New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3997287	45 (0.710)	3 (0.050)	3/252	NT	6.4%	intergenic (‑125/‑28)	PP_3525/PP_3526	hypothetical protein/AraC family transcriptional regulator
	?	NC_002947	= 3997310	45 (0.750)					intergenic (‑148/‑5)	PP_3525/PP_3526	hypothetical protein/AraC family transcriptional regulator

CCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCTCGATGGCCAGTTTCACGGTGGC  >  NC_002947/3997163‑3997457                                                                                                                                                    |                                                                                                                                                    ccTCACTGACGGGAGGTCAGCATACCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTATCCTCCGGGCACCGTCCACACTCTGCTGGCCAGCCAGGAAGCGGAGTTc                                                                                                                                                    >  4:195569‑M2/1‑148 (MQ=255)  cTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTca                                                                                                                                                   >  7:105792‑M2/1‑147 (MQ=255)   tCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGtt                                                                                                                                                     >  4:34750/1‑146 (MQ=255)    cAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTcaga                                                                                                                                                 >  7:3518‑M2/1‑145 (MQ=255)     aaTGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGGTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTcaga                                                                                                                                                 >  6:135346‑M2/1‑144 (MQ=255)       tGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTcagagtg                                                                                                                                              <  6:202363‑M2/149‑8 (MQ=255)                gTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTca                                                                                                                                                   <  8:318163‑M2/135‑3 (MQ=255)                gTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTca                                                                                                                                                   >  7:318163‑M2/1‑133 (MQ=255)                gTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCccacgcca                                                                                                                                     >  4:287104/1‑149 (MQ=255)                     cATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCAGCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCcacgccacgc                                                                                                                                  >  2:161755/1‑147 (MQ=255)                       tAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCTGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGt                                                                                                                              >  5:151100/1‑149 (MQ=255)                          cGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCa                                                                                                                           <  2:194461/149‑1 (MQ=255)                            gTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGc                                                                                                                         <  3:290267/149‑1 (MQ=255)                            gTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCAACGCCACGCCAGTTCAGc                                                                                                                         >  8:221706/1‑149 (MQ=255)                                     cAGGACAGGCTGGTTTGCCTGAACACTACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGacc                                                                                                                <  5:143710/149‑1 (MQ=255)                                     cAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGac                                                                                                                 >  7:152700/1‑148 (MQ=255)                                     cAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGac                                                                                                                 >  2:135114/1‑148 (MQ=255)                                             gCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGcccagcaccag                                                                                                        >  4:241996/1‑149 (MQ=255)                                               tGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGaccagcaccagc                                                                                                       >  7:295258/1‑148 (MQ=255)                                                    tGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGTCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACAt                                                                                                  <  5:202363/148‑1 (MQ=255)                                                     gCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATg                                                                                                 >  7:94727/1‑148 (MQ=255)                                                      ccTGAACACGACCTGTAATACGACACAGCGACCGGGGAGATTGTCTTTCCTCCTGGCACAGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCt                                                                                               <  6:303715/149‑1 (MQ=255)                                                               gACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCa                                                                                       >  6:136942/1‑148 (MQ=255)                                                               gACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCa                                                                                       >  7:294824/1‑148 (MQ=255)                                                                  cTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCaaaa                                                                                    >  3:114600/1‑148 (MQ=255)                                                                  cTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCaaaa                                                                                    >  6:156496/1‑148 (MQ=255)                                                                          cGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAgcggc                                                                            <  5:156496/148‑1 (MQ=255)                                                                             cacaGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAAGATGCTACGGCTCAAAACAAGCGgcgc                                                                          <  8:94727/147‑1 (MQ=255)                                                                               caGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAAt                                                                      <  8:295258/149‑1 (MQ=255)                                                                                aGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAACCAAGCGgcgc                                                                          >  6:283527/1‑144 (MQ=255)                                                                                aGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGgcgc                                                                          <  5:283527/144‑1 (MQ=255)                                                                                  ccACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGcc                                                                   <  8:294824/149‑1 (MQ=255)                                                                                   cACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGccc                                                                  <  5:40142/149‑1 (MQ=255)                                                                                             aTTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGcc                                                           >  8:95476/1‑146 (MQ=255)                                                                                             aTTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGcc                                                           <  7:95476/146‑1 (MQ=255)                                                                                              ttGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTAt                                                       >  8:231417/1‑149 (MQ=255)                                                                                              ttGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTAt                                                       <  3:34750/149‑1 (MQ=255)                                                                                               tGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATc                                                      >  1:308460/1‑149 (MQ=255)                                                                                                             gCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATc                                        <  1:135114/149‑1 (MQ=255)                                                                                                              cACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATcc                                       >  6:155198/1‑149 (MQ=255)                                                                                                                  gTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCt                                   <  3:287104/149‑1 (MQ=255)                                                                                                                   tCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgctttaccgctatgctgacctccc                                  <  8:333263‑M2/149‑116 (MQ=255)                                                                                                                    ccACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTc                                  >  7:233024/1‑148 (MQ=255)                                                                                                                      acacTCTGCGGGCCAGCCAGGAAGCGGAGTTcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgct                                                       >  6:388402‑M2/1‑31 (MQ=255)                                                                                                                      acacTCTGCGGGCCAGCCAGGAAGCGGAGTTcagagtgtggacggtgcccggaggaaagacaatctccccggtggctgtgtcgtattacaggtcgtgttcaggcaaaccagcctgtcctggtgct                                                       <  5:388402‑M2/125‑95 (MQ=255)                                                                                                                       cacTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGaa                               >  4:343492/1‑148 (MQ=255)                                                                                                                          tctGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACt                           >  5:223364/1‑149 (MQ=255)                                                                                                                            tGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATc                                                      >  4:218391/1‑120 (MQ=255)                                                                                                                            tGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATc                                                      <  3:218391/120‑1 (MQ=255)                                                                                                                            tGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTtc                         >  8:92548/1‑149 (MQ=255)                                                                                                                              cGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTtctc                       >  8:342817/1‑149 (MQ=255)                                                                                                                               gggCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCTCg                      <  3:241996/149‑1 (MQ=255)                                                                                                                                    agccagGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCTCGATGGc                 >  4:195813/1‑149 (MQ=255)                                                                                                                                      ccagGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCTCGATGGc                 >  8:49511/1‑147 (MQ=255)                                                                                                                                           aaGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCTCGATGGCCAGttt           >  5:43511/1‑148 (MQ=255)                                                                                                                                              cGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCTCGATGGCCAGTTTCACg       <  8:233024/149‑1 (MQ=255)                                                                                                                                                 aGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCTCGATGGCCAGTTTCACGGTg    <  7:221706/149‑1 (MQ=255)                                                                                                                                                  gTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCTCGATGGCCAGTTTCACGGTgg   <  4:114600/149‑1 (MQ=255)                                                                                                                                                   ttCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGCCCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACGTCATCCTGCTCGAACACTTCTCGATGGCCAGTTTCACGGTGGc  >  6:109632/1‑149 (MQ=255)                                                                                                                                                   ttCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCATCATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCTCGATGGCCAGTTTCACGGTGGc  >  1:99025/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CCTCAATGACGGGAGGTCAGCATAGCGGTAAAGCACCAGGACAGGCTGGTTTGCCTGAACACGACCTGTAATACGACACAGCCACCGGGGAGATTGTCTTTCCTCCGGGCACCGTCCACACTCTGCGGGCCAGCCAGGAAGCGGAGTTCAGAGTGCCCACGCCACGCCAGTTCAGCCAAAAGACCAGCACCAGCAACATGCTACGGCTCAAAACAAGCGGCGCCAATGCCCAGGCGCCCTATCGGGTCGACTTCATCCTGCTCGAACACTTCTCGATGGCCAGTTTCACGGTGGC  >  NC_002947/3997163‑3997457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.