New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4297999	73 (1.150)	4 (0.070)	4/254	NT	5.7%	coding (55/822 nt)	PP_3768	shikimate 5‑dehydrogenase
	?	NC_002947	= 4298031	63 (1.040)					coding (23/822 nt)	PP_3768	shikimate 5‑dehydrogenase

GCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCGGAGTCATAGTAACAGG  >  NC_002947/4297886‑4298179                                                                                                                                                   |                                                                                                                                                     gcgGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTccc                                                                                                                                                   <  6:216558‑M2/149‑4 (MQ=255)  cgGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCTCGGTGTcccg                                                                                                                                                  <  7:298746‑M2/149‑5 (MQ=255)      tCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTg                                                                                                                                              <  5:216558/149‑1 (MQ=255)        ccagCCACCGCCGCCGGCAGGTCCTCGGTGCGCATGGCCTTGTACTAGAAGTCCACGCCCAACTGCGGGTACAGGTGGGTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTgg                                                                                                                                             <  4:115017/145‑1 (MQ=255)        ccTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTGTCCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTg                                                                                                                                              <  1:80374/148‑1 (MQ=255)        ccTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTgg                                                                                                                                             <  2:330239/148‑1 (MQ=255)         cTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGa                                                                                                                                           <  3:173329/149‑1 (MQ=255)         cTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGa                                                                                                                                           <  5:297460/149‑1 (MQ=255)           gCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACAGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTgggta                                                                                                                                          >  8:314644/1‑146 (MQ=255)              aCCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGt                                                                                                                                      >  1:196540/1‑149 (MQ=255)                 gccgccgGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTCGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCTAAGCACGGTGTCCCGGCTGGGAGTTGTCgg                                                                                                                                   <  1:34909/149‑1 (MQ=255)                    gccgGCAGGTCATCGGTGCGCATGACCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCAt                                                                                                                                <  4:245107/149‑1 (MQ=255)                        gCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACa                                                                                                                            <  2:244164/149‑1 (MQ=255)                            gTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCt                                                                                                                        >  5:221183/1‑149 (MQ=255)                            agggtCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGc                                                                                                                         <  4:352163/144‑1 (MQ=255)                               aTCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCt                                                                                                                     >  3:195448/1‑149 (MQ=255)                                  ggTGCGCATGGCCTTGTAGTAGTAGTCCAGGCCCATCTGCTGGTTAAGGTGGTTGTGAATGCGCAGGGCGAAGGTG‑GCGGGGCGACCGGCCAGAGATATGCAAAGCTCGGTGTGCCGGCTGGTAGTTGACTGCATAACAGGCTCCTTgg                                                                                                                  <  5:290103/149‑1 (MQ=255)                                    tGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAACCGCACGCCGAAGGTG‑CCGGCGCGACCGGCCAGAGAGATGCAAAGCTCGGTGTCCCTGCTGGGATTTGTCGGCATAACTGGCTCCTTGGTc                                                                                                                <  4:246504/149‑1 (MQ=255)                                        cATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCGGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGGCGGCATAACAGGCGCCGTGGTCATgc                                                                                                            >  4:255398/1‑148 (MQ=255)                                         aTGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGAc                                                                                                           >  8:127599/1‑149 (MQ=255)                                              cTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGCTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGaa                                                                                                       >  1:155055/1‑148 (MQ=255)                                               ttGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAAc                                                                                                     >  3:18131/1‑149 (MQ=255)                                                 gtagtaGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAAc                                                                                                     <  4:91627/147‑1 (MQ=255)                                                 gtagtaGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGt                                                                                                   >  7:123141/1‑149 (MQ=255)                                                  tagtagAAGTCCAGGCCCATCTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGtt                                                                                                  <  6:319086/149‑1 (MQ=255)                                                  tagtagAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCTCGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGtt                                                                                                  <  8:298746/149‑1 (MQ=255)                                                  tagtagAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGtt                                                                                                  <  2:344629/149‑1 (MQ=255)                                                      agAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTAt                                                                                               <  6:221183/148‑1 (MQ=255)                                                       gAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTAtt                                                                                              <  7:127599/148‑1 (MQ=255)                                                        aaGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGa                                                                                                            >  8:130400/1‑133 (MQ=255)                                                        aaGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGa                                                                                                            <  7:130400/133‑1 (MQ=255)                                                          gTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGc                                                                                          <  8:123141/149‑1 (MQ=255)                                                                gCCCAACTTCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACa                                                                                    <  8:100158/149‑1 (MQ=255)                                                                gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGa                                                                                                                                           <  7:213787/94‑1 (MQ=255)                                                                gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGa                                                                                                                                           >  8:213787/1‑94 (MQ=255)                                                                gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAAGAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTaa                                                                                      >  5:332828/1‑147 (MQ=255)                                                                gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGc                                                                                          >  8:245478/1‑143 (MQ=255)                                                                gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGc                                                                                          <  7:245478/143‑1 (MQ=255)                                                                gCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACa                                                                                    <  1:66657/149‑1 (MQ=255)                                                                  ccAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACaga                                                                                  <  8:352021/149‑1 (MQ=255)                                                                  ccAACTACTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACa                                                                                    >  2:167616/1‑147 (MQ=255)                                                                    aaCTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGACATGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGt                                                                                >  5:126003/1‑149 (MQ=255)                                                                      ctgctgGTACAGGTGGTTGTGAAAGCGCACGCCGAATGTG‑GCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCa                                                                              <  7:115752/149‑1 (MQ=255)                                                                         ctgGTACAGGTGGTTTTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGc                                                                            >  1:369358/1‑148 (MQ=255)                                                                         ctgGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGc                                                                            <  3:12306/148‑1 (MQ=255)                                                                                aGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGgtc                                                                    <  2:369358/149‑1 (MQ=255)                                                                                      ttGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCt                                                              >  7:71819/1‑149 (MQ=255)                                                                                        gtgAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTa                                                            >  4:90439/1‑149 (MQ=255)                                                                                         tgAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTa                                                            <  3:90439/148‑1 (MQ=255)                                                                                          gacaGCGCACGCCGAAGGGT‑CCGGGGCGACCTGCCATAGAGTTGCCAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGACTCAGCCACTGGTCGGCCCTTaca                                                          <  8:163154/146‑1 (MQ=255)                                                                                          gAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTaca                                                          >  6:312103/1‑149 (MQ=255)                                                                                           aaaGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTaca                                                          >  1:237240/1‑148 (MQ=255)                                                                                           aaaGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTAGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTaca                                                          >  1:292219/1‑148 (MQ=255)                                                                                             aGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTGCGTTACCCaa                                                       >  2:372619/1‑149 (MQ=255)                                                                                                gcACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCt                                                    >  4:14094/1‑149 (MQ=255)                                                                                                gcACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCt                                                    >  2:325493/1‑149 (MQ=255)                                                                                                    gCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTcccggcaccttcggcgtgcgctttcacaaccacctgtaccagcagttgggcctggacttctactacaaggccatgcgcaccgatgacctgccggcggcggtg                                                <  5:309584‑M2/149‑103 (MQ=255)                                                                                                         aGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTcccggcaccttcggcgtgcgctttcacaaccacctgtaccagcagttgggcctggacttctactacaaggccatgcgcaccgatgacctgccggcggcggtggcagg                                           <  1:340307‑M2/149‑108 (MQ=255)                                                                                                            tG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTcccc                                        >  5:12208/1‑149 (MQ=255)                                                                                                             g‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTc                                           >  7:144766/1‑145 (MQ=255)                                                                                                             g‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTc                                           <  8:144766/145‑1 (MQ=255)                                                                                                                cGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTcccggcaccttcggcgtgcgctttcacaaccacctgtaccagcagttgggcctggacttctactacaaggccatgcgcaccgatgacctgccggcggcggtggcagggatccg                                     <  6:77638‑M2/149‑114 (MQ=255)                                                                                                                cGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCtgt                                     <  6:12208/149‑1 (MQ=255)                                                                                                                        ccGGCCAGAGAGATGCAAAGCACGGTGTcccggcaccttcggcgtgcgctttcacaaccacctgtaccagcagttgggcctggacttctactacaaggccatgcgcaccgatgacctgccggcggcggtggcagggatccgcgccctgg                             >  5:77638‑M2/1‑28 (MQ=255)                                                                                                                          ggCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGa                           <  3:13627/149‑1 (MQ=255)                                                                                                                           gCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGAc                          <  5:312103/149‑1 (MQ=255)                                                                                                                                agagaTGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTGCCGTTACCCTGTGCTCAGCTGACAGAgg                     >  3:270560/1‑149 (MQ=255)                                                                                                                                agagaTGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAgg                     >  3:317833/1‑149 (MQ=255)                                                                                                                                   gaTGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCg                  <  6:332828/149‑1 (MQ=255)                                                                                                                                    aTGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTGTATTCAGCGTAACAGAGTCAGCCACAGGTCGTCCCTTACACACACTTTACCGTTCCCCTGTGCTCAGCTGCCAGAGGCCg                  >  8:223396/1‑148 (MQ=255)                                                                                                                                     tGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCg                  >  1:103245/1‑147 (MQ=255)                                                                                                                                     tGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCGGa                <  4:195448/149‑1 (MQ=255)                                                                                                                                      gCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCGGAg               >  1:133309/1‑149 (MQ=255)                                                                                                                                      gCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCGGAg               >  3:61306/1‑149 (MQ=255)                                                                                                                                        aaaGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTAAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCTGCTGACTGTGGCCGGAGt              >  7:257783/1‑148 (MQ=255)                                                                                                                                         aaGCACCGTGTCCCGGCTTGGAGTTTGCGGCATAACAGGCTCCTTTGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCGGAGTCa            <  8:257783/149‑1 (MQ=255)                                                                                                                                           gCACGGTGTCCCGGCTGGTAGATGTAGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCGGAGTCATa          <  2:292219/149‑1 (MQ=255)                                                                                                                                           gCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCGGAGTCATa          >  3:283354/1‑149 (MQ=255)                                                                                                                                                   tCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCGGAGTCATAGTAACAgg  <  4:18131/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     GCGGATCCCTGCCACCGCCGCCGGCAGGTCATCGGTGCGCATGGCCTTGTAGTAGAAGTCCAGGCCCAACTGCTGGTACAGGTGGTTGTGAAAGCGCACGCCGAAGGTG‑CCGGGGCGACCGGCCAGAGAGATGCAAAGCACGGTGTCCCGGCTGGGAGTTGTCGGCATAACAGGCTCCTTGGTCATGACTGAAACGTTTATTCAGCGTAACAGAGTCAGCCACTGGTCGTCCCTTACACAACCTTTACCGTTCCCCTGTGCTCAGCTGACAGAGGCCGGAGTCATAGTAACAGG  >  NC_002947/4297886‑4298179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.