| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3387133 | 43 (0.680) | 3 (0.050) | 3/252 | NT | 7.0% | coding (977/1017 nt) | PP_2988 | alcohol dehydrogenase |
| ? | NC_002947 | = 3387150 | 39 (0.650) | coding (994/1017 nt) | PP_2988 | alcohol dehydrogenase | |||||
CGGAATGTCCAATACTCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3386985‑3387133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accttgcCCTTGGAGCGCCCTTGAGCAAGGTACTCAAGCGCACCCTTTGCGTCCTCGAACGGAAATACCCGGTCGATCACCGGCTGAATTTGCTGGGCGTCCAGAAGCTTGCCGATTTCGGCGAGTTGGGCACCGTCGGGCTGCACGAAAAGAAA < NC_002947/3387150‑3387003 aGGAATGTCCAATAGTGGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCGCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGC < 4:253524/148‑1 AGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCCCTTGGAGCGCCCTTGAGCAAGGTACTCAAG < 3:163170/149‑1 CCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCCCTTGGAGCGCCCTTGAGCAAGGT > 3:346742/1‑96 CCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCCCTTGGAGCGCCCTTGAGCAAGGT < 4:346742/96‑1 CCCTTGGAGCGCCCTTGAGCAAGGTACTCAAGCGCACCCTTTGCGTCCTCGAACGGAAATACCCGGTCGATCACCGGCTGAATTTGCTGGGCGTCCAGAAGCTTGCCGATTTCGGCGAGTTGGGCACCGTCGGGCTGCACGAAAAGAAA < 2:338403/149‑1 CGGAATGTCCAATACTCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3386985‑3387133‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accttgcCCTTGGAGCGCCCTTGAGCAAGGTACTCAAGCGCACCCTTTGCGTCCTCGAACGGAAATACCCGGTCGATCACCGGCTGAATTTGCTGGGCGTCCAGAAGCTTGCCGATTTCGGCGAGTTGGGCACCGTCGGGCTGCACGAAAAGAAA < NC_002947/3387150‑3387003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |