| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4710018 = | 48 (0.760) | 5 (0.080) | 4/260 | NT | 9.8% | coding (118/459 nt) | sixA | phosphohistidine phosphatase SixA |
| ? | NC_002947 | 4710053 = | 45 (0.720) | coding (83/459 nt) | sixA | phosphohistidine phosphatase SixA | |||||
GCGCATCCGGTGCGTGACGAGGAACCCAAGCTGTGAAGCTGTGGGTGCTGCGCCACGGTGAAGCTGAGCCGCGGGCCAAGACGGATGCCGAGCGCCGGTTGACTGCCCATGGTCGCGAGCAGGTGCTGCACAGTGCGGCTTACCTGATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4710167‑4710018‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgCGACCATGGGCAGTCAACCGGCGCTCGGCATCCGTCTTGGCCCGCGGCTCAGCTTCACCGTGGCGCAGCACCCACAGCTTCACAGCTTGGGTTCCTCGTCACGCACCGGATGCGCGGCCGGTGCCACGGCGTGCGCTGCTTCACCT > NC_002947/4710053‑4710198 GCGCATCCGGTGCGTGACGAGGAACCCAAGCTGTGAAGCTGTGGGTGCTGCGCCACGGTGAAGCTGAGCCGCGGGCCAAGACGGATGCCGAGCGCCGGTTGACTGCCCATGGTCGCGAGCAGGTGCTGCACAGTGCGGCTTACCTGATC < 1:311512/149‑1GCGCATCCGGTGCGTGACGAGGAACCCAAGCTGTGAAGCTGTGGGTGCTGCGCCACGGTGAAGCTGAGCCGCGGGCCAAGACGGATGCCGAGCGCCGGTTGACTGCCCATGGTCGCGAGCAGGTGCTGCACAGTGCGGCTTACCTGATC < 3:365517/149‑1 GTCGCGAGCAGGTGCTGCACAGTGCGGCTTACCTGATCGCGACCATGGGCAGTCAACCGGCGCTCGGCATCCGTCTTGGCCCGCGGCTCAGCTTCACCGTGGCGCAGCCCCCACAGCTTCACAGCTTGGGTTCCTCGTCACGCACCGGA > 4:224386/1‑149 GAGCAGGTGCTGCACAGTGCGGCTTACCTGATCGCGACCATGGGCAGTCAACCGGCGCTCGGCATCCGTCTTGGCCCGCGGCTCAGCTTCACCGTGGCGCAGCACCCACAGCTTCACAGCTTGGGTTCCTCGTCACGCACCGG > 1:390872/1‑143 GAGCAGGTGCTGCACAGTGCGGCTTACCTGATCGCGACCATGGGCAGTCAACCGGCGCTCGGCATCCGTCTTGGCCCGCGGCTCAGCTTCACCGTGGCGCAGCACCCACAGCTTCACAGCTTGGGTTCCTCGTCACGCACCGG < 2:390872/143‑1 GAGCAGGTGCTGCACAGTGCGGCTTACCTGATCGCGACCATGGGCAGTCAACCGGCGCTCGGCATCCGTCTTGGCCCGCGGCTCAGCTTCACCGTGGCGCAGCACCCACAGCTTCACAGCTT < 5:51237/122‑1 GAGCAGGTGCTGCACAGTGCGGCTTACCTGATCGCGACCATGGGCAGTCAACCGGCGCTCGGCATCCGTCTTGGCCCGCGGCTCAGCTTCACCGTGGCGCAGCACCCACAGCTTCACAGCTT > 6:51237/1‑122 TCGCGACCATGGGCAGTCAACCGGCGCTCGGCATCCGTCTTGGCCCGCGGCTCAGCTTCACCGTGGCGCAGCACCCACAGCTTCACAGCTTGGGTTCCTCGTCACGCACCGGATGCGCGGCCGGTGCCACGGCGTGCGCTGCTTCACCT > 6:206591/1‑149 GCGCATCCGGTGCGTGACGAGGAACCCAAGCTGTGAAGCTGTGGGTGCTGCGCCACGGTGAAGCTGAGCCGCGGGCCAAGACGGATGCCGAGCGCCGGTTGACTGCCCATGGTCGCGAGCAGGTGCTGCACAGTGCGGCTTACCTGATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4710167‑4710018‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgCGACCATGGGCAGTCAACCGGCGCTCGGCATCCGTCTTGGCCCGCGGCTCAGCTTCACCGTGGCGCAGCACCCACAGCTTCACAGCTTGGGTTCCTCGTCACGCACCGGATGCGCGGCCGGTGCCACGGCGTGCGCTGCTTCACCT > NC_002947/4710053‑4710198 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |