New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2668377 =	48 (0.760)	3 (0.050)	3/256	NT	5.4%	coding (229/1485 nt)	prpD	2‑methylcitrate dehydratase
	?	NC_002947	2668425 =	59 (0.970)					coding (277/1485 nt)	prpD	2‑methylcitrate dehydratase

TGGTCAGCCACTGCCAGGATGCCGCCAAGGTTGTCCGAGGGATGAGCCCATTCGGCGGCCAGCCAGGTGTCGTTGTAGTCCAGCCAGCGCACCGTGCAGCCAA‑TGTCCCAGGCAGCCTTGACCGGGTCGAGGCGATAGGAGGTGCCGGGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2668528‑2668377 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggacATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGTGGCTGACCACCTGTCACAGAAACGGGTTGCCGCGGGTGAAAAGCCACTGC  >  NC_002947/2668425‑2668569                                                                                                                                                                                                                                                                                                            tgaaaAGCCACTGCCAGGATGCCGCCAAGGTTGTCCGAGGGATGAGCCCATTCGGCGGCCAGCCAGGTGTCGTTGTAGTCCAGCCAGCGCACCGTGCAGCCAACTGTCCCAGGCAGCCTTGACCGGGTCGAGGCGATAGGAGGTGCCGG                                                                                                                                                       <  1:80314/144‑1    TCAGCCACTGCCAGGATGCCGCCAAGGTTGTCCGAGGGATGAGCCCATTCGGCGGCCAGCCAGGTGTCGTTGTAGTCCAGCCAGCGCACCGTGCAGCCAA‑TGTCCCAGGCAGCCTTGACCGGGTCGAGGCGATAGGAGGTGCCGGGGAC                                                                                                                                                   <  1:339259/149‑1                                                                                                       A‑TGTCCCAGGCAGCCTTGACCGGGTCGAGGCGATAGGAGGTGCCGGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATACCTCGGACAACCTTGGCGTCATCCTGGCAGTGGCT                                                >  6:395064/1‑149                                                                                                            CCCAGGCAGCCTTGACCGGGTCGAGGCGATAGGAGGTGCCGGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGTGGCTGAC                                             >  5:254992/1‑148                                                                                                                GGCAGCCTTGACCGGGTCGAGGCGATAGGAGGTGCCGGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGTGGCTGACCACCT                                        >  6:119465/1‑149                                                                                                                                                      GGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGTGGCTGACCACCTGTCACAGAAACGGGTTGCCGCGGGTGAAAAGCCACTGC  <  4:207010/149‑1                                                                                                                                                                                                                                                                                                            TGGTCAGCCACTGCCAGGATGCCGCCAAGGTTGTCCGAGGGATGAGCCCATTCGGCGGCCAGCCAGGTGTCGTTGTAGTCCAGCCAGCGCACCGTGCAGCCAA‑TGTCCCAGGCAGCCTTGACCGGGTCGAGGCGATAGGAGGTGCCGGGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2668528‑2668377 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggacATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGTGGCTGACCACCTGTCACAGAAACGGGTTGCCGCGGGTGAAAAGCCACTGC  >  NC_002947/2668425‑2668569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.