New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3475318	56 (0.880)	3 (0.050)	3/252	NT	5.4%	coding (1395/2517 nt)	PP_3087	excinuclease ABC subunit A
	?	NC_002947	= 3475352	52 (0.860)					coding (1361/2517 nt)	PP_3087	excinuclease ABC subunit A

TGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGA  >  NC_002947/3475171‑3475466                                                                                                                                                      |                                                                                                                                                     tGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCcggcgg                                                                                                                                                     <  2:237836/149‑1 (MQ=255)         tCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGCGGGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGccc                                                                                                                                              >  3:218679/1‑149 (MQ=255)            ggTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTg                                                                                                                                          <  2:377328/149‑1 (MQ=255)                aTCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTa                                                                                                                                        >  2:351000/1‑147 (MQ=255)                 tCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTagag                                                                                                                                     <  1:313392/149‑1 (MQ=255)                 tCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTaga                                                                                                                                      <  8:109727/148‑1 (MQ=255)                   gAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAgg                                                                                                                                    <  8:266907/148‑1 (MQ=255)                   gAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGa                                                                                                                                   <  6:114085/149‑1 (MQ=255)                     ggTTCTTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATg                                                                                                                                 <  8:255966/149‑1 (MQ=255)                         aTTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTg                                                                                                                              <  8:204705/148‑1 (MQ=255)                           tGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTgccg                                                                                                                           >  4:301312/1‑149 (MQ=255)                             cgcgTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTgccgcc                                                                                                                         >  7:282559/1‑149 (MQ=255)                               cgTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCgt                                                                                                                       <  6:23348/149‑1 (MQ=255)                                 tGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCgtgt                                                                                                                     <  8:240763/149‑1 (MQ=255)                                  gATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGtt                                                                                                                    >  6:297742/1‑149 (MQ=255)                                   aTGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTc                                                                                                                   >  1:94568‑M2/1‑148 (MQ=255)                                     gCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGGTGCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCCCCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTcg                                                                                                                  <  1:112101‑M2/149‑3 (MQ=255)                                       cTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTcgccg                                                                                                               <  2:77019‑M2/149‑6 (MQ=255)                                       cTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACATCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTcgccg                                                                                                               <  3:166559‑M2/149‑6 (MQ=255)                                        ttCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTcgccgg                                                                                                              <  7:240854‑M2/149‑7 (MQ=255)                                        ttCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTcgcc                                                                                                                >  6:94528‑M2/1‑143 (MQ=255)                                        ttCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTcgcc                                                                                                                <  5:94528‑M2/147‑5 (MQ=255)                                            aGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGc                                                                                                          <  8:90620/149‑1 (MQ=255)                                             gCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGaacacggcggcgccatcctctacagcgggccgcccgccggcctgg                                                                                                         >  1:193230‑M1/1‑104 (MQ=255)                                              cTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGaacacggcggcgccatcctctacagcgggccgcccgccggcctggc                                                                                                        <  2:193230‑M1/149‑47 (MQ=255)                                               ccccgCCAGGCCCGCGACTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCggg                                                                                                       >  6:216246/5‑149 (MQ=255)                                                  aGCCAGTCGCGGGCCTGGCGGGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGc                                                                                                      <  4:218679/148‑1 (MQ=255)                                                  aGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGccc                                                                                                    <  6:393693/149‑1 (MQ=255)                                                   gCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCAGTAGAGGATGGTGCCGCCGTCTTCGCCGGCAGCGGGccc                                                                                                    >  7:137686/1‑148 (MQ=255)                                                   gCCAGGCCCGCGACTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACATGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGccc                                                                                                    >  2:78138/1‑148 (MQ=255)                                                    ccAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTa                                                                                                  >  6:268289/1‑149 (MQ=255)                                                    ccAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTa                                                                                                  >  4:99873/1‑149 (MQ=255)                                                     cAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCGTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTa                                                                                                  >  8:6197/1‑148 (MQ=255)                                                     cAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTAc                                                                                                 <  5:210634/149‑1 (MQ=255)                                                      aGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACa                                                                                                >  4:337534/1‑149 (MQ=255)                                                         cgcgGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATcc                                                                                             <  5:268289/149‑1 (MQ=255)                                                          gcgGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATcc                                                                                             <  8:240854/148‑1 (MQ=255)                                                                cTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTag                                                                                                                                       <  2:100042/100‑1 (MQ=255)                                                                cTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTag                                                                                                                                       >  1:100042/1‑100 (MQ=255)                                                                  ggC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGaacccggcggcaccatcctctacagcgggccccccgccggccc                                                                                                           >  2:295860‑M1/1‑83 (MQ=255)                                                                   gC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGAGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCgt                                                                                                                       <  8:363207/113‑1 (MQ=255)                                                                   gC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGAGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCgt                                                                                                                       >  7:363207/1‑113 (MQ=255)                                                                    c‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTc                                                                                  <  3:301312/149‑1 (MQ=255)                                                                       gggggCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTcgg                                                                                >  6:327202/1‑149 (MQ=255)                                                                           gcgcGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACGGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTcggcgcg                                                                            >  1:293981/1‑149 (MQ=255)                                                                             gcgTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTcggcgcggc                                                                          >  6:86731/1‑149 (MQ=255)                                                                                      cTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGgtgt                                                                 >  4:254352/1‑149 (MQ=255)                                                                                      cTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGgtgt                                                                 >  6:109449/1‑149 (MQ=255)                                                                                      cTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGgtgt                                                                 >  3:4414/1‑149 (MQ=255)                                                                                      cTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGGAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGgtgt                                                                 >  5:327369/1‑149 (MQ=255)                                                                                         tACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTc                                                                >  5:298547/1‑147 (MQ=255)                                                                                           ccGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTTCATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAg                                                             <  1:77019/148‑1 (MQ=255)                                                                                           ccGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAgg                                                            >  5:351746/1‑149 (MQ=255)                                                                                             ggg‑gCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTc                                                          <  5:216246/149‑1 (MQ=255)                                                                                                  cATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGc                                                      <  6:351746/149‑1 (MQ=255)                                                                                                      gAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTcc                                                   <  1:351000/148‑1 (MQ=255)                                                                                                        accggtaggtGCGGGTGCATGACTGTGGCACAGGGGCCTGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACCTCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTccacc                                                <  8:137686/146‑1 (MQ=255)                                                                                                          aggtaggtGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCACCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCcaccac                                              >  3:315123/1‑149 (MQ=255)                                                                                                             taggtGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTa                                           <  4:166559/149‑1 (MQ=255)                                                                                                                  gCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACAcc                                       >  4:7137/1‑148 (MQ=255)                                                                                                                          aTGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGc                                >  5:156791/1‑147 (MQ=255)                                                                                                                              cTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTcca                                                  >  3:280103/1‑125 (MQ=255)                                                                                                                              cTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTcca                                                  <  4:280103/125‑1 (MQ=255)                                                                                                                                     aCCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCACCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAg                   <  4:315123/149‑1 (MQ=255)                                                                                                                                      ccTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCAGCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAgg                  <  4:4414/149‑1 (MQ=255)                                                                                                                                       cTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGgc                 <  3:99873/149‑1 (MQ=255)                                                                                                                                           gCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGCGCCGCCGTGTTcgccggcctggccgaggtgcaacagtcatgcacccgcacctacctgttcgatgccccggtacaggccacacgcgccccccgccaggcccgcgactggctgaag             <  2:193230‑M2/149‑104 (MQ=255)                                                                                                                                            ccAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGCGCCGCCGTGTTcgccggcctggccgaggtgcaacagtcatgcacccgcacctacctgttcgatgccccggtacaggccacacgcgccccccgccaggcccgcgactggctgaagc            >  1:193230‑M2/1‑45 (MQ=255)                                                                                                                                              gggcCGGCGGGGGGCCCGCTGTAGAGGATGGTGCCGCCGGGTTcgccggcctggccgaggtgcaacagtcatgcacccgcacctacctgttcgatgccccggtacaggccacacgcgccccccgcc                                 >  2:295860‑M2/2‑43 (MQ=255)                                                                                                                                                 ccGGCGaacacggcggcaccatcctctacagcgggccgcccgccggcctggccgaggtgcaacagtcatgcacccgcacctacctgttcgatgccccggtacaggccacacgcgccccccgccaggcccgcgactggctgaagcttgaa       <  7:240854‑M1/149‑144 (MQ=255)                                                                                                                                                 ccGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGc       <  5:297742/149‑1 (MQ=255)                                                                                                                                                  cggcggGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCt      >  7:23540/1‑149 (MQ=255)                                                                                                                                                  cGGCGaacacggcggcaccatcctctacagcgggccgcccgccggcctggccgatgtgcaacagtcatgcacccgcacctacctgttcgatgccccggtacaggccacacgcgccccccgccaggcccgcgactggctgaagcttgaag      <  3:166559‑M1/149‑145 (MQ=255)                                                                                                                                                  cGGCGaacacggcggcaccatcctctacagcgggccgcccgccggcctggccgaggtgcaacagtcatgcacccgcacctacctgttcgatgccccggtacaggccacacgcgccccccgccaggcccgcgactggctgaagcttgaag      <  2:77019‑M1/149‑145 (MQ=255)                                                                                                                                                   ggcgggcgGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGgcgc               >  3:366448/1‑139 (MQ=255)                                                                                                                                                   ggcgggcgGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGgcgc               <  4:366448/139‑1 (MQ=255)                                                                                                                                                   ggcgggcgGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCtt     >  8:191106/1‑149 (MQ=255)                                                                                                                                                   ggCGaacacggcggcaccatcctctacagcgggccgcccgccggcctggccgaggtgcaacagtcatgcacccgcacctacctgttcgatgccccggtacaggccacacgcgccccccgccaggcccgcgactggctgaagcttgaa       >  6:94528‑M1/1‑4 (MQ=255)                                                                                                                                                   ggCGaacacggcggcaccatcctctacagcgggccgcccgccggcctggccgaggtgcaacagtcatgcacccgcacctacctgttcgatgccccggtacaggccacacgcgccccccgccaggcccgcgactggctgaagcttgaa       <  5:94528‑M1/147‑144 (MQ=255)                                                                                                                                                     cGaacacggcggcaccatcctctacagcgggccgcccgccggcctggccgaggggcaacagtcatgcacccgcacctacctgttcgatgcacccggtacaggccacacgcgccccccgccaggcccgcgactggctgaagcttgaaggc   <  1:112101‑M1/149‑148 (MQ=255)                                                                                                                                                      gaacacggcggcaccatcctctacagcgggccgcccgccggcctggccgaggtgcaacagtcatgcacccgcacctacctgttcgatgccccggtacaggccacacgcgccccccgccaggcccgcgactggctgaagcttgaaggcat  >  1:94568‑M1/1‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     TGCGGCGCTCAGGTTATCGAGGTTATTGCGCGTGATGCCTTCAAGCTTCAGCCAGTCGCGGGCCTGGC‑GGGGGGCGCGTGTGGCCTGTACCGGG‑GCATCGAACAGGTAGGTGCGGGTGCATGACTGTTGCACCTCGGCCAGGCCGGCGGGCGGCCCGCTGTAGAGGATGGTGCCGCCGTGTTCGCCGGCAGCGGGCCCTACATCCACCAGCCAGTCGGCGCGGCGCATGGTGTCCAGGTCATGCTCCACCACGTACACCGAGTTGCCAGCCTGTTTCAGGCGCTGCAGGGCTTCGA  >  NC_002947/3475171‑3475466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.