New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3548538 =54 (0.850)3 (0.050) 3/252 NT 6.3% coding (61/195 nt) PP_5588 hypothetical protein
?NC_002947 3548597 = 38 (0.630)coding (120/195 nt) PP_5588 hypothetical protein

GCTGTGCGGGGCACTGTTGACGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTT  >  NC_002947/3548390‑3548683
                                                                                                                                                    |                                                                                                                                                 
ccgccgggccggccccgatgatgcagaaatcatagtgatcgcgcagcgccttctgctgctcaaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccg                                                                                                                                                   <  7:199765‑M1/1‑1 (MQ=255)
  gccgggccggccccgatgatgcagaaatcatagtgatcgcgcagcgccttctgctgctcaaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccacccgttgattaccacgcacccgggcttttcgaccGTc                                                                                                                                                 <  4:258492‑M1/3‑1 (MQ=255)
  gccgggccggccccgatgatgcagaaatcatagtgatcgcgcagcgccttctgctgctcaaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTc                                                                                                                                                 >  7:28387‑M1/147‑149 (MQ=255)
  gccgggccggccccgatgatgcagaaatcatagtgatcgcgcagcgccttctgctgctcaaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTc                                                                                                                                                 <  5:386680‑M1/3‑1 (MQ=255)
  gccgggccggccccgatgatgcagaaatcatagtgatcgcgcagcgccttctgctgctcaaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTc                                                                                                                                                 >  2:180453‑M1/147‑149 (MQ=255)
   gtgCGGGGCACTGTTGACGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCt                                                                                                                                                >  5:17043/1‑149 (MQ=255)
    tgCGGGGCACTGTTGACGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTc                                                                                                                                                 <  6:322530/147‑1 (MQ=255)
    cgggccggccccgatgatgcagaaatcatagtgatcgcgcagcgccttctgctgctcaaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTCtt                                                                                                                                               >  8:252892‑M1/145‑149 (MQ=255)
      ggccggccccgatgatgcagaaatcatagtgatcgcgcagcgccttctgctgctcaaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTCTTGc                                                                                                                                             >  5:253902‑M1/143‑149 (MQ=255)
      cGGGGCACTGTTGACGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGc                                                                                                                                             >  3:85901/1‑149 (MQ=255)
         ggCACTGTTGACGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCg                                                                                                                                          <  6:387522/149‑1 (MQ=255)
           cACTGTTGACGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGgc                                                                                                                                        >  5:308124/1‑149 (MQ=255)
              tGTTGACGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGcgcg                                                                                                                                     >  6:346159/1‑149 (MQ=255)
              tGTTGACGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGcgcg                                                                                                                                     >  2:69119/1‑149 (MQ=255)
               gTTCACGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCgg                                                                                                                                    <  6:316369/149‑1 (MQ=255)
                   aCGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCgggggg                                                                                                                                >  2:101546/1‑149 (MQ=255)
                     ggCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATCGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGAAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGgcg                                                                                                                              <  5:159958/149‑1 (MQ=255)
                       ccTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGcgcg                                                                                                                            <  5:18423/149‑1 (MQ=255)
                       ccTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCGCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGcgcg                                                                                                                            <  1:69119/149‑1 (MQ=255)
                        cTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCggggg                                                                                                                                 >  6:204910/1‑143 (MQ=255)
                        cTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCggggg                                                                                                                                 <  5:204910/143‑1 (MQ=255)
                          ttttCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGgtg                                                                                                                         >  1:115653/1‑149 (MQ=255)
                              cAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTc                                                                                                                      <  5:398261/148‑1 (MQ=255)
                                  tGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGgcgc                                                                                                                 >  7:254295/1‑149 (MQ=255)
                                    gCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGcc                                                                                                                <  6:308124/148‑1 (MQ=255)
                                    gCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCt                                                                                                               <  2:91608/149‑1 (MQ=255)
                                     cTGTAGCGCAGTTTGCCGGGTGTAACTTTCAGGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTGGGCGCCTc                                                                                                              <  4:162958/149‑1 (MQ=255)
                                      tGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTcg                                                                                                             >  6:331505/1‑149 (MQ=255)
                                                  tGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGc                                                                                                  <  5:190779/148‑1 (MQ=255)
                                                  tGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGAGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGc                                                                                                  <  6:17043/148‑1 (MQ=255)
                                                     cGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGc                                                                                              <  2:115653/149‑1 (MQ=255)
                                                        gtgtAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGAACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGc                                                                                              >  6:281239/1‑146 (MQ=255)
                                                         tgtAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCTCTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGa                                                                                          <  7:183810/149‑1 (MQ=255)
                                                         tgtAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGa                                                                                          <  5:346159/149‑1 (MQ=255)
                                                           tcaaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACg                                                                                        <  4:187605‑M1/60‑1 (MQ=255)
                                                            aaCTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACg                                                                                        <  6:34877/148‑1 (MQ=255)
                                                             aaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGt                                                                                      >  3:187605‑M1/88‑149 (MQ=255)
                                                              cTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTAGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTc                                                                                     <  8:260668/149‑1 (MQ=255)
                                                               tttCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTc                                                                                     >  2:303315/1‑148 (MQ=255)
                                                                      gatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAg                                                                               >  6:386680‑M1/79‑147 (MQ=255)
                                                                           aGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGt                                                                        >  8:72575/1‑149 (MQ=255)
                                                                              tCACGGGAACATGGGGAAGCTCACTTTTTGAACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCg                                                                     <  5:281239/149‑1 (MQ=255)
                                                                                  gggAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGTGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGt                                                                 <  3:129244/149‑1 (MQ=255)
                                                                                     aaCATGGGGAAGCTCACTTTTTGTACTGCGCAGTTCGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCCGGTTCGTGGTaa                                                               >  5:265278/1‑148 (MQ=255)
                                                                                          ggggAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGt                                                                        >  6:139144/1‑134 (MQ=255)
                                                                                          ggggAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGt                                                                        <  5:139144/134‑1 (MQ=255)
                                                                                             gAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCTGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGtt                                                      <  1:101546/149‑1 (MQ=255)
                                                                                             gAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGtt                                                      >  8:86451/1‑149 (MQ=255)
                                                                                               aGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTgg                                                    <  2:226456/149‑1 (MQ=255)
                                                                                                  tCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTa                                                 >  7:47065/1‑149 (MQ=255)
                                                                                                            tACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTcc                                        <  7:86451/148‑1 (MQ=255)
                                                                                                              cTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGt                                          <  4:233078/144‑1 (MQ=255)
                                                                                                              cTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGt                                          >  3:233078/1‑144 (MQ=255)
                                                                                                               tGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGt                                     >  3:258492/1‑148 (MQ=255)
                                                                                                                 cgcAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGtt                                    <  8:254295/147‑1 (MQ=255)
                                                                                                                    aGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACttt                               >  4:211976/1‑149 (MQ=255)
                                                                                                                      ttGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGGTGGGTATTGCCGTCCCGTTACTTTCg                             >  3:226689/1‑149 (MQ=255)
                                                                                                                        ggggtgTAGTGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCgg                            <  6:265278/143‑1 (MQ=255)
                                                                                                                             gTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGt                     <  5:331505/149‑1 (MQ=255)
                                                                                                                                gagGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGt                     >  5:381134/1‑147 (MQ=255)
                                                                                                                                           cAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCaa         <  7:72575/148‑1 (MQ=255)
                                                                                                                                           cAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAg        >  7:346812/1‑149 (MQ=255)
                                                                                                                                           cAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAg        >  7:307231/1‑149 (MQ=255)
                                                                                                                                            agagCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAg        >  2:309932/1‑148 (MQ=255)
                                                                                                                                            agagCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATAAACGGTTGGGTATTGCCGTACCGTTACTTTCGCAACGCGTCAGCATGATCAAg        >  4:299329/1‑148 (MQ=255)
                                                                                                                                             gagCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGa      <  1:303315/149‑1 (MQ=255)
                                                                                                                                                 tgtgTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACttt  <  3:211976/149‑1 (MQ=255)
                                                                                                                                                  gtgtCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACttt  >  8:115683/1‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GCTGTGCGGGGCACTGTTGACGGCCTTTTTCAACTGGCTGTAGCGCAGTTTGCCGGGTGTAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTT  >  NC_002947/3548390‑3548683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.