| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3548538 = | 54 (0.850) | 3 (0.050) | 3/252 | NT | 6.3% | coding (61/195 nt) | PP_5588 | hypothetical protein |
| ? | NC_002947 | 3548597 = | 38 (0.630) | coding (120/195 nt) | PP_5588 | hypothetical protein | |||||
CTGCTCAAAGTCCTTGATCATGCTGACGCGTTCCGAAAGTAACGGGACGGCAATACCCAACCGTTGATTACCACGAACCCGGGCTTTTCGACCGTCTTGCCCGCAACGGCCGCCGAGGCGCCGAACACCGCGCCCCCCGCGCCGAGCAAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3548689‑3548538‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagacGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCCGGCGG > NC_002947/3548597‑3548744 CTGCTCAAAGTCCTTGATCATGCTGACGCGTTCCGAAAGTAACGGGACGGCAATACCCAACCGTTGATTACCACGAACCCGGGCTTTTCGACCGTCTTGCCCGCAACGGCCGCCGAGGCGCCGAACACCGCGCCCCCCGCGCCGAGCAA < 8:347071/149‑1CTGCTCAAAGTCCTTGATCATGCTGACGCGTTCCGAAAGTAACGGGACGGCAATACCCAACCGTTGATTACCACGAACCCGGGCTTTTCGACCGTCTTGCCCGCAACGGCCGCCGAGGCGCCGAACACCGCGCCCCCCGCGCCGAGC < 3:29200/147‑1 TGCTCAAAGTCCTTGATCATGCTGACGCGTTCCGAAAGTAACGGGACGGCAATACCCAACCGTTGATTACCACGAACCCGGGCTTTTCGACCGTCTTGCCCGCAACGGCCGCCGAGGCGCCGAACACCGCGCCCCCCGCGCCGAGC > 8:47065/1‑146 CTCAAAGTCCTTGATCATGCTGACGCGTTCCGAAAGTAACGGGACGGCAATACCCAACCGTTGATTACCACGAACCCGGGCTTTTCGACCGTCTTGCCCGCAACGGCCGCCGAGGCGCCGAACACCGCGCCCCCCGCGCCGAGCAAGA < 7:155130/148‑1 CTTTTCGACCGTCTTGCCCGCAACGGCCGCCGAGGCGCCGAACACCGCGCCCCCCGCGCCGAGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATC > 6:386680/1‑147 ACCGTCTTGCCCGCAACGGCCGCCGAGGCGCCGAACACCGCGCCCCCCGCGCCGAGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTT > 3:187605/1‑149 CGTCTTGCCCGCAACGGCCGCCGAGGCGCCGAACACCGCGCCCCCCGCGCCGAGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGA < 4:187605/149‑1 GCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCC > 5:253902/1‑149 AAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCCG > 8:252892/1‑149 GACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCCGGC > 2:180453/1‑149 GACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCCGGC < 5:386680/149‑1 GACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCCGGC > 7:28387/1‑149 GACGGTCGAAAAGCCCGGGTGCGTGGTAATCAACGGGTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCCGGC < 4:258492/149‑1 CGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCCGGCGG < 7:199765/149‑1 CTGCTCAAAGTCCTTGATCATGCTGACGCGTTCCGAAAGTAACGGGACGGCAATACCCAACCGTTGATTACCACGAACCCGGGCTTTTCGACCGTCTTGCCCGCAACGGCCGCCGAGGCGCCGAACACCGCGCCCCCCGCGCCGAGCAAGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3548689‑3548538‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagacGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCCGGCGG > NC_002947/3548597‑3548744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |