New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3135380	40 (0.630)	4 (0.070)	4/254	NT	9.7%	coding (33/1335 nt)	PP_2752	hypothetical protein
	?	NC_002947	= 3135418	36 (0.590)					coding (71/1335 nt)	PP_2752	hypothetical protein

GCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTAC  >  NC_002947/3135235‑3135525                                                                                                                                                           |                                                                                                                                                  gccTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTc                                                                                                                                                >  4:241764/1‑149 (MQ=255)  ccTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCg                                                                                                                                               <  3:344757/149‑1 (MQ=255)        cccAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTgg                                                                                                                                         >  8:70070/1‑149 (MQ=255)         ccAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGgc                                                                                                                                        >  4:39103/1‑149 (MQ=255)         ccAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGAGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGgc                                                                                                                                        >  2:344516/1‑149 (MQ=255)             gagaAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTc                                                                                                                                    <  3:28756/149‑1 (MQ=255)               gaAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTcgc                                                                                                                                  <  3:241764/149‑1 (MQ=255)                          ccccGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTAcgccg                                                                                                                       <  7:70070/149‑1 (MQ=255)                              gcgTGATTGCGCCAACGAGCAATAAACCCCGATGACCGACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGCAAGACCAGGCATGCACCCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCGTCGGCCTCGCGCTCGCGAGCTACGCCGCGCt                                                                                                                   >  6:354556/1‑149 (MQ=255)                                    ttGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGt                                                                                                             >  3:385588/1‑149 (MQ=255)                                        gcCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCaccggcagcgcggcgtagctcgcgagcgccaggccgaaggcg                                                                                                         >  3:179386‑M1/1‑107 (MQ=255)                                        gcCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcg                                                                                                         <  8:140648‑M2/149‑5 (MQ=255)                                         ccAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCaccggcagcgcggcgtagctcgcgagcgccaggccgaaggcgg                                                                                                        <  4:179386‑M1/149‑44 (MQ=255)                                         ccAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTCGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcgg                                                                                                        <  5:79523‑M2/149‑6 (MQ=255)                                          cAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTTGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCaccggcagcgcggcgtagctcgcgagcgccaggccgaaggcggc                                                                                                       <  4:137411‑M1/149‑45 (MQ=255)                                            aCGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGccc                                                                                                     <  4:313524/149‑1 (MQ=255)                                                 cAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAggcg                                                                                                <  2:136847/149‑1 (MQ=255)                                                       aCCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAAt                                                                                          <  5:51013/149‑1 (MQ=255)                                                         cccTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTGGGCCGCCaccggcagcgcggcgtagctcgcgagcgccaggccgaaggcggcgatact                                                                                                 <  5:10869‑M1/149‑51 (MQ=255)                                                          ccTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGaa                                                                                       <  7:131952/149‑1 (MQ=255)                                                            tATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAAc                                                                                      >  5:31787/1‑148 (MQ=255)                                                                  cttcGCCCGTCCACCGTCGCGTGTGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCTGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGATACGCCGCGCTGCCGGTTGCGGCCCAGGCGGCCAATGAACActtctt                                                                               <  7:356735/146‑1 (MQ=255)                                                                  cTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAggca                                                                                                >  6:187965/1‑131 (MQ=255)                                                                  cTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAggca                                                                                                <  5:187965/132‑2 (MQ=255)                                                                  cTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAAttctt                                                                               >  7:294260/1‑149 (MQ=255)                                                                        ccGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGc                                                                          >  4:223583/1‑148 (MQ=255)                                                                            ccACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGcc                                                                     <  6:31787/149‑1 (MQ=255)                                                                                cGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGAGGCCAATGAACAATTCTTCCCGCTAGCCAcc                                                                  >  7:268260/1‑148 (MQ=255)                                                                                   cgcgTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTAcc                                                              <  8:16809/149‑1 (MQ=255)                                                                                     cgggggCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCTAATGAACAATTCTTCCCGCTAGCCACCTACCGa                                                            <  7:140648/146‑1 (MQ=255)                                                                                     cgTGGGCCGAGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGa                                                            <  1:344516/149‑1 (MQ=255)                                                                                           ccGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGt                                                      <  8:294260/149‑1 (MQ=255)                                                                                            cGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTg                                                     <  4:385588/149‑1 (MQ=255)                                                                                                    tgtgGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGt                                                                                                             >  1:83566/1‑85 (MQ=255)                                                                                                    tgtgGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGt                                                                                                             <  2:83566/85‑1 (MQ=255)                                                                                                    tgtgGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGcc                                             >  6:212126/1‑149 (MQ=255)                                                                                                          gaAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCGAGGCGGCCAATGAACAATTCTTCGCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGc                                       <  6:79523/149‑1 (MQ=255)                                                                                                           aaaGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCg                                      >  6:18742/1‑149 (MQ=255)                                                                                                                ccATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCAtt                                 >  3:13123/1‑149 (MQ=255)                                                                                                                      atgcaACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGgtg                           >  2:25208/1‑149 (MQ=255)                                                                                                                             ccTGCATCGCCGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGGGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCTCCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCg                    <  5:354556/149‑1 (MQ=255)                                                                                                                              cTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTAt                                                <  4:33413/120‑1 (MQ=255)                                                                                                                               tGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCgg                   >  7:232116/1‑148 (MQ=255)                                                                                                                                ccaaCGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGCCCTGGCGCGCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGGCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGga                 <  8:259742/147‑1 (MQ=255)                                                                                                                                   aCGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGgatga              >  3:32998/1‑149 (MQ=255)                                                                                                                                      cAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATc            >  7:35298/1‑148 (MQ=255)                                                                                                                                       aGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcggcccaggcggcgatactgcgtttcagggttgcatgcatggtctttctccacagccgcccggcccacgcgacggtggccgggcgtaggtcataggg          <  5:10869‑M2/149‑100 (MQ=255)                                                                                                                                        gTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGAt         >  4:369663/1‑149 (MQ=255)                                                                                                                                           tC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGAttac      <  5:18742/149‑1 (MQ=255)                                                                                                                                                      gccgccTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcggcgatactgcgtttcagggttgcatgcatggtctttctcaacagccgcccggcccacgcgacggtggccgggcgtaggtcataggggtttattgctcgttg    <  4:137411‑M2/149‑106 (MQ=255)                                                                                                                                                       ccgccaccggcagcgcggcgtagctcgcgagcgccaggccgaaggcggcgatactgcgtttcagggttgcatgcatggtctttctccacagccgcccggccgacgcgacggtggccgggcgtaggtcataggggtttattgctcgttgg   <  5:79523‑M1/149‑145 (MQ=255)                                                                                                                                                       ccgccTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcggcgatactgcgtttcagggttgcatgcatggtctttctccacagccgcccggcccacgcgacggtggccgggcgtaggtcataggggtttattgctcgttgg   <  4:179386‑M2/149‑107 (MQ=255)                                                                                                                                                        cgccaccggcagcgcggcgtagctcgcgagcgccaggccgaaggcggcgatactgcgtttcagggttgcatgcatggtctttctccacagccgcccggcccacgcgacggtggccgggcgtaggtcataggggtttattgctcgttggc  <  8:140648‑M1/149‑146 (MQ=255)                                                                                                                                                        cgccTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcggcgatactgcgtttcagggttgcatgcatggtctttctccacagccgcccggcccacgcgacggtggccgggcgtaggtcataggggtttattgctcgttggc  >  3:179386‑M2/1‑42 (MQ=255)                                                                                                                                                           |                                                                                                                                                  GCCTATGCCCAGGAGAAGGGCATCACCCCGCGTGATTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATC‑‑‑‑‑‑‑‑‑GCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTAC  >  NC_002947/3135235‑3135525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.