New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 295362039 (0.610)5 (0.080) 4/254 NT 11.3% coding (878/1383 nt) PP_2586 putative amino acid transporter
?NC_002947 = 2953671 41 (0.680)coding (827/1383 nt) PP_2586 putative amino acid transporter

CGCGCTTTTTCGTCACCAACTGGCCGAATGCCCGTGGCAATGCGCCGTCGCGGCCCATGGCGAACAGTACGCGCGACACGCTGGCCTGGGACACCATGGCCGAGGCGAAGCAGCCCGCCACGTAGGTAGCGGTGAAGGCGGTTACCAGCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2953468‑2953620
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagctTCGCCGATCCGGATTCGGCGTCGGTTGACGTGATGCGCCGGGTGGGCGGCGAGCTGCTGGTAACCGCCTTCACCGCTACCTACGTGGCGGGCTGCTTCGCCTCGGCCATGGTGTCCCAGGCCAGCGTGTCGCGCGTACTGTTCGCCA  <  NC_002947/2953671‑2953525
                                                                                                                                                                                                                                                                                                            
CGCGCTTTTTCGTCACCAACTGGCCGAATGCCCGTGGCAATGCGCCGTCGCGGCCCATGGCGAACAGTACGCGCGACACGCTGGCCTGGGACACCATGGCCGAGGCGAAGCAGCCCGCCACGTAGGTAGCGGTGAAGGCGGTTACCAGC                                                                                                                                                         <  8:123381/149‑1
 GCGCTTTTTCGTCACCAACTGGCCGAATGCCCGTGGCAATGCGCCGTCGCGGCCCATGGCGAACAGTACGCGCGCCACGCTGGCCTGGGACACCATGGCCGAGGCGAAGCAGCCCGCCACGTAGGTAGCGGTGAAGGCGGTTACCAGCA                                                                                                                                                        >  5:104416/1‑149
  CGCTTTTTCGTCACCAACTGGCCGAATGCCCGTGGCAATGCGCCGTCGCGGCCCATGGCGAACAGTACGCGCGACACGCTGGCCTGGGACACCATGGCCGAGGCGAAGCAGCCCGCCACGTAGGTAGCGGTGAAGGCGGTTACCAGCAG                                                                                                                                                       >  4:169793/1‑149
              ACCAACTGGCCGAATGCCCGTGGCAATGCGCCGTCGCGGCCCATGGCGAACAGTACGCGCGACACGCTGGCCTGGGACACCATGGCCGAGGCGAAGCAGCCCGACACGTAGGTAGCGGTGAAGGCGGTTACCAGCAGCTTCGCCGATCC                                                                                                                                           >  8:196537/1‑149
                                             CGTCGCGGCCCATGGCGAACAGTACGCGCGACACGCTGGCCTGGGACACCATGGCCGAGGCGAAGCAGCCCGCCACGTAGGTAGCGGTGAAGGCGGTTACCAGCAGCTTCGCCGATCCGGATTCGGCGTCGGTTGACGTGATGCGCCGG                                                                                                            >  2:209312/1‑149
                                                             GAACAGTACGCGCGACACGCTGGCCTGGGACACCATGGCCGAGGCGAAGCAGCCCGCCACGTAGGTAGCGGTGAAGGCGGTTACCAGCAGCTTCGCCGATCCGGATTCGGCGTCGGTTGACGTGATGCGCCGGGTGGGCGGCGAGCTGC                                                                                            <  1:209312/149‑1
                                                             GAACAGTACGCGCGACACGCTGGCCTGGGACACCATGGCCGAGGCGAAGCAGCCCGCCACGTAGGTAGCGGTGAAGGCGGTTACCAGCAGCTTCGCCGATCCGGATTCGGCGTCGGTTGACGTGATGCGCCGGGTGGGCGGCGAGCTGC                                                                                            <  7:196537/149‑1
                                                               ACACTACGCGCGACACGCTGGCCTGGGACACCATGGCCGAGGCGAAGCAGCCCGCCACGTAGGTAGCGGTGAAGGCGGTTACCAGCAGCTTCGCCGATCCGGATTCGGCGTCGGTTGACGTGATGCGCCGGGTGGGCGGCGAGCTGCTG                                                                                          <  4:199120/149‑1
                                                                                                                                                       CTTCGCCGATCCGGATTCGGCGTCGGTTGACGTGATGCGCCGGGTGGGCGGCGAGCTGCTGGTAACCGCCTTCACCGCTACCTACGTGGCGGGCTGCTTCGCCTCGGCCATGGTGTCCCAGGCCAGCGTGTCGCGCGTACTGTTCGCCA  <  7:21064/149‑1
                                                                                                                                                                                                                                                                                                            
CGCGCTTTTTCGTCACCAACTGGCCGAATGCCCGTGGCAATGCGCCGTCGCGGCCCATGGCGAACAGTACGCGCGACACGCTGGCCTGGGACACCATGGCCGAGGCGAAGCAGCCCGCCACGTAGGTAGCGGTGAAGGCGGTTACCAGCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2953468‑2953620
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagctTCGCCGATCCGGATTCGGCGTCGGTTGACGTGATGCGCCGGGTGGGCGGCGAGCTGCTGGTAACCGCCTTCACCGCTACCTACGTGGCGGGCTGCTTCGCCTCGGCCATGGTGTCCCAGGCCAGCGTGTCGCGCGTACTGTTCGCCA  <  NC_002947/2953671‑2953525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.