New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4147675	48 (0.760)	4 (0.070)	4/254	NT	7.8%	coding (1758/2184 nt)	PP_3651	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 4147716	49 (0.810)					coding (1799/2184 nt)	PP_3651	two‑component system sensor histidine kinase/response regulator

TCTTCGACCCGTTCTTCACCACCAAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGCTCCTCGAGGACCACGGCTAC  >  NC_002947/4147527‑4147822                                                                                                                                                     |                                                                                                                                                    tCTTCGACCCGTTCTTCACCACCAAGGCCCCAGGAGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGCGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACACTGTATCTGCCG                                                                                                                                                     >  6:102105‑M1/1‑149 (MQ=255)   ttCGACCCGTTCTTCACCACCAAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTATAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGc                                                                                                                                                    >  7:292967/1‑148 (MQ=255)     cGACCCGTTCTTCACCACCAAGGCCCCAGGTGAAGGTACCGGGCTCGGGGTGTCGCAGGTGTTTGGTATCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCG                                                                                                                                                     <  7:339509‑M1/145‑1 (MQ=255)      gACCCGTTCTTCACCACCAAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAaga                                                                                                                                                <  3:49708/149‑1 (MQ=255)           gTTCTTCACCACCAAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGccc                                                                                                                                           <  4:53782/149‑1 (MQ=255)             cgatcACCACCAAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGcccc                                                                                                                                          <  3:18063/145‑1 (MQ=255)                tcACCACCAAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGgccgaggcgtcttcg                                                                                                                                      >  8:19006‑M1/1‑134 (MQ=255)                  accaccAAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTg                                                                                                                                     >  4:279853/1‑148 (MQ=255)                   ccaccaAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTg                                                                                                                                     >  3:167257/1‑147 (MQ=255)                       caAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAg                                                                                                                                  <  2:345607/146‑1 (MQ=255)                       caAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAg                                                                                                                                  >  1:345607/1‑146 (MQ=255)                          ggCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAagag                                                                                                                                               <  6:41636/130‑1 (MQ=255)                          ggCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAagag                                                                                                                                               >  5:41636/1‑130 (MQ=255)                            acccAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTATAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGccc                                                                                                                          <  8:292967/148‑1 (MQ=255)                             cccAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGccc                                                                                                                          >  5:124074/1‑148 (MQ=255)                              ccAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCg                                                                                                                         >  5:260068/1‑148 (MQ=255)                                 ggTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGa                                                                                                                     <  6:260068/149‑1 (MQ=255)                                   tGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACg                                                                                                                   <  4:355918/149‑1 (MQ=255)                                    gAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGc                                                                                                                  >  3:358618/1‑149 (MQ=255)                                            cGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCcg                                                                                                          <  6:45775‑M2/149‑3 (MQ=255)                                              ggCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGTGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCACCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCcgg                                                                                                         <  8:179359‑M2/148‑4 (MQ=255)                                                 tCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCGTTACCCTGTGTCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGcagc                                                                                                     >  6:124230/1‑149 (MQ=255)                                                   gggTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGgccgaggcgtcttcgggcgcggctgcagctggggcctcttgcggcagat                                                                                                    <  7:19006‑M1/148‑50 (MQ=255)                                                    ggTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGcagccag                                                                                                  >  2:109926/1‑149 (MQ=255)                                                     gTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGcagccagc                                                                                                 <  4:167257/149‑1 (MQ=255)                                                      ttGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCagccagcc                                                                                                <  7:225728/149‑1 (MQ=255)                                                           gCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAg                                                                                            <  8:74115/148‑1 (MQ=255)                                                           gCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAg                                                                                            <  5:102105/148‑1 (MQ=255)                                                             aGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCCGCCAGCCACAgg                                                                                           >  8:279101/1‑147 (MQ=255)                                                               gtgtTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTa                                                                                         >  3:183753/1‑147 (MQ=255)                                                                  tttGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAgg                                                                                                                                              >  4:178988/1‑91 (MQ=255)                                                                  tttGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAgg                                                                                                                                              <  3:178988/91‑1 (MQ=255)                                                                      gTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGgccgaggcgtcttcgggcgcggctgcagctggggcctcttgcggcagatacagg                                                                                               <  3:101358‑M1/134‑55 (MQ=255)                                                                      gTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGgccgaggcgtcttcgggagcggctgcagatggggcctctagcggcagatacagg                                                                                               >  4:101358‑M1/1‑80 (MQ=255)                                                                      gTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAg                                                                                >  8:86538/1‑149 (MQ=255)                                                                       tttCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAgc                                                                               <  6:124074/149‑1 (MQ=255)                                                                           gCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAgcggc                                                                            >  1:140146/1‑148 (MQ=255)                                                                               aGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGcgacg                                                                        >  3:130172/1‑148 (MQ=255)                                                                                    tCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACt                                                                  <  7:176396/149‑1 (MQ=255)                                                                                      cGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACtg                                                                 <  1:109926/148‑1 (MQ=255)                                                                                       gggggCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACtggt                                                               <  7:86538/149‑1 (MQ=255)                                                                                              aTGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTagaa                                                        <  4:183753/149‑1 (MQ=255)                                                                                                 tACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTAACTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTagaaga                                                      >  1:85463/1‑148 (MQ=255)                                                                                                     ggTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATc                                                 <  4:358618/149‑1 (MQ=255)                                                                                                          aCAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCATCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGAc                                            <  7:179359/149‑1 (MQ=255)                                                                                                              cATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGGCGCAAGAGGCCCCAGCTGCAGCCGCGGCGGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTgg                                        <  8:216017/149‑1 (MQ=255)                                                                                                                   ccGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGt                                   >  2:143229/1‑149 (MQ=255)                                                                                                                       ccAGGGCAACACTTTGGCCCTGTTTCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGTTGGTAGAAGACAATCCCGACCTGGGCAGTTTca                               <  1:135850/149‑1 (MQ=255)                                                                                                                         aGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGtt                                  <  5:136304/144‑1 (MQ=255)                                                                                                                         aGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGtt                                  >  6:136304/1‑144 (MQ=255)                                                                                                                            gCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCAcagct                          >  3:13899/1‑149 (MQ=255)                                                                                                                              accaccTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCAcagct                          >  6:371666/1‑147 (MQ=255)                                                                                                                                   cTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGctcc                   >  2:395596/1‑149 (MQ=255)                                                                                                                                         ccTGTATCTGCCGCTAGAGGCCCCATCTGCAGCCGCTCCCGAAGACGCCTCGGCcggcagatacagggtaaaggtggtgccctggccggggatgctgttcacctgtacatcgcccccggattgcttggcgaaac                            >  4:101358‑M2/1‑54 (MQ=255)                                                                                                                                         ccTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCcggcagatacagggtaaaggtggtgccctggccggggatgctgttcacctgtacatcgcccccggattgcttggcgaaac                            <  3:101358‑M2/134‑81 (MQ=255)                                                                                                                                         ccTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGCTCCTCGAg              >  5:173298/1‑148 (MQ=255)                                                                                                                                         ccTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGCTCCTCGAg              >  5:178306/1‑148 (MQ=255)                                                                                                                                          cTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGCTCCTCGAGGa            >  2:167570/1‑149 (MQ=255)                                                                                                                                           tGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGCTCCTCGAGGAc           >  6:45468/1‑149 (MQ=255)                                                                                                                                              aTCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCcggcagatacagggtaaaggtggtgccctggccggggatgctgttcacctgtacatcgcccccggattgcttggcgaaaccaaacacctgcgacaaccc         <  7:19006‑M2/148‑100 (MQ=255)                                                                                                                                               tCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGCTCCTCGAGGACCACg       >  3:77541/1‑149 (MQ=255)                                                                                                                                                 tGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGCTCCTCGAGGACCACGGc     >  6:69672/1‑149 (MQ=255)                                                                                                                                                   ccggccgaggcgtcttcgggcgcggctgcagctggtgcctcttgcggcagatacagggtaaaggtggtgccctggccggggatgctgttcacctgtacatcgccaccggattgcttggcgaaaccaaacacctgcgacaacccgagcc    <  8:179359‑M1/148‑146 (MQ=255)                                                                                                                                                   ccGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGCTCCTCGAGGACCACGGCTa   >  6:166261/1‑149 (MQ=255)                                                                                                                                                    cggccgaggcgtcttcgggcgcggctgcagctggggcctcttgcggcagatacagggtaaaggtggtgccctggccggggatgctgttcacctgtacatcgcccccggattgcttggcgaaaccaaacacctgcgacaacccgagcccg  <  6:45775‑M1/149‑148 (MQ=255)                                                                                                                                                    cGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGCTCCTCGAGGACCACGGCTAc  <  5:45775/149‑1 (MQ=255)                                                                                                                                                     gCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTgg                                        >  6:84216/1‑110 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TCTTCGACCCGTTCTTCACCACCAAGGCCCCAGGTGAAGGTACCGGGCTCGGGTTGTCGCAGGTGTTTGGTTTCGCCAAGCAATCCGGGGGCGATGTACAGGTGAACAGCATCCCCGGCCAGGGCACCACCTTTACCCTGTATCTGCCGCAAGAGGCCCCAGCTGCAGCCGCGCCCGAAGACGCCTCGGCCGGCAGCCAGCCACAGGTAGAGGGCGAGCGGCGACGAATACTGGTGGTAGAAGACAATCCCGACCTGGGCAGTTTCACAGCTCAGCTCCTCGAGGACCACGGCTAC  >  NC_002947/4147527‑4147822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.