New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4561192 = | 49 (0.770) | 3 (0.050) | 3/252 | NT | 6.1% | coding (357/1404 nt) | PP_4048 | hypothetical protein |
? | NC_002947 | 4561273 = | 46 (0.760) | coding (276/1404 nt) | PP_4048 | hypothetical protein |
ACCTGACCTGGTGCAGCCAGAACTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTA > NC_002947/4561044‑4561338 | gctgctgtcgttggtgccgggggtggtgattgtgctcagtgcccgtgacctggctgcggtgtgcctgcgcctgggcaagcgctacgcggcggacggcagccaggcaacgccgcagccgccggaatggcaagagtgggtgttgctggtgg < 7:98395‑M1/1‑1 (MQ=255) ctgacctgGTGCAGCCAGAACTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGcc > 1:290601/1‑149 (MQ=255) tgacctgGTGCAGCCAGAACTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCt > 2:32304/1‑149 (MQ=255) gTGCAGCCAGAACTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCAt < 7:225502/147‑1 (MQ=255) tGCAGCCAGAACTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGa < 4:140977/149‑1 (MQ=255) gCCAGAACTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCCCGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCGGCCATCGAGccc > 8:120985/1‑149 (MQ=255) gCCAGAACTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGcc > 1:352307/1‑148 (MQ=255) gAACTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACgg < 2:290601/149‑1 (MQ=255) gAACTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACgg < 1:336156/149‑1 (MQ=255) aCTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGATCGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGa < 1:374973/149‑1 (MQ=255) aCTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGa < 3:308961/149‑1 (MQ=255) tCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGt > 1:283374/1‑149 (MQ=255) ccACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTg < 2:90928/149‑1 (MQ=255) cACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTg < 5:181744/148‑1 (MQ=255) ccGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCAcc < 5:105765/147‑1 (MQ=255) aaCTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCccacca > 1:110053/1‑148 (MQ=255) gCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAgcgc > 8:304411/1‑149 (MQ=255) gCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAgc < 7:326091/147‑1 (MQ=255) cGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCCACCACAGCGcc > 8:116516/1‑149 (MQ=255) gagaAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCga > 4:175352/1‑149 (MQ=255) agaAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCgat > 5:124267/1‑149 (MQ=255) gCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCgg > 5:331441/1‑149 (MQ=255) gCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCgg > 3:362520/1‑149 (MQ=255) aaCCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGgcg < 7:304411/149‑1 (MQ=255) cACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTCCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGa < 1:213164/149‑1 (MQ=255) tCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCGACCACAGCGCCGATGATCGGCGCGATCAgg < 1:32304/149‑1 (MQ=255) tCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATc > 3:56731/1‑137 (MQ=255) tCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATc < 4:56731/137‑1 (MQ=255) tCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAgg < 3:175352/149‑1 (MQ=255) tCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAgg < 6:331441/149‑1 (MQ=255) tCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAgg < 2:283374/149‑1 (MQ=255) cctgggcaagcgctacgcggcggacggcagccaggcaacgccgcagccgccggaatggcaagagtgggtgttgctggtgGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGt < 2:178762‑M1/69‑1 (MQ=255) gATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGtcatca < 5:248777/149‑1 (MQ=255) ccTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcag > 6:77626/1‑149 (MQ=255) cgctacgcggcggacggcagccaggcaacgccgcagccgccggaatggcaagagtgggtgttgctggtgGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcagg > 1:178762‑M1/70‑149 (MQ=255) cTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATcaggcag < 7:116516/149‑1 (MQ=255) gctacgctgcggacggcagccaggcaacgccgcagccgccggaatggcaagagtgggtgttgctggtgGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCaggcaggc > 8:81879‑M1/69‑149 (MQ=255) cTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccac < 6:124267/149‑1 (MQ=255) aCGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGc > 5:63423/1‑148 (MQ=255) aCGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGc < 5:77626/148‑1 (MQ=255) aCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCAc > 5:377789/1‑149 (MQ=255) cacaAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCa > 6:117727/1‑149 (MQ=255) caAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccacca > 5:273772/1‑128 (MQ=255) caAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccacca < 6:273772/128‑1 (MQ=255) aaaCCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTc > 2:198308/1‑149 (MQ=255) gCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCggcggc > 3:321039/1‑149 (MQ=255) ctgctgctTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGtt < 4:321039/149‑1 (MQ=255) ctTCCTGCCCCCCCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGGCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTg < 7:120985/148‑1 (MQ=255) ccTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGcgt > 5:110825/1‑147 (MQ=255) ccTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCt < 6:63423/148‑1 (MQ=255) tGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGcc > 6:327352/1‑149 (MQ=255) cccAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGt > 5:44308/1‑149 (MQ=255) aaCCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccg > 1:189728/1‑149 (MQ=255) cAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCCGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccgccg > 6:57739/1‑149 (MQ=255) cAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccgccg > 5:217478/1‑149 (MQ=255) aGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCcgccgc < 4:362520/149‑1 (MQ=255) gTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCcgcg < 1:198308/149‑1 (MQ=255) cgcCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTa < 2:110053/148‑1 (MQ=255) | ACCTGACCTGGTGCAGCCAGAACTCCACGCTGCCGCGGGTGAACTTGCCGAGAAACGCAACCACTGTCTGCAGGATGACCTGACTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCG‑CCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTA > NC_002947/4561044‑4561338 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |