New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3135380	40 (0.630)	4 (0.070)	4/254	NT	9.7%	coding (33/1335 nt)	PP_2752	hypothetical protein
	?	NC_002947	= 3135418	36 (0.590)					coding (71/1335 nt)	PP_2752	hypothetical protein

TTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTACGCTACATCAACGAAGTCGAAGGCGGCATCAATGGCGTC  >  NC_002947/3135270‑3135563                                                                                                                                                     |                                                                                                                                                  ttGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGt                                                                                                                                                   >  3:385588/1‑149 (MQ=255)     gcCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcg                                                                                                                                               <  8:140648‑M2/149‑5 (MQ=255)      ccAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTCGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcgg                                                                                                                                              <  5:79523‑M2/149‑6 (MQ=255)         aCGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGccc                                                                                                                                           <  4:313524/149‑1 (MQ=255)              cAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAggcg                                                                                                                                      <  2:136847/149‑1 (MQ=255)                    aCCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAAt                                                                                                                                <  5:51013/149‑1 (MQ=255)                       ccTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGaa                                                                                                                             <  7:131952/149‑1 (MQ=255)                         tATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAAc                                                                                                                            >  5:31787/1‑148 (MQ=255)                               cttcGCCCGTCCACCGTCGCGTGTGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCTGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGATACGCCGCGCTGCCGGTTGCGGCCCAGGCGGCCAATGAACActtctt                                                                                                                     <  7:356735/146‑1 (MQ=255)                               cTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAggca                                                                                                                                      >  6:187965/1‑131 (MQ=255)                               cTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAggca                                                                                                                                      <  5:187965/132‑2 (MQ=255)                               cTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAAttctt                                                                                                                     >  7:294260/1‑149 (MQ=255)                                     ccGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGc                                                                                                                >  4:223583/1‑148 (MQ=255)                                         ccACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGcc                                                                                                           <  6:31787/149‑1 (MQ=255)                                             cGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGAGGCCAATGAACAATTCTTCCCGCTAGCCAcc                                                                                                        >  7:268260/1‑148 (MQ=255)                                                cgcgTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTAcc                                                                                                    <  8:16809/149‑1 (MQ=255)                                                  cgggggCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCTAATGAACAATTCTTCCCGCTAGCCACCTACCGa                                                                                                  <  7:140648/146‑1 (MQ=255)                                                  cgTGGGCCGAGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGa                                                                                                  <  1:344516/149‑1 (MQ=255)                                                        ccGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGt                                                                                            <  8:294260/149‑1 (MQ=255)                                                         cGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTg                                                                                           <  4:385588/149‑1 (MQ=255)                                                                 tgtgGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGt                                                                                                                                                   >  1:83566/1‑85 (MQ=255)                                                                 tgtgGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGt                                                                                                                                                   <  2:83566/85‑1 (MQ=255)                                                                 tgtgGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGcc                                                                                   >  6:212126/1‑149 (MQ=255)                                                                       gaAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCGAGGCGGCCAATGAACAATTCTTCGCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGc                                                                             <  6:79523/149‑1 (MQ=255)                                                                        aaaGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCg                                                                            >  6:18742/1‑149 (MQ=255)                                                                             ccATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCAtt                                                                       >  3:13123/1‑149 (MQ=255)                                                                                   atgcaACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGgtg                                                                 >  2:25208/1‑149 (MQ=255)                                                                                          ccTGCATCGCCGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGGGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCTCCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCg                                                          <  5:354556/149‑1 (MQ=255)                                                                                           cTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTAt                                                                                      <  4:33413/120‑1 (MQ=255)                                                                                            tGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCgg                                                         >  7:232116/1‑148 (MQ=255)                                                                                             ccaaCGCAGTATCGCCGCCTTCGCCCTGGCGCGCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGGCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGga                                                       <  8:259742/147‑1 (MQ=255)                                                                                                aCGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGgatga                                                    >  3:32998/1‑149 (MQ=255)                                                                                                   cAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATc                                                  >  7:35298/1‑148 (MQ=255)                                                                                                    aGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcggcccaggcggcgatactgcgtttcagggttgcatgcatggtctttctccacagccgcccggcccacgcgacggtggccgggcgtaggtcataggg                                                <  5:10869‑M2/149‑100 (MQ=255)                                                                                                     gTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGAt                                               >  4:369663/1‑149 (MQ=255)                                                                                                        tCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGAttac                                            <  5:18742/149‑1 (MQ=255)                                                                                                          gccgccTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcggcgatactgcgtttcagggttgcatgcatggtctttctcaacagccgcccggcccacgcgacggtggccgggcgtaggtcataggggtttattgctcgttg                                          <  4:137411‑M2/149‑106 (MQ=255)                                                                                                           ccgccTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcggcgatactgcgtttcagggttgcatgcatggtctttctccacagccgcccggcccacgcgacggtggccgggcgtaggtcataggggtttattgctcgttgg                                         <  4:179386‑M2/149‑107 (MQ=255)                                                                                                            cgccTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTggcggcgatactgcgtttcagggttgcatgcatggtctttctccacagccgcccggcccacgcgacggtggccgggcgtaggtcataggggtttattgctcgttggc                                        >  3:179386‑M2/1‑42 (MQ=255)                                                                                                                       tGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTACGCTACATCAAc                             >  2:31673/1‑149 (MQ=255)                                                                                                                            cTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTAGCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTACGCTACATCAACGAAGt                        <  1:126485/149‑1 (MQ=255)                                                                                                                                       cgccgcGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTACGCTACATCAACGAAGTCGAAggcggc              <  3:39103/148‑1 (MQ=255)                                                                                                                                        gccgcGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTACGCTACATCAACGAAGTCGAAGGCGGCAt            <  8:232116/149‑1 (MQ=255)                                                                                                                                          cgcgCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTACGCTACATCAACGAAGTCGAAGGCGGCATc           >  2:138676/1‑148 (MQ=255)                                                                                                                                             gcTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTACGCTACATCAACGAAGTCGAAGGCGGCATCAATg       <  3:223583/149‑1 (MQ=255)                                                                                                                                             gcTGCCGCTGGCCGCCCAGGCGGCCAATGCACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATACCGGTGTGGGCCGGGATGATCGATTACTTACGCTACATCAAAGAATACGAAGTCGGCATCAATg       >  2:331045/1‑149 (MQ=255)                                                                                                                                                    gTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTACGCTACATCAACGAAGTCGAAGGCGGCATCAATGGCGTc  >  6:9910/1‑147 (MQ=255)                                                                                                                                                     |                                                                                                                                                  TTGCGCCAACGAGCAATAAACCCCTATGACCTACGCCCGGCCACCGTCGCGTGGGCCGGGCGGCTGTGGAGAAAGACCATGCATGCAACCCTGAAACGCAGTATCGCCGCCTTCGGCCTGGCGCTCGCGAGCTACGCCGCGCTGCCGGTGGCGGCCCAGGCGGCCAATGAACAATTCTTCCCGCTAGCCACCTACCGAGTCGGTGCCTATGCCTCCAGCGGCATTCCGGTGTGGGCCGGGATGATCGATTACTTACGCTACATCAACGAAGTCGAAGGCGGCATCAATGGCGTC  >  NC_002947/3135270‑3135563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.