New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 338713343 (0.680)3 (0.050) 3/252 NT 7.0% coding (977/1017 nt) PP_2988 alcohol dehydrogenase
?NC_002947 = 3387150 39 (0.650)coding (994/1017 nt) PP_2988 alcohol dehydrogenase

CGGAATGTCCAATACTCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACG  >  NC_002947/3386985‑3387280
                                                                                                                                                    |                                                                                                                                                    
aggaATGTCCAATAGTGGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCGCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGC                                                                                                                                                      <  4:253524‑M1/148‑1 (MQ=255)
 ggAATGTCCAATACTCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCt                                                                                                                                                     >  3:390493/1‑149 (MQ=255)
       tCCAATACTCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAgg                                                                                                                                                <  8:215309/148‑1 (MQ=255)
       tCCAATACTCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAgg                                                                                                                                                <  7:18109/148‑1 (MQ=255)
         cAATACTCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGgcg                                                                                                                                             <  3:188803/149‑1 (MQ=255)
              cTCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCaa                                                                                                                                                  >  1:131252/1‑139 (MQ=255)
              cTCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCaa                                                                                                                                                  <  2:131252/139‑1 (MQ=255)
               tCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCaa                                                                                                                                                  >  4:388572/1‑138 (MQ=255)
               tCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCaa                                                                                                                                                  <  3:388572/138‑1 (MQ=255)
                 gTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTc                                                                                                                                                    >  4:166768/1‑134 (MQ=255)
                 gTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTc                                                                                                                                                    <  3:166768/134‑1 (MQ=255)
                 gTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAgg                                                                                                                                     <  7:11748/149‑1 (MQ=255)
                 gTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAg                                                                                                                                      <  6:302539/148‑1 (MQ=255)
                  tttCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGg                                                                                                                                    <  2:338403‑M2/149‑2 (MQ=255)
                          cGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTc                                                                                                                             <  4:390493/148‑1 (MQ=255)
                           gTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGgcgc                                                                                                                                            >  2:86098/1‑132 (MQ=255)
                           gTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGgcgc                                                                                                                                            <  1:86098/132‑1 (MQ=255)
                           gTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCg                                                                                                                            <  5:80882/148‑1 (MQ=255)
                             gCATCCCGACGGTGCCCAACTCGACGAAATCGGCAAGCTTCTGGACGCCCATCAAATTCAGCCGGTGATCGACCGTGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTa                                                                                                                          <  4:229423/148‑1 (MQ=255)
                             gCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTaa                                                                                                                         >  7:15899/1‑149 (MQ=255)
                              cAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCAAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAAt                                                                                                                        >  6:267603/1‑149 (MQ=255)
                               aGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCccttggagcgcccttgagcaaggtactcaag                                                                                                                       <  3:163170‑M1/149‑32 (MQ=255)
                                  ccGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAg                                                                                                                    <  2:31736/149‑1 (MQ=255)
                                           cccAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACt                                                                                                            <  1:221286/148‑1 (MQ=255)
                                            ccAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTgc                                                                                                          >  2:188245/1‑149 (MQ=255)
                                                ctctcagAAATCGGCAAGCGTCTGGACGCCCATCAAATTCAGCCGGTGATCGACCGGGTATTTGCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTgccgcc                                                                                                      <  5:290418/143‑1 (MQ=255)
                                                   gCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTa                                                                                                   <  1:188245/149‑1 (MQ=255)
                                                     cGAAATCGGCCAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCTAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTAtt                                                                                                 >  6:90221/1‑149 (MQ=255)
                                                        aaTCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTtc                                                                                              <  1:338403/148‑1 (MQ=255)
                                                           cGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTca                                                                                           >  2:24679/1‑148 (MQ=255)
                                                             gCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTcaca                                                                                         >  3:318732/1‑148 (MQ=255)
                                                                      tGGACGCCCAGCAAATTCAGCCGGTGATCGACCTGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGGCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGa                                                                               <  7:228592/149‑1 (MQ=255)
                                                                           gCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGAAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATa                                                                           >  4:96781/1‑148 (MQ=255)
                                                                            cccAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGAAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATaaa                                                                         <  3:96781/149‑1 (MQ=255)
                                                                             ccAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCccttggagcgcccttgagcaaggt                                                                                                                              <  4:346742‑M1/96‑25 (MQ=255)
                                                                             ccAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCccttggagcgcccttgagcaaggt                                                                                                                              >  3:346742‑M1/1‑72 (MQ=255)
                                                                              cAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAgg                                                                       >  5:122351/1‑149 (MQ=255)
                                                                                gCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGTCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTCTCTCACACAACCATCGACATAAAGGt                                                                      <  1:5144/149‑1 (MQ=255)
                                                                                       cAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTcc                                                               <  3:332189/148‑1 (MQ=255)
                                                                                        aGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCAt                                                             >  2:348098/1‑149 (MQ=255)
                                                                                         gCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATg                                                            >  1:174428/1‑149 (MQ=255)
                                                                                              tGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACcac                                                       <  1:348098/149‑1 (MQ=255)
                                                                                                   gACCGGGTATTTCCGTGCGAGGACGCACAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTc                                                  <  6:389108/149‑1 (MQ=255)
                                                                                                     ccGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTcc                                                 >  3:333111/1‑148 (MQ=255)
                                                                                                        ggTATTTCGGTTCTATGACGCAATGGGTGCGCTTGAGTACCTTGCTCAAGGGCTCTCCAAGGGGAAGGTCg                                                                                                                            <  6:71555/71‑1 (MQ=255)
                                                                                                        ggTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGAcc                                             >  7:363085/1‑149 (MQ=255)
                                                                                                            tttCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTa                                          <  5:267603/148‑1 (MQ=255)
                                                                                                              tCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCAGTATTTCTCACACAACCATAGACATAAAGGTACCTTCCATGACCACACGTCCGAGCGTACt                                        >  6:44639/1‑148 (MQ=255)
                                                                                                                cGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCAt                                     <  8:15899/149‑1 (MQ=255)
                                                                                                                  ttCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCAtt                                    >  3:35773/1‑148 (MQ=255)
                                                                                                                  ttCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCAtt                                    <  4:35773/148‑1 (MQ=255)
                                                                                                                  ttCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCATTa                                   >  6:358306/1‑149 (MQ=255)
                                                                                                                            cAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTc                         <  6:122351/149‑1 (MQ=255)
                                                                                                                              aaGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCa                       <  4:333111/149‑1 (MQ=255)
                                                                                                                                       cTTGAGTACCTTGCTCAAGGGCGCTCCAAGGgcaaggtactcaagcgcaccctttgcgtcctcgaacggaaatacccggtcgatcaccggctgaatttgctgggcgtccagaagcttgccgatttcggcgagttgggcaccgtcgggct               <  3:163170‑M2/149‑119 (MQ=255)
                                                                                                                                        ttGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTgg             >  4:325452/1‑149 (MQ=255)
                                                                                                                                              aCCTTGCTCAAGGGCGCTCCAAGGgcaaggtactcaagcgcaccctttgcgtcctcgaacggaaatacccggtcgatcaccggctgaatttgctgg                                                             <  4:346742‑M2/96‑73 (MQ=255)
                                                                                                                                              aCCTTGCTCAAGGGCGCTCCAAGGgcaaggtactcaagcgcaccctttgcgtcctcgaacggaaatacccggtcgatcaccggctgaatttgctgg                                                             >  3:346742‑M2/1‑24 (MQ=255)
                                                                                                                                                cTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCAcc      >  1:359179/1‑148 (MQ=255)
                                                                                                                                                cTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCAcc      >  4:309951/1‑148 (MQ=255)
                                                                                                                                                cTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACAACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCAcc      >  7:6841/1‑148 (MQ=255)
                                                                                                                                                 ttGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTa    >  2:79602/1‑149 (MQ=255)
                                                                                                                                                    cccttggagcgcccttgagcaaggtactcaagcgcaccctttgcgtcctcgaacggaaatacccggtcgatcaccggctgaatttgctgggcgtccagaagcttgccgatttcggcgagttgggcaccgtcgggctgcacgaaaagaaa  <  2:338403‑M1/149‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CGGAATGTCCAATACTCGTTTCTTTTCGTGCAGCCCGACGGTGCCCAACTCGCCGAAATCGGCAAGCTTCTGGACGCCCAGCAAATTCAGCCGGTGATCGACCGGGTATTTCCGTTCGAGGACGCAAAGGGTGCGCTTGAGTACCTTGCTCAAGGGCGCTCCAAGGGCAAGGTCGTAATCAAGATGTGACTGCCGCCGTATTTCTCACACAACCATCGACATAAAGGTAACTTCCATGACCACACGTCCGACCGTACTCATTACTGGCGCCTCCAGCGGCATTGGCGCCACCTACG  >  NC_002947/3386985‑3387280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.