New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4561192 = | 49 (0.770) | 3 (0.050) | 3/252 | NT | 6.1% | coding (357/1404 nt) | PP_4048 | hypothetical protein |
? | NC_002947 | 4561273 = | 46 (0.760) | coding (276/1404 nt) | PP_4048 | hypothetical protein |
CTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGCACAATCACCACCCCCGGCACCAACGACAGCAGC > NC_002947/4561127‑4561420 | cTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccac < 6:124267/149‑1 (MQ=255) aCGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGc < 5:77626/148‑1 (MQ=255) aCGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGc > 5:63423/1‑148 (MQ=255) aCAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCAc > 5:377789/1‑149 (MQ=255) cacaAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCa > 6:117727/1‑149 (MQ=255) caAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccacca > 5:273772/1‑128 (MQ=255) caAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGccacca < 6:273772/128‑1 (MQ=255) aaaCCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTc > 2:198308/1‑149 (MQ=255) gCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCggcggc > 3:321039/1‑149 (MQ=255) ctgctgctTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGtt < 4:321039/149‑1 (MQ=255) ctTCCTGCCCCCCCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGGCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTg < 7:120985/148‑1 (MQ=255) ccTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGcgt > 5:110825/1‑147 (MQ=255) ccTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCt < 6:63423/148‑1 (MQ=255) tGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGcc > 6:327352/1‑149 (MQ=255) cccAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGt > 5:44308/1‑149 (MQ=255) aaCCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccg > 1:189728/1‑149 (MQ=255) cAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCCGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccgccg > 6:57739/1‑149 (MQ=255) cAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccgccg > 5:217478/1‑149 (MQ=255) aGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCcgccgc < 4:362520/149‑1 (MQ=255) gTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCcgcg < 1:198308/149‑1 (MQ=255) cgcCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTa < 2:110053/148‑1 (MQ=255) gcctgcctgatgaccctgatcgcgccgatcatcggcgctgtggtgggggcggtgggcactcccgtgggctcgatggcaggcCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCAGCGTAgc > 8:81879‑M2/82‑149 (MQ=255) cctgcctgatgaccctgatcgcgccgatcatcggcgctgtggtgggggcggtgggcactcccgtgggctcgatggcaggcCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAgcg > 1:178762‑M2/81‑149 (MQ=255) CTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAgcgc < 6:360671‑M1/149‑1 (MQ=255) TGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCt < 6:62754‑M1/149‑1 (MQ=255) CCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCtt > 5:117727‑M1/1‑148 (MQ=255) aTCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccgccg > 1:182443/1‑136 (MQ=255) aTCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTccgccg < 2:182443/136‑1 (MQ=255) gAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCa < 6:377789/148‑1 (MQ=255) gCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGgc < 5:62754/149‑1 (MQ=255) accctgatcgcgccgatcatcggcgctgtggtgggggcggtgggcactcccgtgggctcgatggcaggcCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAgg < 2:178762‑M2/79‑1 (MQ=255) cACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGgcg > 5:363520/1‑147 (MQ=255) cACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCa < 5:360671/149‑1 (MQ=255) gggAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGc < 2:189728/149‑1 (MQ=255) ccACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCg > 3:129845/1‑147 (MQ=255) ccACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCa < 4:129845/149‑1 (MQ=255) ccACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCGGCGGCGTTGCCTGGCGGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCa < 1:260495/149‑1 (MQ=255) ccACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCACCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTgcg < 6:356168/93‑1 (MQ=255) ccACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCACCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTgcg > 5:356168/1‑93 (MQ=255) aCCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGc > 2:264616/1‑149 (MQ=255) cGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCa < 6:363520/149‑1 (MQ=255) cGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCa < 6:44308/149‑1 (MQ=255) cccACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCCGGCACACCGCAGCCAGGt > 6:327734/1‑148 (MQ=255) cccACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGt > 4:20750/1‑148 (MQ=255) accacAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACg > 5:306539/1‑149 (MQ=255) ccacAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACgg < 5:327352/149‑1 (MQ=255) cacaGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACggg < 6:217478/149‑1 (MQ=255) cgcCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACt > 3:197544/1‑148 (MQ=255) gcCGATCATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCa > 6:325298/1‑119 (MQ=255) gcCGATCATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCa < 5:325298/119‑1 (MQ=255) gatgatCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGc > 5:356547/1‑129 (MQ=255) gatgatCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGc < 6:356547/129‑1 (MQ=255) gatgatCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGca > 7:347884/1‑149 (MQ=255) tgatCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGcac > 3:305635/1‑148 (MQ=255) tCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCAATTCCGGCGGCTCCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGAGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGCACAAt > 7:239246/1‑148 (MQ=255) atcaGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGt < 2:228348/112‑1 (MQ=255) atcaGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGCACAATCACCACCCCCGGCACCaa > 8:98395/1‑149 (MQ=255) atcaGGCAGGCCACCAGCAACACACACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCAGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGt > 1:228348/1‑112 (MQ=255) cCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGCACAATCACCACCCCCGGCACCAACGACagcagc < 7:98395‑M2/148‑1 (MQ=255) | CTTTCACGTATCAACAGCAAGCACAAACCACGCAAGAACGCTGCTGCTTCCTGCCCAACCAGTGCGCCTGCCATCGAGCCCACGGGAGTGCCCACCGCCCCCACCACAGCGCCGATGATCGGCGCGATCAGGGTCATCAGGCAGGCCACCAGCAACACCCACTCTTGCCATTCCGGCGGCTGCGGCGTTGCCTGGCTGCCGTCCGCCGCGTAGCGCTTGCCCAGGCGCAGGCACACCGCAGCCAGGTCACGGGCACTGAGCACAATCACCACCCCCGGCACCAACGACAGCAGC > NC_002947/4561127‑4561420 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |