New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3997287	45 (0.710)	3 (0.050)	3/252	NT	6.4%	intergenic (‑125/‑28)	PP_3525/PP_3526	hypothetical protein/AraC family transcriptional regulator
	?	NC_002947	= 3997310	45 (0.750)					intergenic (‑148/‑5)	PP_3525/PP_3526	hypothetical protein/AraC family transcriptional regulator

GGCATATCTCATCAGGCGCATCCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCT  >  NC_002947/3997142‑3997435                                                                                                                                                  |                                                                                                                                                     ggCATATCTCATCAGGCGCATCCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCgg                                                                                                                                                   <  5:156830/149‑1 (MQ=255)    atatCTCATCAGGCGCATCCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGgc                                                                                                                                                 >  6:364929/1‑148 (MQ=255)     tatCTCATCAGGCGCATCCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGgcca                                                                                                                                               <  5:52154/149‑1 (MQ=255)     tatCTCATCAGGCGCATCCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGgcca                                                                                                                                               <  3:256204/149‑1 (MQ=255)        ctcATCAGGCGCATCCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGgccagc                                                                                                                                             >  4:218715/1‑148 (MQ=255)           atcaGGCGCATCCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGgccagcca                                                                                                                                           <  5:388622/147‑1 (MQ=255)           atcaGGCGCATCCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGccagccag                                                                                                                                          >  1:194461/1‑148 (MQ=255)              aGGCGCATCCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGaa                                                                                                                                       <  3:218715/148‑1 (MQ=255)                   cATCCTCCATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGCACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAg                                                                                                                                 <  7:145752/149‑1 (MQ=255)                      ccTCACTGACGGGAGGTCAGCATACCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTATCCTCCGGGCACCGTCCACACTCTGCTGGCCAGCCAGGAAGCGGAGTTc                                                                                                                              >  4:195569‑M2/1‑148 (MQ=255)                       cTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTca                                                                                                                             >  7:105792‑M2/1‑147 (MQ=255)                        tCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGtt                                                                                                                               >  4:34750/1‑146 (MQ=255)                         cAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTcaga                                                                                                                           >  7:3518‑M2/1‑145 (MQ=255)                          aaTGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGGTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTcaga                                                                                                                           >  6:135346‑M2/1‑144 (MQ=255)                            tGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTcagagtg                                                                                                                        <  6:202363‑M2/149‑8 (MQ=255)                                gggAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGaactccgcttcctggctggcccgcagagtgtgga                                                                                                                    <  8:333263‑M1/149‑35 (MQ=255)                                     gTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTca                                                                                                                             <  8:318163‑M2/135‑3 (MQ=255)                                     gTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTca                                                                                                                             >  7:318163‑M2/1‑133 (MQ=255)                                     gTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCccacgcca                                                                                                               >  4:287104/1‑149 (MQ=255)                                          cATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCAGCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCcacgccacgc                                                                                                            >  2:161755/1‑147 (MQ=255)                                            tAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCTGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGt                                                                                                        >  5:151100/1‑149 (MQ=255)                                              gCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGt                                                                                                                                <  3:7095/123‑1 (MQ=255)                                              gCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGt                                                                                                                                >  4:7095/1‑123 (MQ=255)                                               cGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCa                                                                                                     <  2:194461/149‑1 (MQ=255)                                                 gTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGc                                                                                                   <  3:290267/149‑1 (MQ=255)                                                 gTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCAACGCCACGCCAGTTCAGc                                                                                                   >  8:221706/1‑149 (MQ=255)                                                     aGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGaactccgcttcctggctggcccgcagagtgt                                                                                                                       >  6:388402‑M1/1‑94 (MQ=255)                                                     aGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGaactccgcttcctggctggcccgcagagtgt                                                                                                                       <  5:388402‑M1/125‑32 (MQ=255)                                                          cAGGACAGGCTGGTTTGCCTGAACACTACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGacc                                                                                          <  5:143710/149‑1 (MQ=255)                                                          cAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGac                                                                                           >  7:152700/1‑148 (MQ=255)                                                          cAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGac                                                                                           >  2:135114/1‑148 (MQ=255)                                                                  gCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGcccagcaccag                                                                                  >  4:241996/1‑149 (MQ=255)                                                                    tGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGaccagcaccagc                                                                                 >  7:295258/1‑148 (MQ=255)                                                                         tGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGTCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACAt                                                                            <  5:202363/148‑1 (MQ=255)                                                                          gCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATg                                                                           >  7:94727/1‑148 (MQ=255)                                                                           ccTGAACACGACCTGTAATACGACACAGCGACCGGGGAGATTGTCTTTCCTCCTGGCACAGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCt                                                                         <  6:303715/149‑1 (MQ=255)                                                                                    gACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCa                                                                 >  6:136942/1‑148 (MQ=255)                                                                                    gACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCa                                                                 >  7:294824/1‑148 (MQ=255)                                                                                       cTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCaaaa                                                              >  3:114600/1‑148 (MQ=255)                                                                                       cTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCaaaa                                                              >  6:156496/1‑148 (MQ=255)                                                                                               cGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAgcggc                                                      <  5:156496/148‑1 (MQ=255)                                                                                                  cacaGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAAGATGCTACGGCTCAAAACAAGCGgcgc                                                    <  8:94727/147‑1 (MQ=255)                                                                                                    caGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAAt                                                <  8:295258/149‑1 (MQ=255)                                                                                                     aGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAACCAAGCGgcgc                                                    >  6:283527/1‑144 (MQ=255)                                                                                                     aGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGgcgc                                                    <  5:283527/144‑1 (MQ=255)                                                                                                       ccACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGcc                                             <  8:294824/149‑1 (MQ=255)                                                                                                        cACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGccc                                            <  5:40142/149‑1 (MQ=255)                                                                                                                  aTTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGcc                                     <  7:95476/146‑1 (MQ=255)                                                                                                                  aTTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGcc                                     >  8:95476/1‑146 (MQ=255)                                                                                                                   ttGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTAt                                 <  3:34750/149‑1 (MQ=255)                                                                                                                   ttGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTAt                                 >  8:231417/1‑149 (MQ=255)                                                                                                                    tGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATc                                >  1:308460/1‑149 (MQ=255)                                                                                                                                  gCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATc                  <  1:135114/149‑1 (MQ=255)                                                                                                                                   cACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATcc                 >  6:155198/1‑149 (MQ=255)                                                                                                                                       gTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCt             <  3:287104/149‑1 (MQ=255)                                                                                                                                        tCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgctttaccgctatgctgacctccc            <  8:333263‑M2/149‑116 (MQ=255)                                                                                                                                         ccACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTc            >  7:233024/1‑148 (MQ=255)                                                                                                                                           acacTCTGCGGGCCAGCCAGGAAGCGGAGTTcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgct                                 >  6:388402‑M2/1‑31 (MQ=255)                                                                                                                                           acacTCTGCGGGCCAGCCAGGAAGCGGAGTTcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgct                                 <  5:388402‑M2/125‑95 (MQ=255)                                                                                                                                            cacTCTGaactccgcttcctggctggcccgcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgctttaccgctatgctgacctcccgtca        <  6:202363‑M1/149‑143 (MQ=255)                                                                                                                                            cacTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGaa         >  4:343492/1‑148 (MQ=255)                                                                                                                                               tctGaactccgcttcctggctggcccgcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaacccagcctgtcctggtgctttaccgctatgctgacctcccgtcatt      >  6:135346‑M1/1‑4 (MQ=255)                                                                                                                                               tctGaactccgcttcctggctggcccgcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgctttaccgctatgctgacctcccgtcattg     >  7:3518‑M1/1‑4 (MQ=255)                                                                                                                                               tctGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACt     >  5:223364/1‑149 (MQ=255)                                                                                                                                                 tGaactccgcttcctggctggcccgcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgctttaccgctatgctgacctcccgtcattgag   >  7:105792‑M1/1‑2 (MQ=255)                                                                                                                                                 tGaactccgcttcctggctggcccgcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgctttaccgctatgctgac                 <  8:318163‑M1/135‑134 (MQ=255)                                                                                                                                                 tGaactccgcttcctggctggcccgcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgctttaccgctatgctgac                 >  7:318163‑M1/1‑2 (MQ=255)                                                                                                                                                 tGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATc                                >  4:218391/1‑120 (MQ=255)                                                                                                                                                 tGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATc                                <  3:218391/120‑1 (MQ=255)                                                                                                                                                 tGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTtc   >  8:92548/1‑149 (MQ=255)                                                                                                                                                  gaactccgcttcctggctggccagcagagtgtggacggtgcccggaggatagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgctttaccggtatgctgacctcccgtcagtgagg  >  4:195569‑M1/1‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GGCATATCTCATCAGGCGCATCCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCT  >  NC_002947/3997142‑3997435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.