New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2668377 =48 (0.760)3 (0.050) 3/256 NT 5.4% coding (229/1485 nt) prpD 2‑methylcitrate dehydratase
?NC_002947 2668425 = 59 (0.970)coding (277/1485 nt) prpD 2‑methylcitrate dehydratase

GTCGATTCCCGCGAGGCCCTGGACACCGCGCGCAACTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGTGGCTGA  >  NC_002947/2668233‑2668525
                                                                                                                                                 |                                                                                                                                                    
gcagtggcttttcacccgcggcaacccgtttctgtgacaggtggtcagccactgccaggatgccgccaaggttgtccgagggatgagcccattcggcggccagccaggtgtcgttgtagtccagccagcgcaccgtgcagccaatGTcc                                                                                                                                                   <  4:207010‑M1/4‑1 (MQ=255)
    aTTCCCGCGAGGCCCTGGACACCGCGCGCAACTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCgg                                                                                                                                               >  6:115195/1‑148 (MQ=255)
         cgcgAGGCCCTGGACACCGCGCGCAACTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCAcctc                                                                                                                                         >  2:334811/1‑149 (MQ=255)
           cgAGGCCCTGGACACCGCGCGCAACTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCAcctcct                                                                                                                                       <  1:164823/149‑1 (MQ=255)
                cccTGGACACCGCGCGCAACTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGc                                                                                                                                  <  3:69207/149‑1 (MQ=255)
                 ccTGGACACCGCGCGCAACTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTc                                                                                                                                                    <  1:192884/130‑1 (MQ=255)
                 ccTGGACACCGCGCGCAACTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTc                                                                                                                                                    >  2:192884/1‑130 (MQ=255)
                  cTGGACACCGCGCGCAACTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCt                                                                                                                                >  3:327558/1‑149 (MQ=255)
                        acCGCGCGCAACTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGAccc                                                                                                                          >  3:91552/1‑149 (MQ=255)
                               gcAACTGCCTGATGGACACACTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAg                                                                                                                   <  3:22129/149‑1 (MQ=255)
                                 aaCTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGc                                                                                                                 >  1:94950/1‑149 (MQ=255)
                                 aaCTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGc                                                                                                                 >  8:64182/1‑149 (MQ=255)
                                      ccTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTTGACCGGGTCGAGGcgata                                                                                                             <  5:115195/148‑5 (MQ=255)
                                      ccTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGc                                                                                                              <  1:368978/147‑1 (MQ=255)
                                      aggtggtcagccactgccaggatgccgccaaggttgtccgagggatgagcccattcggcggccagccaggtgtcgttgtagtccagccagcgcaccgtgcagccaatGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGcc                                                                                                             >  6:119465‑M1/108‑149 (MQ=255)
                                           gtcagccactgccaggatgccgccaaggttgtccgagggatgagcccattcggcggccagccaggtgtcgttgtagtccagccagcgcaccgtgcagccaatGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTggg                                                                                                         >  5:254992‑M1/103‑148 (MQ=255)
                                            ggACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACa                                                                                                      >  5:344600/1‑149 (MQ=255)
                                              agccactgccaggatgacgccaaggttgtccgaggtatgagcccattcggcggccagccaggtgtcgttgtagtccagccagcgcaccgtgcagccaatGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACAt                                                                                                     >  6:395064‑M1/100‑149 (MQ=255)
                                                  ccTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCt                                                                                                >  4:142096/1‑149 (MQ=255)
                                                    tCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCAGGGACATTGGCTg                                                                                               >  5:52198/1‑148 (MQ=255)
                                                          gCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGt                                                                                         <  4:327558/148‑1 (MQ=255)
                                                              ccTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCgct                                                                                    >  7:135548/1‑149 (MQ=255)
                                                                ttCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCgctgg                                                                                  >  4:164843/1‑149 (MQ=255)
                                                                  ctcGCCTTCCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCgctgg                                                                                  <  8:135548/147‑1 (MQ=255)
                                                                        ttGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGTCCCGGTCAAGTCTGACTGGGACATTGGCTGCACGGTGCGCTGGATTGACTa                                                                          >  6:300539/1‑149 (MQ=255)
                                                                        ttGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTa                                                                          >  4:389647/1‑149 (MQ=255)
                                                                            gcTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAAc                                                                      <  4:91552/149‑1 (MQ=255)
                                                                             cTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAAc                                                                      >  8:210513/1‑148 (MQ=255)
                                                                             cTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACg                                                                     >  5:138669/1‑149 (MQ=255)
                                                                             cTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACg                                                                     >  7:84530/1‑149 (MQ=255)
                                                                                     aGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACct                                                               <  3:142096/147‑1 (MQ=255)
                                                                                          aCCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACAcc                                                                <  1:264900/141‑1 (MQ=255)
                                                                                          aCCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACAcc                                                                >  2:264900/1‑141 (MQ=255)
                                                                                            cAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGgccg                                                      >  4:147219/1‑149 (MQ=255)
                                                                                                   cTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGa                                                                             <  1:50510/119‑1 (MQ=255)
                                                                                                   cTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGa                                                                             >  2:50510/1‑119 (MQ=255)
                                                                                                   cTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATg                                               >  3:137712/1‑149 (MQ=255)
                                                                                                      ggCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATggg                                             <  1:1985/148‑1 (MQ=255)
                                                                                                       gCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGc                                            <  6:344600/148‑1 (MQ=255)
                                                                                                          cccAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGCCTACAACGACACCTGGCTGGCCGCCGAATGGGCTCAt                                        >  5:221369/1‑149 (MQ=255)
                                                                                                          cccAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGAACCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGATGGCCGCCGATTGGGATCAt                                        >  3:158648/1‑149 (MQ=255)
                                                                                                             aGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGTCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATc                                       >  1:251330/1‑148 (MQ=255)
                                                                                                              ggTGGAAGGCACGCTGGTCCCGAATGGTCCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCt                                    >  1:220912/1‑149 (MQ=255)
                                                                                                                 ggAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCg                                  >  5:162859/1‑148 (MQ=255)
                                                                                                                  gAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGa                                >  7:281439/1‑149 (MQ=255)
                                                                                                                  gAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGa                                >  3:114586/1‑149 (MQ=255)
                                                                                                                        aCGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCt                          >  5:47341/1‑149 (MQ=255)
                                                                                                                          gCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTg                        >  8:246694/1‑149 (MQ=255)
                                                                                                                              gTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTggc                      <  8:84530/147‑1 (MQ=255)
                                                                                                                              gTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTggc                      <  3:389647/147‑1 (MQ=255)
                                                                                                                               tCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTggcgg                    >  3:54431/1‑148 (MQ=255)
                                                                                                                                 ccGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCa                  <  7:64182/148‑1 (MQ=255)
                                                                                                                                   gAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATcc               >  3:207010/1‑149 (MQ=255)
                                                                                                                                      tGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTgg            <  3:147219/149‑1 (MQ=255)
                                                                                                                                           cTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGt        <  2:220912/148‑1 (MQ=255)
                                                                                                                                              gcgTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGTGGCt    <  4:137712/149‑1 (MQ=255)
                                                                                                                                              gcgTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGTGGCt    >  3:59185/1‑149 (MQ=255)
                                                                                                                                                 GTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGTGGCTGa  <  1:339259‑M1/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
GTCGATTCCCGCGAGGCCCTGGACACCGCGCGCAACTGCCTGATGGACACCCTCGGTTGCGGCCTTCTCGCCTTGCGCTTCCCTGAGTGCACCAAGCTCCTTGGCCCCCAGGTGGAAGGCACGCTGGTCCCGAATGGTGCTCGCGTCCCCGGCACCTCCTATCGCCTCGACCCGGTCAAGGCTGCCTGGGACATTGGCTGCACGGTGCGCTGGCTGGACTACAACGACACCTGGCTGGCCGCCGAATGGGCTCATCCCTCGGACAACCTTGGCGGCATCCTGGCAGTGGCTGA  >  NC_002947/2668233‑2668525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.