| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3475318 | 56 (0.880) | 3 (0.050) | 3/252 | NT | 5.4% | coding (1395/2517 nt) | PP_3087 | excinuclease ABC subunit A |
| ? | NC_002947 | = 3475352 | 52 (0.860) | coding (1361/2517 nt) | PP_3087 | excinuclease ABC subunit A | |||||
CGGAAATGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3475165‑3475318‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcgAACACGGCGGCACCATCCTCTACAGCGGGCCGCCCGCCGGCCTGGCCGAGGTGCAACAGTCATGCACCCGCACCTACCTGTTCGATGC‑CCCGGTACAGGCCACACGCGCCCCCCGCCAGGCCCGCGACTGGCTGAAGCTTGAAGGCAT < NC_002947/3475352‑3475205 CGGAAATGCGGCGCTGAGGTTATCGATGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGC < 7:4622/149‑1 GCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGAACACGGCGGCGCCATCCTCTACAGCGGGCCGCCCGCCGGCCTGG > 1:193230/1‑149 CTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGAACACGGCGGCGCCATCCTCTACAGCGGGCCGCCCGCCGGCCTGGC < 2:193230/149‑1 GGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGAACCCGGCGGCACCATCCTCTACAGCGGGCCCCCCGCCGGCCc > 2:295860/1‑125 CCGGCGAACACGGCGGCACCATCCTCTACAGCGGGCCGCCCGCCGGCCTGGCCGAGGTGCAACAGTCATGCACCCGCACCTACCTGTTCGATGC‑CCCGGTACAGGCCACACGCGCCCCCCGCCAGGCCCGCGACTGGCTGAAGCTTGAA < 7:240854/149‑1 CGGCGAACACGGCGGCACCATCCTCTACAGCGGGCCGCCCGCCGGCCTGGCCGATGTGCAACAGTCATGCACCCGCACCTACCTGTTCGATGC‑CCCGGTACAGGCCACACGCGCCCCCCGCCAGGCCCGCGACTGGCTGAAGCTTGAAG < 3:166559/149‑1 CGGCGAACACGGCGGCACCATCCTCTACAGCGGGCCGCCCGCCGGCCTGGCCGAGGTGCAACAGTCATGCACCCGCACCTACCTGTTCGATGC‑CCCGGTACAGGCCACACGCGCCCCCCGCCAGGCCCGCGACTGGCTGAAGCTTGAAG < 2:77019/149‑1 GGCGAACACGGCGGCACCATCCTCTACAGCGGGCCGCCCGCCGGCCTGGCCGAGGTGCAACAGTCATGCACCCGCACCTACCTGTTCGATGC‑CCCGGTACAGGCCACACGCGCCCCCCGCCAGGCCCGCGACTGGCTGAAGCTTGAA < 5:94528/147‑1 GGCGAACACGGCGGCACCATCCTCTACAGCGGGCCGCCCGCCGGCCTGGCCGAGGTGCAACAGTCATGCACCCGCACCTACCTGTTCGATGC‑CCCGGTACAGGCCACACGCGCCCCCCGCCAGGCCCGCGACTGGCTGAAGCTTGAA > 6:94528/1‑147 CGAACACGGCGGCACCATCCTCTACAGCGGGCCGCCCGCCGGCCTGGCCGAGGGGCAACAGTCATGCACCCGCACCTACCTGTTCGATGCACCCGGTACAGGCCACACGCGCCCCCCGCCAGGCCCGCGACTGGCTGAAGCTTGAAGGC < 1:112101/149‑1 GAACACGGCGGCACCATCCTCTACAGCGGGCCGCCCGCCGGCCTGGCCGAGGTGCAACAGTCATGCACCCGCACCTACCTGTTCGATGC‑CCCGGTACAGGCCACACGCGCCCCCCGCCAGGCCCGCGACTGGCTGAAGCTTGAAGGCAT > 1:94568/1‑149 CGGAAATGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGCGCGTGTGGCCTGTACCGGGGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3475165‑3475318‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcgAACACGGCGGCACCATCCTCTACAGCGGGCCGCCCGCCGGCCTGGCCGAGGTGCAACAGTCATGCACCCGCACCTACCTGTTCGATGC‑CCCGGTACAGGCCACACGCGCCCCCCGCCAGGCCCGCGACTGGCTGAAGCTTGAAGGCAT < NC_002947/3475352‑3475205 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |