New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3135380	40 (0.630)	4 (0.070)	4/254	NT	9.7%	coding (33/1335 nt)	PP_2752	hypothetical protein
	?	NC_002947	= 3135418	36 (0.590)					coding (71/1335 nt)	PP_2752	hypothetical protein

AGTCCGCCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3135227‑3135380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCCACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGC  <  NC_002947/3135418‑3135274                                                                                                                                                                                                                                                                                                                      AGTCCGCCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑G                                                                                                                                                        <  3:177837/149‑1                                                GCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCG                                                                                                         >  3:179386/1‑149                                                 CCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGG                                                                                                        <  4:179386/149‑1                                                  CAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTTGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGC                                                                                                       <  4:137411/149‑1                                                                 CCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTGGGCCGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACT                                                                                                 <  5:10869/149‑1                                                                                                                                                               CCGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCGACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGG   <  5:79523/149‑1                                                                                                                                                                CGCCACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCCACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGC  <  8:140648/149‑1                                                                                                                                                                                                                                                                                                                      AGTCCGCCGCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3135227‑3135380 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccACCGGCAGCGCGGCGTAGCTCGCGAGCGCCAGGCCGAAGGCGGCGATACTGCGTTTCAGGGTTGCATGCATGGTCTTTCTCCACAGCCGCCCGGCCCACGCGACGGTGGCCGGGCGTAGGTCATAGGGGTTTATTGCTCGTTGGC  <  NC_002947/3135418‑3135274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.