New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4140591 =	49 (0.770)	4 (0.070)	4/246	NT	8.8%	coding (219/597 nt)	PP_5609	hypothetical protein
	?	NC_002947	4140641 =	38 (0.650)					coding (269/597 nt)	PP_5609	hypothetical protein

ACAAGCCGGTGACCATGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACC  >  NC_002947/4140443‑4140738                                                                                                                                                     |                                                                                                                                                    aCAAGCCGGTGACCATGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTAGCGCCAACTGCTCGGAGCTGGGTGCCCGGATGGTCGAGCGCCTGACTGCTGCCATTggc                                                                                                                                                     >  8:161494/1‑149 (MQ=255)  gaaGCCGGTGTGCTTGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGGCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTggc                                                                                                                                                     <  8:144266/147‑1 (MQ=255)   aaGCCGGTGACCATGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTggcgg                                                                                                                                                   >  2:377488/1‑149 (MQ=255)    aGCCGGTGACCATGGTCGGCCTGGCCGGCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTggcggc                                                                                                                                                  <  2:151195/149‑1 (MQ=255)     gCCGGTGACCATGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGgcggcg                                                                                                                                                 >  3:154964/1‑149 (MQ=255)     gCCGGTGACCATGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCCGCCATTGgcggcg                                                                                                                                                 >  5:260079/1‑149 (MQ=255)          tcgggatctggatcgaagtgcctgggccgccgcgcttgttggtgaagctcagggtagctcttggcctgtaccgcctcgcgttagtggttgccgaagcgcagggtatggatcacggccgaggcttgctcgttttcgccatCGGCGCCGAc                                                                                                                                            <  1:294511‑M1/10‑1 (MQ=255)           tcgggatctggatcgcagtgcctgggccgccgggcttgttggggaagctcaggtagctcttggcctgtaccgcctcgcggtagtggttgccgaagcgcagggtatggatcacggccgaggcgtgctcgatttcgccatCGGCGCCGAc                                                                                                                                            >  2:294511‑M1/139‑148 (MQ=255)           gACCATGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGAc                                                                                                                                            >  5:185624/1‑148 (MQ=255)            aCCATGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGCGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACaa                                                                                                                                          <  1:103525/149‑1 (MQ=255)            aCCATGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACaa                                                                                                                                          <  3:352398/149‑1 (MQ=255)              cATGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGAc                                                                                                                                            >  3:4894/1‑145 (MQ=255)                tGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATc                                                                                                                                      <  2:122982/149‑1 (MQ=255)                  gTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGGTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGa                                                                                                                                    <  5:88583/149‑1 (MQ=255)                   tCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAg                                                                                                                                   <  7:10710/149‑1 (MQ=255)                     ggCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGc                                                                                                                                 <  1:3640/149‑1 (MQ=255)                           gCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACgg                                                                                                                           <  4:4894/149‑1 (MQ=255)                               cctgggccgccgcgcttgttggtgaagctcaggtagctcttggcctgtaccgcctcgcggtagtggttgccgaagcgcagggtatggatcacggccgaggcgtgctcgatttcgccatCGGCGCCGACAAGATCGAGGCCTACGGTAAg                                                                                                                       <  3:315474‑M1/31‑1 (MQ=255)                                 gtGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGgc                                                                                                                     >  1:313335/1‑149 (MQ=255)                                    aTCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGgccgc                                                                                                                  >  4:245957/1‑149 (MQ=255)                                     tCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGgccgcc                                                                                                                 <  3:69832/149‑1 (MQ=255)                                         gAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCcgtcg                                                                                                             >  4:132735/1‑149 (MQ=255)                                             ccATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCgg                                                                                                         >  7:31419/1‑149 (MQ=255)                                             ccATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAAATCGCGCCAACTGCTCGGAGCTGGCTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCgg                                                                                                         <  2:280686/149‑1 (MQ=255)                                                    gtgaagctcaggtagctcttggcctgtaccgcctcgcggtagtggttgccgaagcgcagggtatggatcacggccgaggcgtgctcgatttcgccatCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGAt                                                                                                  >  4:315474‑M1/98‑149 (MQ=255)                                                       gTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATg                                                                                                 <  3:156803/147‑1 (MQ=255)                                                       gTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATg                                                                                                 >  4:156803/1‑147 (MQ=255)                                                          gcgGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGa                                                                                             >  3:7096/1‑148 (MQ=255)                                                           tcaggtagctcttggcctgtaccgcctcgcggtagtggttgccgaagcgcagggtatggatcacggccgagacgtgctcgatttcgccatCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGc                                                                                               >  5:274885‑M1/91‑145 (MQ=255)                                                           tcaggtagctcttggcctgtaccgcctcgcggtagtggttgccgaagcgcagggtatggatcacggccgagacgtgctcgatttcgccatCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGc                                                                                               <  6:274885‑M1/55‑1 (MQ=255)                                                                tCGTTTAAGATCTGAAGCCGGAAATTCTCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGa                                                                                       <  6:45737/148‑1 (MQ=255)                                                                   ttGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCAc                                                                                   >  2:22799/1‑149 (MQ=255)                                                                   ttGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCAc                                                                                   <  6:185624/149‑1 (MQ=255)                                                                             gAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCg                                                                         >  8:226737/1‑149 (MQ=255)                                                                                gCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGa                                                                      <  1:22799/149‑1 (MQ=255)                                                                                 ccGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGAt                                                                     <  4:7096/149‑1 (MQ=255)                                                                                  cGGAAATTCGCGGCAACTGCTCGGAGGTGGGTGCCGTGCTTGTCGAGCGCCTGACTGCTGGCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATc                                                                    <  7:268268/149‑1 (MQ=255)                                                                                        ttCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATAcc                                                              <  7:226737/149‑1 (MQ=255)                                                                                                   tGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCgg                                                   >  2:260237/1‑149 (MQ=255)                                                                                                     cTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCgg                                                   <  4:154964/147‑1 (MQ=255)                                                                                                     cTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCgg                                                   <  3:132735/147‑1 (MQ=255)                                                                                                     cTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGc                                                  >  1:145129/1‑148 (MQ=255)                                                                                                      tCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCaa                                                >  3:329983/1‑149 (MQ=255)                                                                                                       cGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAAc                                               >  7:129367/1‑149 (MQ=255)                                                                                                           gCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCAc                                            <  8:129367/148‑1 (MQ=255)                                                                                                               ggTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTAc                                         <  1:377488/147‑1 (MQ=255)                                                                                                                   cccTGATGGTCGAGCGCCTGACTGCCGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAg                                   <  6:260079/149‑1 (MQ=255)                                                                                                                     cTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGccgccg                                                                                                                <  7:27666/70‑1 (MQ=255)                                                                                                                     cTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGccgccg                                                                                                                >  8:27666/1‑70 (MQ=255)                                                                                                                         tGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTa                             <  8:31419/149‑1 (MQ=255)                                                                                                                           gTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTa                             <  4:292941/147‑1 (MQ=255)                                                                                                                                   ccTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAg                                   <  4:100675/133‑1 (MQ=255)                                                                                                                                   ccTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAg                                   >  3:100675/1‑133 (MQ=255)                                                                                                                                   ccTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAaga                   <  2:145129/149‑1 (MQ=255)                                                                                                                                    cTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAagag                  >  3:182280/1‑149 (MQ=255)                                                                                                                                    cTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAagag                  >  6:61958/1‑149 (MQ=255)                                                                                                                                           ctgcCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTAcc             <  5:353313/147‑1 (MQ=255)                                                                                                                                           ctgcCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCt            >  7:160286/1‑148 (MQ=255)                                                                                                                                            tgcCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCt            >  6:171495/1‑147 (MQ=255)                                                                                                                                              ccATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGc        >  3:144426/1‑149 (MQ=255)                                                                                                                                              ccATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGc        >  4:84165/1‑149 (MQ=255)                                                                                                                                                    gcggcgCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCAcc  <  7:161494/149‑1 (MQ=255)                                                                                                                                                    gcggcgCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCAc   <  2:313335/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    ACAAGCCGGTGACCATGGTCGGCCTGGCCGTCGTGATCAAGAACCCATGGGCCGGTCGCGGTTTCGTTGAAGATCTGAAGCCGGAAATTCGCGCCAACTGCTCGGAGCTGGGTGCCCTGATGGTCGAGCGCCTGACTGCTGCCATTGGCGGCGCCGACAAGATCGAGGCCTACGGTAAGGCCGCCGTCGTCGGCGCCGATGGCGAAATCGAGCACGCCTCGGCCGTGATCCATACCCTGCGCTTCGGCAACCACTACCGCGAGGCGGTACAGGCCAAGAGCTACCTGAGCTTCACC  >  NC_002947/4140443‑4140738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.