New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3548538 =	54 (0.850)	3 (0.050)	3/252	NT	6.3%	coding (61/195 nt)	PP_5588	hypothetical protein
	?	NC_002947	3548597 =	38 (0.630)					coding (120/195 nt)	PP_5588	hypothetical protein

TAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCCGGCGG  >  NC_002947/3548449‑3548744                                                                                                                                                     |                                                                                                                                                     tcaaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACg                                                                                                                                                      <  4:187605‑M1/60‑1 (MQ=255)  aaCTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACg                                                                                                                                                      <  6:34877/148‑1 (MQ=255)   aaagtccttgatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑Gt                                                                                                                                                   >  3:187605‑M1/88‑149 (MQ=255)    cTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTAGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTc                                                                                                                                                  <  8:260668/149‑1 (MQ=255)     tttCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTc                                                                                                                                                  >  2:303315/1‑148 (MQ=255)            gatcatgctgacgcgttccgaaagtaacgggacggcaatacccaaccgttgattaccacgaacccgggcttttcgaccGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAg                                                                                                                                            >  6:386680‑M1/79‑147 (MQ=255)                 aGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGt                                                                                                                                     >  8:72575/1‑149 (MQ=255)                    tCACGGGAACATGGGGAAGCTCACTTTTTGAACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCg                                                                                                                                  <  5:281239/149‑1 (MQ=255)                        gggAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGTGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGt                                                                                                                              <  3:129244/149‑1 (MQ=255)                           aaCATGGGGAAGCTCACTTTTTGTACTGCGCAGTTCGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCCGGTTCGTGGTaa                                                                                                                            >  5:265278/1‑148 (MQ=255)                                ggggAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGt                                                                                                                                     >  6:139144/1‑134 (MQ=255)                                ggggAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGt                                                                                                                                     <  5:139144/134‑1 (MQ=255)                                   gAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCTGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGtt                                                                                                                   <  1:101546/149‑1 (MQ=255)                                   gAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGtt                                                                                                                   >  8:86451/1‑149 (MQ=255)                                     aGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTgg                                                                                                                 <  2:226456/149‑1 (MQ=255)                                        tCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTa                                                                                                              >  7:47065/1‑149 (MQ=255)                                                  tACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTcc                                                                                                     <  7:86451/148‑1 (MQ=255)                                                    cTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGt                                                                                                       >  3:233078/1‑144 (MQ=255)                                                    cTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGt                                                                                                       <  4:233078/144‑1 (MQ=255)                                                     tGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGt                                                                                                  >  3:258492/1‑148 (MQ=255)                                                       cgcAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGtt                                                                                                 <  8:254295/147‑1 (MQ=255)                                                          aGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACttt                                                                                            >  4:211976/1‑149 (MQ=255)                                                            ttGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGGTGGGTATTGCCGTCCCGTTACTTTCg                                                                                          >  3:226689/1‑149 (MQ=255)                                                              ggggtgTAGTGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCgg                                                                                         <  6:265278/143‑1 (MQ=255)                                                                   gTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCG‑AAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGt                                                                                  <  5:331505/149‑1 (MQ=255)                                                                      gagGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGt                                                                                  >  5:381134/1‑147 (MQ=255)                                                                                cttttcgaccgtcttgcccgcaacggccgccgaggcgccgaacaccgcgccccccgcgccgagcaagacG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATc                                                                        >  6:386680‑M2/70‑147 (MQ=255)                                                                                 cAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCaa                                                                      <  7:72575/148‑1 (MQ=255)                                                                                 cAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAg                                                                     >  7:307231/1‑149 (MQ=255)                                                                                 cAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAg                                                                     >  7:346812/1‑149 (MQ=255)                                                                                  agagCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAg                                                                     >  2:309932/1‑148 (MQ=255)                                                                                  agagCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATAAACGGTTGGGTATTGCCGTACCGTTACTTTCGCAACGCGTCAGCATGATCAAg                                                                     >  4:299329/1‑148 (MQ=255)                                                                                   gagCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGa                                                                   <  1:303315/149‑1 (MQ=255)                                                                                       tgtgTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACttt                                                               <  3:211976/149‑1 (MQ=255)                                                                                       accgtcttgcccgcaacggccgccgaggcgccgaacaccgcgccccccgcgccgagcaagacG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACttt                                                               >  3:187605‑M2/63‑149 (MQ=255)                                                                                        gtgtCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACttt                                                               >  8:115683/1‑148 (MQ=255)                                                                                         cgtcttgcccgcaacggccgccgaggcgccgaacaccgcgccccccgcgccgagcaagacG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGa                                                             <  4:187605‑M2/89‑1 (MQ=255)                                                                                           TCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGag                                                            <  7:155130‑M1/148‑1 (MQ=255)                                                                                             TTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGagcag                                                         <  8:347071‑M1/149‑1 (MQ=255)                                                                                               GCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGagcag                                                         <  3:29200‑M1/147‑1 (MQ=255)                                                                                               GCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGagca                                                          >  8:47065‑M1/1‑146 (MQ=255)                                                                                                 tCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGcagcag                                                      >  8:199765/1‑148 (MQ=255)                                                                                                 tCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGcagcag                                                      >  1:170085/1‑148 (MQ=255)                                                                                                  cGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGcagcag                                                      >  1:349502/1‑147 (MQ=255)                                                                                                            ggCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTgcgc                                          <  2:170085/149‑1 (MQ=255)                                                                                                                 ggTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACGTGTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGACCGCGTCACAATGATCAAGGACTTTGAGCAGCAGAAGGCGGTGCGCGAt                                       >  1:268328/1‑148 (MQ=255)                                                                                                                      tCGGCGCCTCGGCGGCCGTTGCGTGAAAGACG‑GTCGAAAAGCCGGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCTTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTAt                                 <  7:133404/148‑1 (MQ=255)                                                                                                                        ggCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAACGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGAt                              <  7:347071/149‑1 (MQ=255)                                                                                                                        ggCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGAt                              >  4:51601/1‑149 (MQ=255)                                                                                                                           gcCTAGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTc                           >  4:158071/1‑149 (MQ=255)                                                                                                                                ggcggcCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGc                        <  7:115683/147‑1 (MQ=255)                                                                                                                                        gtGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGCTAATCAACGGTTGGGTATTGCCGTCCCGTTAGTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTTCGCGATCACTATGATTTCTGCATCATCgggg              >  3:79703/2‑149 (MQ=255)                                                                                                                                              gcaagacG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGggccggcc        >  5:253902‑M2/8‑149 (MQ=255)                                                                                                                                                aagacG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGccggcccg      >  8:252892‑M2/6‑149 (MQ=255)                                                                                                                                                  gacG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGccggcccggc    >  7:28387‑M2/4‑149 (MQ=255)                                                                                                                                                  gacG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGccggcccggc    >  2:180453‑M2/4‑149 (MQ=255)                                                                                                                                                  gacG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGccggcccggc    <  5:386680‑M2/146‑1 (MQ=255)                                                                                                                                                  gacG‑GTCGAAAAGCCCGGGTGCGTGGTAATCAACGGGTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGccggcccggc    <  4:258492‑M2/146‑1 (MQ=255)                                                                                                                                                    cG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCcggcgg  <  7:199765‑M2/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TAACTTTCATGGCTACAGGTCACGGGAACATGGGGAAGCTCACTTTTTGTACTGCGCAGTTGGGTCGTAGAGGCTTTCTCCAGAGCTGTGTCTTGCTCGGCGCGGGGGGCGCGGTGTTCGGCGCCTCGGCGGCCGTTGCGGGCAAGACG‑GTCGAAAAGCCCGGGTTCGTGGTAATCAACGGTTGGGTATTGCCGTCCCGTTACTTTCGGAACGCGTCAGCATGATCAAGGACTTTGAGCAGCAGAAGGCGCTGCGCGATCACTATGATTTCTGCATCATCGGGGCCGGCCCGGCGG  >  NC_002947/3548449‑3548744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.