New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4297999	73 (1.150)	4 (0.070)	4/254	NT	5.7%	coding (55/822 nt)	PP_3768	shikimate 5‑dehydrogenase
	?	NC_002947	= 4298031	63 (1.040)					coding (23/822 nt)	PP_3768	shikimate 5‑dehydrogenase

GGCATCGACACCCCGCAGCCGCGAATACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTG  >  NC_002947/4297851‑4298145                                                                                                                                                      |                                                                                                                                                   ggCATCGACACCCCGCAGCCGCGAATACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGG                                                                                                                                                    <  5:1118‑M1/149‑1 (MQ=255)    aTCGACACCCCGCAGCCGCGAATACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGc                                                                                                                                                  >  1:344629/1‑148 (MQ=255)          acCCCGCATCCGGGAATAGCCATGGAGGGGTTCCCTGCGACCGCCGCCGGCAGTTCATAGGTGCGCTTGGCCTTGTAGTAGAAGTGCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGGCGAAGGTG‑CGGGGGCGACCGGc                                                                                                                                           <  6:47699/149‑1 (MQ=255)            cccGCAGCCGCGAATACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCa                                                                                                                                         <  2:23755/149‑1 (MQ=255)            cccGCAGCCGCGAATACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCa                                                                                                                                         <  6:377390/149‑1 (MQ=255)                cAGCCGCGAATACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCagaga                                                                                                                                     <  2:271731/149‑1 (MQ=255)                    cgcgAATACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCATCTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATg                                                                                                                                 >  5:319086/1‑149 (MQ=255)                     gcgAATACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATg                                                                                                                                 >  3:91627/1‑148 (MQ=255)                        aaTACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCaaa                                                                                                                             <  2:315760/149‑1 (MQ=255)                         aTACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCGTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGGGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAg                                                                                                                            >  7:163154/1‑149 (MQ=255)                             ccAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGacaccgtgctttgcatctctctggccgg                                                                                                                        >  5:77638‑M1/1‑121 (MQ=255)                             ccAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCAAGAGAGATGCAAAGCACg                                                                                                                        >  8:115752/1‑149 (MQ=255)                             ccAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTCGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACg                                                                                                                        >  2:34909/1‑149 (MQ=255)                             ccAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGACCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACg                                                                                                                        >  3:245107/1‑149 (MQ=255)                               aGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGgt                                                                                                                      <  8:263660/149‑1 (MQ=255)                                    gcgGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTccc                                                                                                                 <  6:216558‑M2/149‑4 (MQ=255)                                     cgGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGacaccgtgctttgcatctctctggccggtcgccccg                                                                                                                <  6:77638‑M1/149‑37 (MQ=255)                                     cgGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCTCGGTGTcccg                                                                                                                <  7:298746‑M2/149‑5 (MQ=255)                                         tCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTg                                                                                                            <  5:216558/149‑1 (MQ=255)                                           ccagCCACCGCCGCCGGCAGGTCCTCGGTGCGCATGGCCTTGTACTAGAAGTCCACGCCCAACTGCGGGTACAGGTGGGTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTgg                                                                                                           <  4:115017/145‑1 (MQ=255)                                           ccTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTGTCCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTg                                                                                                            <  1:80374/148‑1 (MQ=255)                                           ccTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGacaccgtgctttgcatctctctggccggtcgccccggcacct                                                                                                          <  1:340307‑M1/149‑43 (MQ=255)                                           ccTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTgg                                                                                                           <  2:330239/148‑1 (MQ=255)                                            cTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGgt                                                                                                                      <  7:76123/136‑1 (MQ=255)                                            cTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGgt                                                                                                                      >  8:76123/1‑136 (MQ=255)                                            cTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGa                                                                                                         <  5:297460/149‑1 (MQ=255)                                            cTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGa                                                                                                         <  3:173329/149‑1 (MQ=255)                                              gCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACAGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTgggta                                                                                                        >  8:314644/1‑146 (MQ=255)                                                cACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGacaccgtgctttgcatctctctggccggtcgccccggcaccttcggc                                                                                                     <  5:309584‑M1/149‑48 (MQ=255)                                                 aCCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGt                                                                                                    >  1:196540/1‑149 (MQ=255)                                                    gccgccgGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTCGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCTAAGCACGGTGTCCCGGCTGGGAGTTGTCgg                                                                                                 <  1:34909/149‑1 (MQ=255)                                                       gccgGCAGGTCATCGGTGCGCATGACCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCAt                                                                                              <  4:245107/149‑1 (MQ=255)                                                           gCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACa                                                                                          <  2:244164/149‑1 (MQ=255)                                                               gTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCt                                                                                      >  5:221183/1‑149 (MQ=255)                                                               agggtCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGc                                                                                       <  4:352163/144‑1 (MQ=255)                                                                  aTCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCt                                                                                   >  3:195448/1‑149 (MQ=255)                                                                     ggTGCGCATGGCCTTGTAGTAGTAGTCCAGGCCCATCTGCTGGTTAAGGTGGTTGTGAATGCGCAGGGCGAAGGTG‑GCGGGGCGACCGGCCAGAGATATGCAAAGCTCGGTGTGCCGGCTGGTAGTTGACTGCATAACAGGCTCCTTgg                                                                                <  5:290103/149‑1 (MQ=255)                                                                       tGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAACCGCACGCCGAAGGTG‑CCGGCGCGACCGGCCAGAGAGATGCAAAGCTCGGTGTCCCTGCTGGGATTTGTCGGCATAACTGGCTCCTTGGTc                                                                              <  4:246504/149‑1 (MQ=255)                                                                           cATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCGGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGGCGGCATAACAGGCGCCGTGGTCATgc                                                                          >  4:255398/1‑148 (MQ=255)                                                                            aTGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGAc                                                                         >  8:127599/1‑149 (MQ=255)                                                                                 cTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGCTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGaa                                                                     >  1:155055/1‑148 (MQ=255)                                                                                  ttGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAAc                                                                   >  3:18131/1‑149 (MQ=255)                                                                                    gtagtaGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAAc                                                                   <  4:91627/147‑1 (MQ=255)                                                                                    gtagtaGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGt                                                                 >  7:123141/1‑149 (MQ=255)                                                                                     tagtagAAGTCCAGGCCCATCTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGtt                                                                <  6:319086/149‑1 (MQ=255)                                                                                     tagtagAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCTCGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGtt                                                                <  8:298746/149‑1 (MQ=255)                                                                                     tagtagAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGtt                                                                <  2:344629/149‑1 (MQ=255)                                                                                         agAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTAt                                                             <  6:221183/148‑1 (MQ=255)                                                                                          gAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTAtt                                                            <  7:127599/148‑1 (MQ=255)                                                                                           aaGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGa                                                                          <  7:130400/133‑1 (MQ=255)                                                                                           aaGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGa                                                                          >  8:130400/1‑133 (MQ=255)                                                                                             gTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGc                                                        <  8:123141/149‑1 (MQ=255)                                                                                              tCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCaga                                                                                                                                       >  5:43724/1‑69 (MQ=255)                                                                                              tCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCaga                                                                                                                                       <  6:43724/69‑1 (MQ=255)                                                                                                   gCCCAACTTCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACa                                                  <  8:100158/149‑1 (MQ=255)                                                                                                   gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGa                                                                                                         >  8:213787/1‑94 (MQ=255)                                                                                                   gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGa                                                                                                         <  7:213787/94‑1 (MQ=255)                                                                                                   gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAAGAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTaa                                                    >  5:332828/1‑147 (MQ=255)                                                                                                   gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGc                                                        >  8:245478/1‑143 (MQ=255)                                                                                                   gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGc                                                        <  7:245478/143‑1 (MQ=255)                                                                                                   gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACa                                                  <  1:66657/149‑1 (MQ=255)                                                                                                     ccAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACaga                                                <  8:352021/149‑1 (MQ=255)                                                                                                     ccAACTACTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACa                                                  >  2:167616/1‑147 (MQ=255)                                                                                                       aaCTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGACATGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGt                                              >  5:126003/1‑149 (MQ=255)                                                                                                         ctgctgGTACAGGTGGTTGTGAAAGCGCACGCCGAATGTG‑GCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCa                                            <  7:115752/149‑1 (MQ=255)                                                                                                            ctgGTACAGGTGGTTTTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGc                                          >  1:369358/1‑148 (MQ=255)                                                                                                            ctgGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGc                                          <  3:12306/148‑1 (MQ=255)                                                                                                                   aGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGgtc                                  <  2:369358/149‑1 (MQ=255)                                                                                                                         ttGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCt                            >  7:71819/1‑149 (MQ=255)                                                                                                                           gtgAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTa                          >  4:90439/1‑149 (MQ=255)                                                                                                                            tgAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTa                          <  3:90439/148‑1 (MQ=255)                                                                                                                             gacaGCGCACGCCGAAGGGT‑CCGGGGCGACCTGCCATAGAGTTGCCAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGACTCAGCCACTGGTCGGCCCTTaca                        <  8:163154/146‑1 (MQ=255)                                                                                                                             gAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTaca                        >  6:312103/1‑149 (MQ=255)                                                                                                                              aaaGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTaca                        >  1:237240/1‑148 (MQ=255)                                                                                                                              aaaGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTAGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTaca                        >  1:292219/1‑148 (MQ=255)                                                                                                                                aGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTGCGTTACCCaa                     >  2:372619/1‑149 (MQ=255)                                                                                                                                   gcACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCt                  >  4:14094/1‑149 (MQ=255)                                                                                                                                   gcACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCt                  >  2:325493/1‑149 (MQ=255)                                                                                                                                       gCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTcccggcaccttcggcgtgcgctttcacaaccacctgtaccagcagttgggcctggacttctactacaaggccatgcgcaccgatgacctgccggcggcggtg              <  5:309584‑M2/149‑103 (MQ=255)                                                                                                                                            aGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTcccggcaccttcggcgtgcgctttcacaaccacctgtaccagcagttgggcctggacttctactacaaggccatgcgcaccgatgacctgccggcggcggtggcagg         <  1:340307‑M2/149‑108 (MQ=255)                                                                                                                                               tG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTcccc      >  5:12208/1‑149 (MQ=255)                                                                                                                                                g‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTc         >  7:144766/1‑145 (MQ=255)                                                                                                                                                g‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTc         <  8:144766/145‑1 (MQ=255)                                                                                                                                                   cGGGacaccgagctttgcatctctctggccggtcgccccggcaccttcggcgtgcgctttcacaaccacctgtaccagcagttgggcctggacttctactacaaggccatgcgcaccgatgacctgccggcggcggtggcagggatccg   <  7:298746‑M1/149‑146 (MQ=255)                                                                                                                                                   cGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTcccggcaccttcggcgtgcgctttcacaaccacctgtaccagcagttgggcctggacttctactacaaggccatgcgcaccgatgacctgccggcggcggtggcagggatccg   <  6:77638‑M2/149‑114 (MQ=255)                                                                                                                                                   cGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCtgt   <  6:12208/149‑1 (MQ=255)                                                                                                                                                    gggacaccgtgctttgcatctctctggccggtcgccccggcaccttcggcgtgcgctttcacaaccacctgtaccagcagttgggcctggacttctactacaaggccatgcgcaccgatgacctgccggcggcggtggcagggatccgc  <  6:216558‑M1/149‑147 (MQ=255)                                                                                                                                                      |                                                                                                                                                   GGCATCGACACCCCGCAGCCGCGAATACCCAGGGCGCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTG  >  NC_002947/4297851‑4298145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.