTGCCGTCGCGCTG                                              >  3:94510/1‑148                                                                                                CTGC‑CAGCAG‑TTCATGGGCGATGCCGATGAAACTGCTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGTGCCGTCGCGCTGCATCAGCACCAG                                  >  1:78974/1‑149                                                                                                   C‑CAGCAG‑TTCATGGGCGATGCCGATGAAACTGCTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGT                                                          >  7:221769/1‑122                                                                                                   C‑CAGCAG‑TTCATGGGCGATGCCGATGAAACTGCTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGT                                                          <  8:221769/122‑1                                                                                                   C‑CAGCAG‑TTCATGGGCGATGCCGATGAAACTGCTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTCCTCACCAGGGT                                                          >  7:216001/1‑122                                                                                                          G‑TTCATGGGCGATGCCGATGAAACTGCTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGTGCCGTCGCGCTGCATCAGCACCAGGCTCGGTTG                         >  4:334796/1‑149                                                                                                             TCATGGGCGATGCCGATG‑AACTGCTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGTGCCGTCGCGCTGCATC                                          >  8:232382/1‑129                                                                                                                         CCGATGAAACTGCTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGTGCCGTCGCGCTGCATCAGCACCAGGCTCGGTTGCATGGCGTCGAGG            <  3:334796/148‑1                                                                                                                                AACTGCTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGTGCCGTCGCGCTGCATCAGCACCAGGCTCGGTTGCATGGCGTCGAGGTTCATCTC    >  3:267505/1‑149                                                                                                                                  CTGCTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGTGCCGTCGCGCTGCATCAGCACCAGGCTCGGTTGCATGGCGTCGAGGTTCATCTCGA  >  8:105068/1‑149                                                                                                                                   TGCTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGTGCCGTCGCGCTGCATCAGCACCAGGCTCGGTTGCATGGCGTCGAGGTTCATCTCGA  >  8:6349/1‑148                                                                                                                                                                                                                                                                                         CAGCGCGACGGCACCCTGCTGAGCAAGGAAACCCTGGCCCAGCAGATGAACAGCGTGCGACACCTGGCAGTGGCCAGCGATGGCACCATCGCCGCCTGC‑CAGCAG‑TTCATGGGCGATGCCGATGAAACTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1050243‑1050113 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aactgcTG‑GCAGGCGGCGATGGTGCCATCGCTGGCCACTGCCAGGTGTCGCACGCTGTTCATCTGCTGGGCCAGGGTTTCCTTGCTCAGCAGGGTGCCGTCGCGCTGCATCAGCACCAGGCTCGGTTGCATGGCGTCGAGGTTCATCTCGA  >  NC_002947/1050143‑1050287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.